RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 CFDP1Q9UEE9 299 aaPredicted RBP33.22■■■□□ 2.91
HMGA2-206ENST00000536545 CHIC2Q9UKJ5 165 aa33.21■■■□□ 2.91
HMGA2-206ENST00000536545 KDM6BO15054 1643 aa33.2■■■□□ 2.91
HMGA2-206ENST00000536545 CROCC2H7BZ55 1655 aa33.2■■■□□ 2.91
HMGA2-206ENST00000536545 UHRF1BP1LA0JNW5 1464 aa33.19■■■□□ 2.9
HMGA2-206ENST00000536545 RRP7BPQ9NSQ0 103 aa33.19■■■□□ 2.9
HMGA2-206ENST00000536545 ADGBQ8N7X0 1667 aa33.15■■■□□ 2.9
HMGA2-206ENST00000536545 PREX2Q70Z35 1606 aa33.12■■■□□ 2.89
HMGA2-206ENST00000536545 ADGRL2O95490 1459 aa33.1■■■□□ 2.89
HMGA2-206ENST00000536545 ZCCHC11Q5TAX3 1644 aaKnown RBP33.09■■■□□ 2.89
HMGA2-206ENST00000536545 KDM5BQ9UGL1 1544 aa33.08■■■□□ 2.89
HMGA2-206ENST00000536545 TTC37Q6PGP7 1564 aa33.06■■■□□ 2.88
HMGA2-206ENST00000536545 SHANK2Q9UPX8 1470 aa33.05■■■□□ 2.88
HMGA2-206ENST00000536545 CDC42BPBQ9Y5S2 1711 aa33.04■■■□□ 2.88
HMGA2-206ENST00000536545 SIN3AQ96ST3 1273 aa33.04■■■□□ 2.88
HMGA2-206ENST00000536545 DIEXFQ68CQ4 756 aaKnown RBP33.04■■■□□ 2.88
HMGA2-206ENST00000536545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.03■■■□□ 2.88
HMGA2-206ENST00000536545 ZNF777Q9ULD5 760 aaPredicted RBP33.03■■■□□ 2.88
HMGA2-206ENST00000536545 DENND4BO75064 1496 aaPredicted RBP33.03■■■□□ 2.88
HMGA2-206ENST00000536545 ARHGEF5Q12774 1597 aa33.01■■■□□ 2.88
HMGA2-206ENST00000536545 TIMELESSQ9UNS1 1208 aa33.01■■■□□ 2.87
HMGA2-206ENST00000536545 NCOA1Q15788 1441 aa33■■■□□ 2.87
HMGA2-206ENST00000536545 SAMD9LQ8IVG5 1584 aa33■■■□□ 2.87
HMGA2-206ENST00000536545 ACIN1Q9UKV3 1341 aaKnown RBP32.98■■■□□ 2.87
HMGA2-206ENST00000536545 NEUROD1Q13562 356 aa32.94■■■□□ 2.86
HMGA2-206ENST00000536545 MYO5CQ9NQX4 1742 aa32.94■■■□□ 2.86
HMGA2-206ENST00000536545 MBD5Q9P267 1494 aa32.93■■■□□ 2.86
HMGA2-206ENST00000536545 C9orf84Q5VXU9 1444 aa32.92■■■□□ 2.86
HMGA2-206ENST00000536545 ANKRD30AQ9BXX3 1397 aa32.91■■■□□ 2.86
HMGA2-206ENST00000536545 TRIM52Q96A61 297 aa32.88■■■□□ 2.85
HMGA2-206ENST00000536545 ARHGAP5Q13017 1502 aa32.88■■■□□ 2.85
HMGA2-206ENST00000536545 CCDC141Q6ZP82 1450 aa32.86■■■□□ 2.85
HMGA2-206ENST00000536545 OSCARQ8IYS5 282 aa32.83■■■□□ 2.85
HMGA2-206ENST00000536545 MPHOSPH9Q99550 1183 aa32.83■■■□□ 2.85
HMGA2-206ENST00000536545 SYCP2Q9BX26 1530 aa32.83■■■□□ 2.85
HMGA2-206ENST00000536545 TONSLQ96HA7 1378 aa32.8■■■□□ 2.84
HMGA2-206ENST00000536545 PZPP20742 1482 aa32.79■■■□□ 2.84
HMGA2-206ENST00000536545 PLEKHH2Q8IVE3 1493 aa32.79■■■□□ 2.84
HMGA2-206ENST00000536545 MAST1Q9Y2H9 1570 aa32.78■■■□□ 2.84
HMGA2-206ENST00000536545 ANKRD50Q9ULJ7 1429 aa32.78■■■□□ 2.84
HMGA2-206ENST00000536545 HNRNPMP52272 730 aaKnown RBP eCLIP32.78■■■□□ 2.842e-8■■□□□ 11.6
HMGA2-206ENST00000536545 PLCH2O75038 1416 aa32.77■■■□□ 2.84
HMGA2-206ENST00000536545 KIAA1107Q9UPP5 1409 aa32.77■■■□□ 2.84
HMGA2-206ENST00000536545 PPP1R15AO75807 674 aaPredicted RBP32.75■■■□□ 2.83
HMGA2-206ENST00000536545 WDR7Q9Y4E6 1490 aa32.75■■■□□ 2.83
HMGA2-206ENST00000536545 TSPY4P0CV99 314 aa32.73■■■□□ 2.83
HMGA2-206ENST00000536545 TSPY10P0CW01 314 aa32.73■■■□□ 2.83
HMGA2-206ENST00000536545 RSPH4AQ5TD94 716 aa32.73■■■□□ 2.83
HMGA2-206ENST00000536545 KCNH8Q96L42 1107 aa32.73■■■□□ 2.83
HMGA2-206ENST00000536545 ARAP3Q8WWN8 1544 aa32.72■■■□□ 2.83
HMGA2-206ENST00000536545 KIF15Q9NS87 1388 aa32.71■■■□□ 2.83
HMGA2-206ENST00000536545 ANKRD30BQ9BXX2 1392 aa32.7■■■□□ 2.82
HMGA2-206ENST00000536545 KDM5DQ9BY66 1539 aa32.69■■■□□ 2.82
HMGA2-206ENST00000536545 ABCC1P33527 1531 aa32.68■■■□□ 2.82
HMGA2-206ENST00000536545 ARHGEF12Q9NZN5 1544 aa32.66■■■□□ 2.82
HMGA2-206ENST00000536545 PLXNC1O60486 1568 aa32.66■■■□□ 2.82
HMGA2-206ENST00000536545 SLC4A1APQ9BWU0 796 aaKnown RBP32.64■■■□□ 2.82
HMGA2-206ENST00000536545 ABCA9Q8IUA7 1624 aa32.63■■■□□ 2.81
HMGA2-206ENST00000536545 RPRD2Q5VT52 1461 aaKnown RBP32.62■■■□□ 2.81
HMGA2-206ENST00000536545 FOXD1Q16676 465 aa32.62■■■□□ 2.81
HMGA2-206ENST00000536545 ASXL2Q76L83 1435 aa32.58■■■□□ 2.81
HMGA2-206ENST00000536545 EFCAB2Q5VUJ9 269 aa32.58■■■□□ 2.81
HMGA2-206ENST00000536545 TEX14Q8IWB6 1497 aa32.54■■■□□ 2.8
HMGA2-206ENST00000536545 UNC13BO14795 1591 aa32.51■■■□□ 2.8
HMGA2-206ENST00000536545 NUP155O75694 1391 aa32.5■■■□□ 2.79
HMGA2-206ENST00000536545 TRAPPC8Q9Y2L5 1435 aa32.48■■■□□ 2.79
HMGA2-206ENST00000536545 DUOX2Q9NRD8 1548 aa32.47■■■□□ 2.79
HMGA2-206ENST00000536545 MIER1Q8N108 512 aa32.46■■■□□ 2.79
HMGA2-206ENST00000536545 FANCAO15360 1455 aa32.45■■■□□ 2.79
HMGA2-206ENST00000536545 PKD2Q13563 968 aa32.45■■■□□ 2.78
HMGA2-206ENST00000536545 FAM135AQ9P2D6 1515 aa32.42■■■□□ 2.78
HMGA2-206ENST00000536545 ZFYVE16Q7Z3T8 1539 aa32.42■■■□□ 2.78
HMGA2-206ENST00000536545 ERBINQ96RT1 1412 aa32.42■■■□□ 2.78
HMGA2-206ENST00000536545 L3MBTL2Q969R5 705 aa32.41■■■□□ 2.78
HMGA2-206ENST00000536545 MAGI2Q86UL8 1455 aa32.39■■■□□ 2.78
HMGA2-206ENST00000536545 RTEL1-TNFRSF6BF6WH68 1400 aa32.38■■■□□ 2.77
HMGA2-206ENST00000536545 IQGAP3Q86VI3 1631 aa32.36■■■□□ 2.77
HMGA2-206ENST00000536545 NPM1P06748 294 aaKnown RBP eCLIP32.36■■■□□ 2.77
HMGA2-206ENST00000536545 INO80Q9ULG1 1556 aaPredicted RBP32.35■■■□□ 2.77
HMGA2-206ENST00000536545 ADGRL1O94910 1474 aa32.32■■■□□ 2.76
HMGA2-206ENST00000536545 SPAG9O60271 1321 aaKnown RBP32.3■■■□□ 2.76
HMGA2-206ENST00000536545 ATP7AQ04656 1500 aa32.28■■■□□ 2.76
HMGA2-206ENST00000536545 CFAP74Q9C0B2 1584 aa32.27■■■□□ 2.76
HMGA2-206ENST00000536545 AFAP1Q8N556 730 aa32.25■■■□□ 2.75
HMGA2-206ENST00000536545 SCAPERQ9BY12 1400 aa32.25■■■□□ 2.75
HMGA2-206ENST00000536545 HIRIP3Q9BW71 556 aaPredicted RBP32.22■■■□□ 2.75
HMGA2-206ENST00000536545 NBPF8Q3BBV2 869 aa32.2■■■□□ 2.75
HMGA2-206ENST00000536545 CD109Q6YHK3 1445 aa32.19■■■□□ 2.74
HMGA2-206ENST00000536545 RIMBP3CA6NJZ7 1639 aa32.19■■■□□ 2.74
HMGA2-206ENST00000536545 RIMBP3BA6NNM3 1639 aa32.19■■■□□ 2.74
HMGA2-206ENST00000536545 DEPDC5O75140 1603 aa32.19■■■□□ 2.74
HMGA2-206ENST00000536545 RIMBP3Q9UFD9 1639 aa32.19■■■□□ 2.74
HMGA2-206ENST00000536545 PLA2R1Q13018 1463 aa32.14■■■□□ 2.74
HMGA2-206ENST00000536545 ZNF518AQ6AHZ1 1483 aa32.14■■■□□ 2.74
HMGA2-206ENST00000536545 EIF2AK4Q9P2K8 1649 aaKnown RBP32.13■■■□□ 2.73
HMGA2-206ENST00000536545 HSPA5P11021 654 aaKnown RBP32.12■■■□□ 2.73
HMGA2-206ENST00000536545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.12■■■□□ 2.734e-9■□□□□ 8.3
HMGA2-206ENST00000536545 UHRF1BP1Q6BDS2 1440 aa32.12■■■□□ 2.73
HMGA2-206ENST00000536545 KIDINS220Q9ULH0 1771 aa32.11■■■□□ 2.73
HMGA2-206ENST00000536545 KDM5CP41229 1560 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms