RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 HFM1A2PYH4 1435 aa30.7■■■□□ 2.5
TRIM3-214ENST00000536344 TCOF1Q13428 1488 aaKnown RBP30.69■■■□□ 2.5
TRIM3-214ENST00000536344 MIA2Q96PC5 1412 aa30.69■■■□□ 2.5
TRIM3-214ENST00000536344 TRIM52Q96A61 297 aa30.66■■■□□ 2.5
TRIM3-214ENST00000536344 SHROOM2Q13796 1616 aa30.64■■■□□ 2.49
TRIM3-214ENST00000536344 GPATCH8Q9UKJ3 1502 aaKnown RBP30.63■■■□□ 2.49
TRIM3-214ENST00000536344 UACAQ9BZF9 1416 aa30.62■■■□□ 2.49
TRIM3-214ENST00000536344 KCNH8Q96L42 1107 aa30.62■■■□□ 2.49
TRIM3-214ENST00000536344 KDM6BO15054 1643 aa30.6■■■□□ 2.49
TRIM3-214ENST00000536344 DAPK1P53355 1430 aa30.58■■■□□ 2.49
TRIM3-214ENST00000536344 ABCC5O15440 1437 aa30.58■■■□□ 2.49
TRIM3-214ENST00000536344 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
TRIM3-214ENST00000536344 CAMSAP2Q08AD1 1489 aa30.55■■■□□ 2.48
TRIM3-214ENST00000536344 BCANQ96GW7 911 aa30.54■■■□□ 2.48
TRIM3-214ENST00000536344 FOXD1Q16676 465 aa30.53■■■□□ 2.48
TRIM3-214ENST00000536344 HNRNPMP52272 730 aaKnown RBP eCLIP30.49■■■□□ 2.47
TRIM3-214ENST00000536344 ADCY10Q96PN6 1610 aa30.48■■■□□ 2.47
TRIM3-214ENST00000536344 ABCC10Q5T3U5 1492 aa30.46■■■□□ 2.47
TRIM3-214ENST00000536344 CDC42BPAQ5VT25 1732 aa30.46■■■□□ 2.47
TRIM3-214ENST00000536344 DNMT1P26358 1616 aaKnown RBP30.46■■■□□ 2.47
TRIM3-214ENST00000536344 ITSN2Q9NZM3 1697 aa30.44■■■□□ 2.46
TRIM3-214ENST00000536344 ABCC2Q92887 1545 aa30.42■■■□□ 2.46
TRIM3-214ENST00000536344 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.46
TRIM3-214ENST00000536344 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
TRIM3-214ENST00000536344 AKNAQ7Z591 1439 aa30.36■■■□□ 2.45
TRIM3-214ENST00000536344 OSCARQ8IYS5 282 aa30.36■■■□□ 2.45
TRIM3-214ENST00000536344 HIRIP3Q9BW71 556 aaPredicted RBP30.36■■■□□ 2.45
TRIM3-214ENST00000536344 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
TRIM3-214ENST00000536344 TTC37Q6PGP7 1564 aa30.32■■■□□ 2.44
TRIM3-214ENST00000536344 ROCK1Q13464 1354 aa30.31■■■□□ 2.44
TRIM3-214ENST00000536344 NCOA1Q15788 1441 aa30.31■■■□□ 2.44
TRIM3-214ENST00000536344 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
TRIM3-214ENST00000536344 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
TRIM3-214ENST00000536344 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
TRIM3-214ENST00000536344 SLC4A1APQ9BWU0 796 aaKnown RBP30.28■■■□□ 2.44
TRIM3-214ENST00000536344 ZCCHC11Q5TAX3 1644 aaKnown RBP30.28■■■□□ 2.44
TRIM3-214ENST00000536344 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
TRIM3-214ENST00000536344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.27■■■□□ 2.44
TRIM3-214ENST00000536344 ARHGAP5Q13017 1502 aa30.25■■■□□ 2.43
TRIM3-214ENST00000536344 PPP1R15AO75807 674 aaPredicted RBP30.24■■■□□ 2.43
TRIM3-214ENST00000536344 C9orf84Q5VXU9 1444 aa30.23■■■□□ 2.43
TRIM3-214ENST00000536344 FKBP8Q14318 412 aa30.23■■■□□ 2.43
TRIM3-214ENST00000536344 ANKRD30AQ9BXX3 1397 aa30.22■■■□□ 2.43
TRIM3-214ENST00000536344 SAMD9LQ8IVG5 1584 aa30.21■■■□□ 2.43
TRIM3-214ENST00000536344 RBM19Q9Y4C8 960 aaKnown RBP30.2■■■□□ 2.43
TRIM3-214ENST00000536344 CROCC2H7BZ55 1655 aa30.18■■■□□ 2.42
TRIM3-214ENST00000536344 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
TRIM3-214ENST00000536344 PREX2Q70Z35 1606 aa30.17■■■□□ 2.42
TRIM3-214ENST00000536344 MBD5Q9P267 1494 aa30.16■■■□□ 2.42
TRIM3-214ENST00000536344 SYCP2Q9BX26 1530 aa30.16■■■□□ 2.42
TRIM3-214ENST00000536344 ANKRD50Q9ULJ7 1429 aa30.15■■■□□ 2.42
TRIM3-214ENST00000536344 ADGBQ8N7X0 1667 aa30.15■■■□□ 2.42
TRIM3-214ENST00000536344 UHRF1BP1LA0JNW5 1464 aa30.14■■■□□ 2.41
TRIM3-214ENST00000536344 KIF15Q9NS87 1388 aa30.11■■■□□ 2.41
TRIM3-214ENST00000536344 ADGRL2O95490 1459 aa30.1■■■□□ 2.41
TRIM3-214ENST00000536344 TIMELESSQ9UNS1 1208 aa30.09■■■□□ 2.41
TRIM3-214ENST00000536344 PKD2Q13563 968 aa30.09■■■□□ 2.41
TRIM3-214ENST00000536344 MYO5CQ9NQX4 1742 aa30.08■■■□□ 2.41
TRIM3-214ENST00000536344 CCDC141Q6ZP82 1450 aa30.07■■■□□ 2.4
TRIM3-214ENST00000536344 NUP155O75694 1391 aa30.06■■■□□ 2.4
TRIM3-214ENST00000536344 PZPP20742 1482 aa30.06■■■□□ 2.4
TRIM3-214ENST00000536344 L3MBTL2Q969R5 705 aa30.06■■■□□ 2.4
TRIM3-214ENST00000536344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.05■■■□□ 2.4
TRIM3-214ENST00000536344 MSH5O43196 834 aa30.04■■■□□ 2.4
TRIM3-214ENST00000536344 ARHGEF12Q9NZN5 1544 aa30.04■■■□□ 2.4
TRIM3-214ENST00000536344 EFCAB2Q5VUJ9 269 aa30.04■■■□□ 2.4
TRIM3-214ENST00000536344 ANKRD30BQ9BXX2 1392 aa30.03■■■□□ 2.4
TRIM3-214ENST00000536344 PLCH2O75038 1416 aa30.01■■■□□ 2.4
TRIM3-214ENST00000536344 AFAP1Q8N556 730 aa30.01■■■□□ 2.39
TRIM3-214ENST00000536344 SHANK2Q9UPX8 1470 aa30■■■□□ 2.39
TRIM3-214ENST00000536344 ARHGEF5Q12774 1597 aa29.99■■■□□ 2.39
TRIM3-214ENST00000536344 NPM1P06748 294 aaKnown RBP eCLIP29.98■■■□□ 2.39
TRIM3-214ENST00000536344 WDR7Q9Y4E6 1490 aa29.98■■■□□ 2.39
TRIM3-214ENST00000536344 ASXL2Q76L83 1435 aa29.97■■■□□ 2.39
TRIM3-214ENST00000536344 DDX10Q13206 875 aaKnown RBP29.97■■■□□ 2.39
TRIM3-214ENST00000536344 TRAPPC8Q9Y2L5 1435 aa29.95■■■□□ 2.38
TRIM3-214ENST00000536344 MYT1LQ9UL68 1186 aa29.95■■■□□ 2.38
TRIM3-214ENST00000536344 RSPH4AQ5TD94 716 aa29.93■■■□□ 2.38
TRIM3-214ENST00000536344 ZNF326Q5BKZ1 582 aaKnown RBP29.92■■■□□ 2.38
TRIM3-214ENST00000536344 CYB5RLQ6IPT4 315 aa29.91■■■□□ 2.38
TRIM3-214ENST00000536344 NBPF8Q3BBV2 869 aa29.87■■■□□ 2.37
TRIM3-214ENST00000536344 KIAA1107Q9UPP5 1409 aa29.87■■■□□ 2.37
TRIM3-214ENST00000536344 RPRD2Q5VT52 1461 aaKnown RBP29.86■■■□□ 2.37
TRIM3-214ENST00000536344 PLEKHH2Q8IVE3 1493 aa29.86■■■□□ 2.37
TRIM3-214ENST00000536344 PRKCSHP14314 528 aaPredicted RBP29.85■■■□□ 2.37
TRIM3-214ENST00000536344 FANCAO15360 1455 aa29.82■■■□□ 2.36
TRIM3-214ENST00000536344 SPAG9O60271 1321 aaKnown RBP29.82■■■□□ 2.36
TRIM3-214ENST00000536344 ABCC1P33527 1531 aa29.82■■■□□ 2.36
TRIM3-214ENST00000536344 HSPA5P11021 654 aaKnown RBP29.77■■■□□ 2.36
TRIM3-214ENST00000536344 KDM2AQ9Y2K7 1162 aa29.77■■■□□ 2.36
TRIM3-214ENST00000536344 NEFLP07196 543 aa29.76■■■□□ 2.36
TRIM3-214ENST00000536344 TEX14Q8IWB6 1497 aa29.76■■■□□ 2.35
TRIM3-214ENST00000536344 SCAPERQ9BY12 1400 aa29.74■■■□□ 2.35
TRIM3-214ENST00000536344 FAM135AQ9P2D6 1515 aa29.73■■■□□ 2.35
TRIM3-214ENST00000536344 ABCA9Q8IUA7 1624 aa29.71■■■□□ 2.35
TRIM3-214ENST00000536344 ADGRL1O94910 1474 aa29.71■■■□□ 2.35
TRIM3-214ENST00000536344 MAST1Q9Y2H9 1570 aa29.71■■■□□ 2.35
TRIM3-214ENST00000536344 RGL3Q3MIN7 710 aa29.7■■■□□ 2.35
TRIM3-214ENST00000536344 EIF4G2P78344 907 aaKnown RBP eCLIP29.66■■■□□ 2.34
TRIM3-214ENST00000536344 PLXNC1O60486 1568 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms