RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CHGAP10645 457 aaKnown RBP14.68□□□□□ -0.06
VBP1-203ENST00000535916 ZNF710Q8N1W2 664 aa14.68□□□□□ -0.06
VBP1-203ENST00000535916 PPP1R37O75864 691 aa14.65□□□□□ -0.06
VBP1-203ENST00000535916 FAM205CA6NFA0 338 aa14.62□□□□□ -0.07
VBP1-203ENST00000535916 HOXB1P14653 301 aaPredicted RBP14.62□□□□□ -0.07
VBP1-203ENST00000535916 POTEB3A0JP26 581 aa14.61□□□□□ -0.07
VBP1-203ENST00000535916 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
VBP1-203ENST00000535916 POTEBQ6S5H4 581 aa14.61□□□□□ -0.07
VBP1-203ENST00000535916 HS3ST6Q96QI5 342 aa14.6□□□□□ -0.07
VBP1-203ENST00000535916 C2orf72A6NCS6 295 aa14.58□□□□□ -0.08
VBP1-203ENST00000535916 KIF3CO14782 793 aa14.58□□□□□ -0.08
VBP1-203ENST00000535916 KRTAP3-3Q9BYR6 98 aa14.57□□□□□ -0.08
VBP1-203ENST00000535916 KRTAP3-2Q9BYR7 98 aa14.57□□□□□ -0.08
VBP1-203ENST00000535916 NKX1-1Q15270 411 aaPredicted RBP14.56□□□□□ -0.08
VBP1-203ENST00000535916 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
VBP1-203ENST00000535916 ZSWIM6Q9HCJ5 1215 aa14.54□□□□□ -0.08
VBP1-203ENST00000535916 GPR153Q6NV75 609 aa14.52□□□□□ -0.09
VBP1-203ENST00000535916 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
VBP1-203ENST00000535916 ERBB3P21860 1342 aa14.49□□□□□ -0.09
VBP1-203ENST00000535916 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
VBP1-203ENST00000535916 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
VBP1-203ENST00000535916 KHSRPQ92945 711 aaKnown RBP eCLIP14.45□□□□□ -0.12e-6■□□□□ 9.9
VBP1-203ENST00000535916 VARS2Q5ST30 1063 aaKnown RBP14.44□□□□□ -0.1
VBP1-203ENST00000535916 RYDENQ9NUL5 291 aaKnown RBP14.39□□□□□ -0.11
VBP1-203ENST00000535916 SLC34A2O95436 690 aa14.36□□□□□ -0.11
VBP1-203ENST00000535916 PCDHGA4Q9Y5G9 962 aa14.35□□□□□ -0.11
VBP1-203ENST00000535916 GTPBP6O43824 516 aaPredicted RBP14.34□□□□□ -0.11
VBP1-203ENST00000535916 NUDT7P0C024 238 aa14.34□□□□□ -0.11
VBP1-203ENST00000535916 RNF166Q96A37 237 aaPredicted RBP14.34□□□□□ -0.11
VBP1-203ENST00000535916 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
VBP1-203ENST00000535916 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.12
VBP1-203ENST00000535916 FOXK1P85037 733 aa14.33□□□□□ -0.12
VBP1-203ENST00000535916 PLPP6Q8IY26 295 aa14.32□□□□□ -0.12
VBP1-203ENST00000535916 DSG2Q14126 1118 aa14.31□□□□□ -0.12
VBP1-203ENST00000535916 ZNF687Q8N1G0 1237 aa14.3□□□□□ -0.12
VBP1-203ENST00000535916 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
VBP1-203ENST00000535916 LHX6Q9UPM6 363 aa14.25□□□□□ -0.13
VBP1-203ENST00000535916 PTCD2Q8WV60 388 aaKnown RBP14.23□□□□□ -0.13
VBP1-203ENST00000535916 NCKAP5LQ9HCH0 1330 aa14.21□□□□□ -0.13
VBP1-203ENST00000535916 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
VBP1-203ENST00000535916 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
VBP1-203ENST00000535916 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
VBP1-203ENST00000535916 PPP1R15BQ5SWA1 713 aa14.17□□□□□ -0.14
VBP1-203ENST00000535916 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
VBP1-203ENST00000535916 PDE4AP27815 886 aa14.15□□□□□ -0.14
VBP1-203ENST00000535916 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
VBP1-203ENST00000535916 TBC1D12O60347 775 aa14.12□□□□□ -0.15
VBP1-203ENST00000535916 OXER1Q8TDS5 423 aa14.12□□□□□ -0.15
VBP1-203ENST00000535916 POTEEQ6S8J3 1075 aa14.11□□□□□ -0.15
VBP1-203ENST00000535916 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
VBP1-203ENST00000535916 AXIN2Q9Y2T1 843 aa14.1□□□□□ -0.15
VBP1-203ENST00000535916 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.15
VBP1-203ENST00000535916 ANKRD13DQ6ZTN6 518 aa14.09□□□□□ -0.15
VBP1-203ENST00000535916 CADPS2Q86UW7 1296 aa14.09□□□□□ -0.15
VBP1-203ENST00000535916 PBX2P40425 430 aa14.08□□□□□ -0.16
VBP1-203ENST00000535916 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
VBP1-203ENST00000535916 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
VBP1-203ENST00000535916 DDX27Q96GQ7 796 aaKnown RBP14.07□□□□□ -0.16
VBP1-203ENST00000535916 MFSD10Q14728 455 aa14.05□□□□□ -0.16
VBP1-203ENST00000535916 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
VBP1-203ENST00000535916 ARHGAP33O14559 1287 aa13.99□□□□□ -0.17
VBP1-203ENST00000535916 PTGER2P43116 358 aa13.99□□□□□ -0.17
VBP1-203ENST00000535916 PSEN2P49810 448 aa13.96□□□□□ -0.17
VBP1-203ENST00000535916 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.17
VBP1-203ENST00000535916 DMRTA1Q5VZB9 504 aa13.94□□□□□ -0.18
VBP1-203ENST00000535916 ZNF454Q8N9F8 522 aa13.94□□□□□ -0.18
VBP1-203ENST00000535916 EVI5O60447 810 aa13.93□□□□□ -0.18
VBP1-203ENST00000535916 SPRYD3Q8NCJ5 442 aa13.93□□□□□ -0.18
VBP1-203ENST00000535916 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
VBP1-203ENST00000535916 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
VBP1-203ENST00000535916 ADGRD1Q6QNK2 874 aa13.91□□□□□ -0.18
VBP1-203ENST00000535916 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
VBP1-203ENST00000535916 FOSBP53539 338 aa13.9□□□□□ -0.18
VBP1-203ENST00000535916 KCNK17Q96T54 332 aa13.89□□□□□ -0.19
VBP1-203ENST00000535916 JPH4Q96JJ6 628 aa13.86□□□□□ -0.19
VBP1-203ENST00000535916 TK2O00142 265 aa13.85□□□□□ -0.19
VBP1-203ENST00000535916 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
VBP1-203ENST00000535916 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
VBP1-203ENST00000535916 CAMK2BQ13554 666 aa13.84□□□□□ -0.19
VBP1-203ENST00000535916 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
VBP1-203ENST00000535916 KCNH8Q96L42 1107 aa13.83□□□□□ -0.2
VBP1-203ENST00000535916 HRO43593 1189 aa13.81□□□□□ -0.2
VBP1-203ENST00000535916 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
VBP1-203ENST00000535916 DPYSL4O14531 572 aa13.79□□□□□ -0.2
VBP1-203ENST00000535916 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
VBP1-203ENST00000535916 PLA2G2EQ9NZK7 142 aa13.79□□□□□ -0.2
VBP1-203ENST00000535916 PTPREP23469 700 aa13.77□□□□□ -0.21
VBP1-203ENST00000535916 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
VBP1-203ENST00000535916 PCDHGA10Q9Y5H3 936 aa13.76□□□□□ -0.21
VBP1-203ENST00000535916 ZBED2Q9BTP6 218 aa13.71□□□□□ -0.21
VBP1-203ENST00000535916 SLC4A5Q9BY07 1137 aa13.71□□□□□ -0.21
VBP1-203ENST00000535916 PHF14O94880 888 aa13.7□□□□□ -0.22
VBP1-203ENST00000535916 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
VBP1-203ENST00000535916 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
VBP1-203ENST00000535916 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
VBP1-203ENST00000535916 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
VBP1-203ENST00000535916 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
VBP1-203ENST00000535916 E2F4Q16254 413 aa13.64□□□□□ -0.23
VBP1-203ENST00000535916 DDX12PQ92771 950 aa13.64□□□□□ -0.23
VBP1-203ENST00000535916 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms