RNA–Protein interactions for RNA: ENST00000535306.6

RNF135-205, Transcript of ring finger protein 135, humanhuman

TSL 1 (best) BASIC

Gene RNF135, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-205ENST00000535306 ITSN2Q9NZM3 1697 aa28.37■■■□□ 2.13
RNF135-205ENST00000535306 DENND4BO75064 1496 aaPredicted RBP28.37■■■□□ 2.13
RNF135-205ENST00000535306 CHD1O14646 1710 aa28.35■■■□□ 2.13
RNF135-205ENST00000535306 TONSLQ96HA7 1378 aa28.35■■■□□ 2.13
RNF135-205ENST00000535306 ATP10BO94823 1461 aa28.35■■■□□ 2.13
RNF135-205ENST00000535306 CAMSAP2Q08AD1 1489 aa28.33■■■□□ 2.13
RNF135-205ENST00000535306 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
RNF135-205ENST00000535306 TRIM52Q96A61 297 aa28.3■■■□□ 2.12
RNF135-205ENST00000535306 YTHDC1Q96MU7 727 aaKnown RBP28.29■■■□□ 2.12
RNF135-205ENST00000535306 PTPRGP23470 1445 aa28.29■■■□□ 2.12
RNF135-205ENST00000535306 PLEKHD1A6NEE1 506 aa28.28■■■□□ 2.12
RNF135-205ENST00000535306 ABCC10Q5T3U5 1492 aa28.26■■■□□ 2.11
RNF135-205ENST00000535306 KDM5BQ9UGL1 1544 aa28.26■■■□□ 2.11
RNF135-205ENST00000535306 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
RNF135-205ENST00000535306 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
RNF135-205ENST00000535306 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
RNF135-205ENST00000535306 CROCC2H7BZ55 1655 aa28.19■■■□□ 2.1
RNF135-205ENST00000535306 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
RNF135-205ENST00000535306 ADGRL2O95490 1459 aa28.18■■■□□ 2.1
RNF135-205ENST00000535306 NCOA1Q15788 1441 aa28.18■■■□□ 2.1
RNF135-205ENST00000535306 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
RNF135-205ENST00000535306 GTF3C3Q9Y5Q9 886 aa28.11■■■□□ 2.09
RNF135-205ENST00000535306 ANKRD30BQ9BXX2 1392 aa28.1■■■□□ 2.09
RNF135-205ENST00000535306 FOXD1Q16676 465 aa28.09■■■□□ 2.09
RNF135-205ENST00000535306 HIRIP3Q9BW71 556 aaPredicted RBP28.07■■■□□ 2.08
RNF135-205ENST00000535306 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
RNF135-205ENST00000535306 ANKRD30AQ9BXX3 1397 aa28.07■■■□□ 2.08
RNF135-205ENST00000535306 SHANK2Q9UPX8 1470 aa28.07■■■□□ 2.08
RNF135-205ENST00000535306 DDX10Q13206 875 aaKnown RBP28.07■■■□□ 2.08
RNF135-205ENST00000535306 PZPP20742 1482 aa28.05■■■□□ 2.08
RNF135-205ENST00000535306 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
RNF135-205ENST00000535306 RPRD2Q5VT52 1461 aaKnown RBP28.03■■■□□ 2.08
RNF135-205ENST00000535306 CLASP1Q7Z460 1538 aa28.01■■■□□ 2.08
RNF135-205ENST00000535306 C9orf84Q5VXU9 1444 aa28.01■■■□□ 2.07
RNF135-205ENST00000535306 ABCC2Q92887 1545 aa28■■■□□ 2.07
RNF135-205ENST00000535306 ARHGEF5Q12774 1597 aa27.99■■■□□ 2.07
RNF135-205ENST00000535306 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
RNF135-205ENST00000535306 PREX2Q70Z35 1606 aa27.98■■■□□ 2.07
RNF135-205ENST00000535306 ANKRD50Q9ULJ7 1429 aa27.98■■■□□ 2.07
RNF135-205ENST00000535306 CDC42BPBQ9Y5S2 1711 aa27.97■■■□□ 2.07
RNF135-205ENST00000535306 MBD5Q9P267 1494 aa27.97■■■□□ 2.07
RNF135-205ENST00000535306 SAMD9LQ8IVG5 1584 aa27.95■■■□□ 2.06
RNF135-205ENST00000535306 TEX14Q8IWB6 1497 aa27.94■■■□□ 2.06
RNF135-205ENST00000535306 TSPY4P0CV99 314 aa27.92■■■□□ 2.06
RNF135-205ENST00000535306 TSPY10P0CW01 314 aa27.92■■■□□ 2.06
RNF135-205ENST00000535306 HNRNPMP52272 730 aaKnown RBP eCLIP27.92■■■□□ 2.06
RNF135-205ENST00000535306 KIAA1107Q9UPP5 1409 aa27.91■■■□□ 2.06
RNF135-205ENST00000535306 TTC37Q6PGP7 1564 aa27.9■■■□□ 2.06
RNF135-205ENST00000535306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.9■■■□□ 2.06
RNF135-205ENST00000535306 CCDC141Q6ZP82 1450 aa27.88■■■□□ 2.05
RNF135-205ENST00000535306 UHRF1BP1LA0JNW5 1464 aa27.85■■■□□ 2.05
RNF135-205ENST00000535306 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
RNF135-205ENST00000535306 HSPA5P11021 654 aaKnown RBP27.85■■■□□ 2.05
RNF135-205ENST00000535306 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
RNF135-205ENST00000535306 KCNH8Q96L42 1107 aa27.85■■■□□ 2.05
RNF135-205ENST00000535306 KDM5DQ9BY66 1539 aa27.84■■■□□ 2.05
RNF135-205ENST00000535306 PKD2Q13563 968 aa27.83■■■□□ 2.05
RNF135-205ENST00000535306 ARHGAP5Q13017 1502 aa27.82■■■□□ 2.04
RNF135-205ENST00000535306 NBPF8Q3BBV2 869 aa27.82■■■□□ 2.04
RNF135-205ENST00000535306 EIF4G2P78344 907 aaKnown RBP eCLIP27.81■■■□□ 2.04
RNF135-205ENST00000535306 NUP155O75694 1391 aa27.8■■■□□ 2.04
RNF135-205ENST00000535306 ZCCHC11Q5TAX3 1644 aaKnown RBP27.8■■■□□ 2.04
RNF135-205ENST00000535306 SYCP2Q9BX26 1530 aa27.79■■■□□ 2.04
RNF135-205ENST00000535306 MYO5CQ9NQX4 1742 aa27.79■■■□□ 2.04
RNF135-205ENST00000535306 MAST1Q9Y2H9 1570 aa27.77■■■□□ 2.04
RNF135-205ENST00000535306 ANP32CO43423 234 aa27.76■■■□□ 2.03
RNF135-205ENST00000535306 CCER2I3L3R5 266 aa27.75■■■□□ 2.03
RNF135-205ENST00000535306 WASHC2AQ641Q2 1341 aa27.75■■■□□ 2.03
RNF135-205ENST00000535306 PLEKHH2Q8IVE3 1493 aa27.74■■■□□ 2.03
RNF135-205ENST00000535306 PLCH2O75038 1416 aa27.7■■■□□ 2.03
RNF135-205ENST00000535306 SPATA31E1Q6ZUB1 1445 aa27.68■■■□□ 2.02
RNF135-205ENST00000535306 ARHGEF12Q9NZN5 1544 aa27.66■■■□□ 2.02
RNF135-205ENST00000535306 PLXNC1O60486 1568 aa27.66■■■□□ 2.02
RNF135-205ENST00000535306 FAM135AQ9P2D6 1515 aa27.64■■■□□ 2.02
RNF135-205ENST00000535306 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
RNF135-205ENST00000535306 UNC13BO14795 1591 aa27.61■■■□□ 2.01
RNF135-205ENST00000535306 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
RNF135-205ENST00000535306 CCDC7Q96M83 1385 aa27.61■■■□□ 2.01
RNF135-205ENST00000535306 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2.01
RNF135-205ENST00000535306 ABCC1P33527 1531 aa27.58■■■□□ 2.01
RNF135-205ENST00000535306 CNTLNQ9NXG0 1405 aa27.57■■■□□ 2
RNF135-205ENST00000535306 ARAP3Q8WWN8 1544 aa27.55■■■□□ 2
RNF135-205ENST00000535306 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
RNF135-205ENST00000535306 POLR1AO95602 1720 aaPredicted RBP27.54■■■□□ 2
RNF135-205ENST00000535306 WDR7Q9Y4E6 1490 aa27.51■■□□□ 1.99
RNF135-205ENST00000535306 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
RNF135-205ENST00000535306 ERBINQ96RT1 1412 aa27.51■■□□□ 1.99
RNF135-205ENST00000535306 IQGAP3Q86VI3 1631 aa27.5■■□□□ 1.99
RNF135-205ENST00000535306 RALGAPBQ86X10 1494 aa27.5■■□□□ 1.99
RNF135-205ENST00000535306 KIF7Q2M1P5 1343 aa27.49■■□□□ 1.99
RNF135-205ENST00000535306 ZNF326Q5BKZ1 582 aaKnown RBP27.49■■□□□ 1.99
RNF135-205ENST00000535306 MAGI2Q86UL8 1455 aa27.48■■□□□ 1.99
RNF135-205ENST00000535306 USP47Q96K76 1375 aa27.47■■□□□ 1.99
RNF135-205ENST00000535306 KDM5CP41229 1560 aa27.47■■□□□ 1.99
RNF135-205ENST00000535306 PLA2R1Q13018 1463 aa27.45■■□□□ 1.99
RNF135-205ENST00000535306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.44■■□□□ 1.98
RNF135-205ENST00000535306 CCDC144AA2RUR9 1427 aa27.43■■□□□ 1.98
RNF135-205ENST00000535306 ABCA9Q8IUA7 1624 aa27.42■■□□□ 1.98
RNF135-205ENST00000535306 RTEL1-TNFRSF6BF6WH68 1400 aa27.42■■□□□ 1.98
RNF135-205ENST00000535306 BCORL1Q5H9F3 1711 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms