RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
TNFRSF1A-206ENST00000535038 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
TNFRSF1A-206ENST00000535038 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1A-206ENST00000535038 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
TNFRSF1A-206ENST00000535038 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
TNFRSF1A-206ENST00000535038 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
TNFRSF1A-206ENST00000535038 ERBB3P21860 1342 aa12.2□□□□□ -0.46
TNFRSF1A-206ENST00000535038 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
TNFRSF1A-206ENST00000535038 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
TNFRSF1A-206ENST00000535038 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
TNFRSF1A-206ENST00000535038 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
TNFRSF1A-206ENST00000535038 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
TNFRSF1A-206ENST00000535038 C2orf72A6NCS6 295 aa12.15□□□□□ -0.46
TNFRSF1A-206ENST00000535038 KIF3CO14782 793 aa12.15□□□□□ -0.46
TNFRSF1A-206ENST00000535038 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
TNFRSF1A-206ENST00000535038 PPP1R37O75864 691 aa12.13□□□□□ -0.47
TNFRSF1A-206ENST00000535038 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-206ENST00000535038 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-206ENST00000535038 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
TNFRSF1A-206ENST00000535038 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
TNFRSF1A-206ENST00000535038 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFRSF1A-206ENST00000535038 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
TNFRSF1A-206ENST00000535038 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-206ENST00000535038 SLC34A2O95436 690 aa12.01□□□□□ -0.49
TNFRSF1A-206ENST00000535038 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
TNFRSF1A-206ENST00000535038 NUDT7P0C024 238 aa11.99□□□□□ -0.49
TNFRSF1A-206ENST00000535038 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF1A-206ENST00000535038 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
TNFRSF1A-206ENST00000535038 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
TNFRSF1A-206ENST00000535038 FOXK1P85037 733 aa11.94□□□□□ -0.5
TNFRSF1A-206ENST00000535038 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-206ENST00000535038 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
TNFRSF1A-206ENST00000535038 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
TNFRSF1A-206ENST00000535038 DCAF8L2P0C7V8 631 aa11.9□□□□□ -0.5
TNFRSF1A-206ENST00000535038 DSG2Q14126 1118 aa11.89□□□□□ -0.51
TNFRSF1A-206ENST00000535038 PTCD2Q8WV60 388 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-206ENST00000535038 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
TNFRSF1A-206ENST00000535038 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-206ENST00000535038 PBX2P40425 430 aa11.85□□□□□ -0.51
TNFRSF1A-206ENST00000535038 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
TNFRSF1A-206ENST00000535038 PTGER2P43116 358 aa11.84□□□□□ -0.51
TNFRSF1A-206ENST00000535038 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
TNFRSF1A-206ENST00000535038 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-206ENST00000535038 TBC1D12O60347 775 aa11.83□□□□□ -0.52
TNFRSF1A-206ENST00000535038 GTPBP6O43824 516 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-206ENST00000535038 CRISPLD2Q9H0B8 497 aa11.82□□□□□ -0.52
TNFRSF1A-206ENST00000535038 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
TNFRSF1A-206ENST00000535038 AXIN2Q9Y2T1 843 aa11.8□□□□□ -0.52
TNFRSF1A-206ENST00000535038 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
TNFRSF1A-206ENST00000535038 PPP1R15BQ5SWA1 713 aa11.78□□□□□ -0.52
TNFRSF1A-206ENST00000535038 PDE4AP27815 886 aa11.77□□□□□ -0.53
TNFRSF1A-206ENST00000535038 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
TNFRSF1A-206ENST00000535038 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
TNFRSF1A-206ENST00000535038 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
TNFRSF1A-206ENST00000535038 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
TNFRSF1A-206ENST00000535038 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
TNFRSF1A-206ENST00000535038 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-206ENST00000535038 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-206ENST00000535038 ADGRD1Q6QNK2 874 aa11.68□□□□□ -0.54
TNFRSF1A-206ENST00000535038 PSEN2P49810 448 aa11.67□□□□□ -0.54
TNFRSF1A-206ENST00000535038 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
TNFRSF1A-206ENST00000535038 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
TNFRSF1A-206ENST00000535038 TK2O00142 265 aa11.64□□□□□ -0.55
TNFRSF1A-206ENST00000535038 MFSD10Q14728 455 aa11.64□□□□□ -0.55
TNFRSF1A-206ENST00000535038 ZNF454Q8N9F8 522 aa11.64□□□□□ -0.55
TNFRSF1A-206ENST00000535038 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
TNFRSF1A-206ENST00000535038 EVI5O60447 810 aa11.6□□□□□ -0.55
TNFRSF1A-206ENST00000535038 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
TNFRSF1A-206ENST00000535038 MAP3K9P80192 1104 aa11.59□□□□□ -0.55
TNFRSF1A-206ENST00000535038 ANO8Q9HCE9 1232 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-206ENST00000535038 HRO43593 1189 aa11.58□□□□□ -0.56
TNFRSF1A-206ENST00000535038 FOSBP53539 338 aa11.58□□□□□ -0.56
TNFRSF1A-206ENST00000535038 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
TNFRSF1A-206ENST00000535038 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-206ENST00000535038 JPH4Q96JJ6 628 aa11.57□□□□□ -0.56
TNFRSF1A-206ENST00000535038 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
TNFRSF1A-206ENST00000535038 AMER1Q5JTC6 1135 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-206ENST00000535038 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
TNFRSF1A-206ENST00000535038 PTPREP23469 700 aa11.53□□□□□ -0.56
TNFRSF1A-206ENST00000535038 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
TNFRSF1A-206ENST00000535038 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
TNFRSF1A-206ENST00000535038 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.57
TNFRSF1A-206ENST00000535038 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
TNFRSF1A-206ENST00000535038 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
TNFRSF1A-206ENST00000535038 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-206ENST00000535038 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
TNFRSF1A-206ENST00000535038 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
TNFRSF1A-206ENST00000535038 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
TNFRSF1A-206ENST00000535038 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-206ENST00000535038 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-206ENST00000535038 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
TNFRSF1A-206ENST00000535038 DPYSL4O14531 572 aa11.42□□□□□ -0.58
TNFRSF1A-206ENST00000535038 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
TNFRSF1A-206ENST00000535038 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-206ENST00000535038 PHF14O94880 888 aa11.41□□□□□ -0.58
TNFRSF1A-206ENST00000535038 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
TNFRSF1A-206ENST00000535038 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
TNFRSF1A-206ENST00000535038 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
TNFRSF1A-206ENST00000535038 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
TNFRSF1A-206ENST00000535038 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms