RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TREML4Q6UXN2 200 aa4.86□□□□□ -1.63
COPB1-212ENST00000534771 HRO43593 1189 aa4.85□□□□□ -1.63
COPB1-212ENST00000534771 MIER1Q8N108 512 aa4.85□□□□□ -1.63
COPB1-212ENST00000534771 NRG2O14511 850 aaPredicted RBP4.82□□□□□ -1.64
COPB1-212ENST00000534771 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
COPB1-212ENST00000534771 ARHGAP33O14559 1287 aa4.8□□□□□ -1.64
COPB1-212ENST00000534771 PYGBP11216 843 aa4.8□□□□□ -1.64
COPB1-212ENST00000534771 ILDR1Q86SU0 546 aaPredicted RBP4.8□□□□□ -1.64
COPB1-212ENST00000534771 TK2O00142 265 aa4.79□□□□□ -1.64
COPB1-212ENST00000534771 NUBP1P53384 320 aa4.79□□□□□ -1.64
COPB1-212ENST00000534771 FAM212AQ96EL1 285 aa4.78□□□□□ -1.64
COPB1-212ENST00000534771 POTECB2RU33 542 aa4.77□□□□□ -1.65
COPB1-212ENST00000534771 DMRTA1Q5VZB9 504 aa4.77□□□□□ -1.65
COPB1-212ENST00000534771 TMEM92Q6UXU6 159 aa4.77□□□□□ -1.65
COPB1-212ENST00000534771 LHX6Q9UPM6 363 aa4.76□□□□□ -1.65
COPB1-212ENST00000534771 NUDT7P0C024 238 aa4.74□□□□□ -1.65
COPB1-212ENST00000534771 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
COPB1-212ENST00000534771 PSEN2P49810 448 aa4.73□□□□□ -1.65
COPB1-212ENST00000534771 THSD4Q6ZMP0 1018 aa4.73□□□□□ -1.65
COPB1-212ENST00000534771 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
COPB1-212ENST00000534771 INSM1Q01101 510 aaPredicted RBP4.72□□□□□ -1.65
COPB1-212ENST00000534771 EHMT2Q96KQ7 1210 aa4.72□□□□□ -1.65
COPB1-212ENST00000534771 WFS1O76024 890 aa4.69□□□□□ -1.66
COPB1-212ENST00000534771 KRTAP9-6A0A140TA67 174 aa4.68□□□□□ -1.66
COPB1-212ENST00000534771 ITGBL1O95965 494 aaPredicted RBP4.68□□□□□ -1.66
COPB1-212ENST00000534771 KRTAP1-3Q8IUG1 177 aa4.68□□□□□ -1.66
COPB1-212ENST00000534771 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
COPB1-212ENST00000534771 PSEN1P49768 467 aa4.67□□□□□ -1.66
COPB1-212ENST00000534771 GOLGA8CPA6NN73 597 aa4.66□□□□□ -1.66
COPB1-212ENST00000534771 XP32Q5T750 250 aa4.66□□□□□ -1.66
COPB1-212ENST00000534771 PLCD3Q8N3E9 789 aa4.66□□□□□ -1.66
COPB1-212ENST00000534771 PRKD2Q9BZL6 878 aa4.66□□□□□ -1.66
COPB1-212ENST00000534771 PDZRN3Q9UPQ7 1066 aa4.66□□□□□ -1.66
COPB1-212ENST00000534771 WNT2BQ93097 391 aa4.65□□□□□ -1.67
COPB1-212ENST00000534771 CABP2Q9NPB3 220 aa4.64□□□□□ -1.67
COPB1-212ENST00000534771 WIPF1O43516 503 aa4.63□□□□□ -1.67
COPB1-212ENST00000534771 ZNF467Q7Z7K2 595 aaPredicted RBP4.63□□□□□ -1.67
COPB1-212ENST00000534771 MICALL2Q8IY33 904 aa4.63□□□□□ -1.67
COPB1-212ENST00000534771 KCNC4Q03721 635 aa4.62□□□□□ -1.67
COPB1-212ENST00000534771 ZBTB47Q9UFB7 747 aaPredicted RBP4.62□□□□□ -1.67
COPB1-212ENST00000534771 PSMG3-AS1Q96PY0 264 aa4.6□□□□□ -1.67
COPB1-212ENST00000534771 VPS9D1Q9Y2B5 631 aa4.6□□□□□ -1.67
COPB1-212ENST00000534771 FAM181BA6NEQ2 426 aa4.59□□□□□ -1.67
COPB1-212ENST00000534771 MYT1Q01538 1121 aa4.59□□□□□ -1.67
COPB1-212ENST00000534771 ANO8Q9HCE9 1232 aaPredicted RBP4.58□□□□□ -1.68
COPB1-212ENST00000534771 PCDHGA4Q9Y5G9 962 aa4.58□□□□□ -1.68
COPB1-212ENST00000534771 PSDA5PKW4 1024 aaPredicted RBP4.57□□□□□ -1.68
COPB1-212ENST00000534771 NFX1Q12986 1120 aaKnown RBP4.55□□□□□ -1.68
COPB1-212ENST00000534771 KCTD17Q8N5Z5 321 aa4.55□□□□□ -1.68
COPB1-212ENST00000534771 KCNK17Q96T54 332 aa4.55□□□□□ -1.68
COPB1-212ENST00000534771 PKDCCQ504Y2 493 aa4.54□□□□□ -1.68
COPB1-212ENST00000534771 MRPL50Q8N5N7 158 aaKnown RBP4.54□□□□□ -1.68
COPB1-212ENST00000534771 V9GY48 417 aaPredicted RBP4.54□□□□□ -1.68
COPB1-212ENST00000534771 BHMG1C9JSJ3 638 aaPredicted RBP4.53□□□□□ -1.68
COPB1-212ENST00000534771 PROM2Q8N271 834 aa4.52□□□□□ -1.69
COPB1-212ENST00000534771 KCNH8Q96L42 1107 aa4.52□□□□□ -1.69
COPB1-212ENST00000534771 PDAP1Q13442 181 aaKnown RBP4.51□□□□□ -1.69
COPB1-212ENST00000534771 DGAT1O75907 488 aa4.49□□□□□ -1.69
COPB1-212ENST00000534771 PPP4R3BQ5MIZ7 849 aa4.49□□□□□ -1.69
COPB1-212ENST00000534771 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
COPB1-212ENST00000534771 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
COPB1-212ENST00000534771 EFCAB3Q8N7B9 438 aa4.46□□□□□ -1.7
COPB1-212ENST00000534771 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
COPB1-212ENST00000534771 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
COPB1-212ENST00000534771 ST8SIA5O15466 376 aa4.45□□□□□ -1.7
COPB1-212ENST00000534771 SLC34A2O95436 690 aa4.45□□□□□ -1.7
COPB1-212ENST00000534771 BCAMP50895 628 aa4.45□□□□□ -1.7
COPB1-212ENST00000534771 SLC4A5Q9BY07 1137 aa4.45□□□□□ -1.7
COPB1-212ENST00000534771 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
COPB1-212ENST00000534771 PPP1R18Q6NYC8 613 aa4.44□□□□□ -1.7
COPB1-212ENST00000534771 ZSCAN1Q8NBB4 408 aa4.44□□□□□ -1.7
COPB1-212ENST00000534771 ANKK1Q8NFD2 765 aa4.44□□□□□ -1.7
COPB1-212ENST00000534771 C11orf95C9JLR9 678 aaPredicted RBP4.43□□□□□ -1.7
COPB1-212ENST00000534771 WBP1LQ9NX94 342 aa4.43□□□□□ -1.7
COPB1-212ENST00000534771 KDM4FA0A1W2PPD8 638 aa4.42□□□□□ -1.7
COPB1-212ENST00000534771 BTBD11A6QL63 1104 aa4.42□□□□□ -1.7
COPB1-212ENST00000534771 CHRM1P11229 460 aaPredicted RBP4.42□□□□□ -1.7
COPB1-212ENST00000534771 TRIM67Q6ZTA4 783 aa4.42□□□□□ -1.7
COPB1-212ENST00000534771 NYAP1Q6ZVC0 841 aa4.42□□□□□ -1.7
COPB1-212ENST00000534771 AAASQ9NRG9 546 aa4.42□□□□□ -1.7
COPB1-212ENST00000534771 C2orf72A6NCS6 295 aa4.41□□□□□ -1.7
COPB1-212ENST00000534771 FAM187AA6NFU0 413 aa4.4□□□□□ -1.71
COPB1-212ENST00000534771 LORP23490 312 aaPredicted RBP4.4□□□□□ -1.71
COPB1-212ENST00000534771 NBPF3Q9H094 633 aa4.4□□□□□ -1.71
COPB1-212ENST00000534771 TERTO14746 1132 aaKnown RBP4.39□□□□□ -1.71
COPB1-212ENST00000534771 DACH1Q9UI36 760 aa4.39□□□□□ -1.71
COPB1-212ENST00000534771 ZBED2Q9BTP6 218 aa4.38□□□□□ -1.71
COPB1-212ENST00000534771 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.38□□□□□ -1.71
COPB1-212ENST00000534771 GMPR2Q9P2T1 348 aaKnown RBP4.38□□□□□ -1.71
COPB1-212ENST00000534771 SOWAHBA6NEL2 793 aa4.37□□□□□ -1.71
COPB1-212ENST00000534771 KIF3CO14782 793 aa4.37□□□□□ -1.71
COPB1-212ENST00000534771 GSE1Q14687 1217 aa4.37□□□□□ -1.71
COPB1-212ENST00000534771 MS4A4AQ96JQ5 239 aa4.37□□□□□ -1.71
COPB1-212ENST00000534771 TMEM151AQ8N4L1 468 aa4.36□□□□□ -1.71
COPB1-212ENST00000534771 KCNMA1Q12791 1236 aa4.35□□□□□ -1.71
COPB1-212ENST00000534771 GSK3AP49840 483 aa4.34□□□□□ -1.71
COPB1-212ENST00000534771 GDF11O95390 407 aa4.33□□□□□ -1.72
COPB1-212ENST00000534771 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
COPB1-212ENST00000534771 GMPRP36959 345 aa4.32□□□□□ -1.72
COPB1-212ENST00000534771 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms