RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
SF3B2-216ENST00000534765 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
SF3B2-216ENST00000534765 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-216ENST00000534765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.32
SF3B2-216ENST00000534765 TTC37Q6PGP7 1564 aa13.02□□□□□ -0.33
SF3B2-216ENST00000534765 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.33
SF3B2-216ENST00000534765 ABCC5O15440 1437 aa13.01□□□□□ -0.33
SF3B2-216ENST00000534765 ABCC2Q92887 1545 aa13□□□□□ -0.33
SF3B2-216ENST00000534765 ANO8Q9HCE9 1232 aaPredicted RBP13□□□□□ -0.33
SF3B2-216ENST00000534765 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
SF3B2-216ENST00000534765 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
SF3B2-216ENST00000534765 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
SF3B2-216ENST00000534765 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
SF3B2-216ENST00000534765 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
SF3B2-216ENST00000534765 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
SF3B2-216ENST00000534765 DAPK1P53355 1430 aa12.98□□□□□ -0.33
SF3B2-216ENST00000534765 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
SF3B2-216ENST00000534765 FOXD1Q16676 465 aa12.96□□□□□ -0.33
SF3B2-216ENST00000534765 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-216ENST00000534765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.96□□□□□ -0.33
SF3B2-216ENST00000534765 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
SF3B2-216ENST00000534765 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
SF3B2-216ENST00000534765 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
SF3B2-216ENST00000534765 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
SF3B2-216ENST00000534765 MIER1Q8N108 512 aa12.94□□□□□ -0.34
SF3B2-216ENST00000534765 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
SF3B2-216ENST00000534765 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
SF3B2-216ENST00000534765 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
SF3B2-216ENST00000534765 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.345e-6■■■■□ 20.8
SF3B2-216ENST00000534765 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
SF3B2-216ENST00000534765 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-216ENST00000534765 PREX2Q70Z35 1606 aa12.9□□□□□ -0.34
SF3B2-216ENST00000534765 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
SF3B2-216ENST00000534765 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
SF3B2-216ENST00000534765 SUPT16HQ9Y5B9 1047 aaKnown RBP12.89□□□□□ -0.35
SF3B2-216ENST00000534765 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
SF3B2-216ENST00000534765 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
SF3B2-216ENST00000534765 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-216ENST00000534765 RTN4Q9NQC3 1192 aaKnown RBP12.87□□□□□ -0.35
SF3B2-216ENST00000534765 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-216ENST00000534765 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
SF3B2-216ENST00000534765 SYCP2Q9BX26 1530 aa12.86□□□□□ -0.35
SF3B2-216ENST00000534765 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-216ENST00000534765 ADGBQ8N7X0 1667 aa12.85□□□□□ -0.35
SF3B2-216ENST00000534765 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-216ENST00000534765 UHRF1BP1LA0JNW5 1464 aa12.84□□□□□ -0.35
SF3B2-216ENST00000534765 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
SF3B2-216ENST00000534765 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
SF3B2-216ENST00000534765 PZPP20742 1482 aa12.83□□□□□ -0.36
SF3B2-216ENST00000534765 NEFLP07196 543 aa12.82□□□□□ -0.36
SF3B2-216ENST00000534765 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
SF3B2-216ENST00000534765 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
SF3B2-216ENST00000534765 ROCK1Q13464 1354 aa12.8□□□□□ -0.36
SF3B2-216ENST00000534765 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
SF3B2-216ENST00000534765 MPHOSPH9Q99550 1183 aa12.8□□□□□ -0.36
SF3B2-216ENST00000534765 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
SF3B2-216ENST00000534765 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
SF3B2-216ENST00000534765 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
SF3B2-216ENST00000534765 NBR1Q14596 966 aa12.77□□□□□ -0.36
SF3B2-216ENST00000534765 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
SF3B2-216ENST00000534765 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
SF3B2-216ENST00000534765 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
SF3B2-216ENST00000534765 FKBP8Q14318 412 aa12.75□□□□□ -0.37
SF3B2-216ENST00000534765 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
SF3B2-216ENST00000534765 PLCH2O75038 1416 aa12.74□□□□□ -0.37
SF3B2-216ENST00000534765 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
SF3B2-216ENST00000534765 ABCC1P33527 1531 aa12.73□□□□□ -0.37
SF3B2-216ENST00000534765 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
SF3B2-216ENST00000534765 ANKRD30BQ9BXX2 1392 aa12.73□□□□□ -0.37
SF3B2-216ENST00000534765 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
SF3B2-216ENST00000534765 PPP1R15AO75807 674 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-216ENST00000534765 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
SF3B2-216ENST00000534765 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
SF3B2-216ENST00000534765 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
SF3B2-216ENST00000534765 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
SF3B2-216ENST00000534765 ABCA9Q8IUA7 1624 aa12.72□□□□□ -0.37
SF3B2-216ENST00000534765 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
SF3B2-216ENST00000534765 KIF15Q9NS87 1388 aa12.71□□□□□ -0.37
SF3B2-216ENST00000534765 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.38
SF3B2-216ENST00000534765 PLEKHH2Q8IVE3 1493 aa12.7□□□□□ -0.38
SF3B2-216ENST00000534765 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
SF3B2-216ENST00000534765 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
SF3B2-216ENST00000534765 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
SF3B2-216ENST00000534765 ANKRD30AQ9BXX3 1397 aa12.68□□□□□ -0.38
SF3B2-216ENST00000534765 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
SF3B2-216ENST00000534765 L3MBTL2Q969R5 705 aa12.68□□□□□ -0.38
SF3B2-216ENST00000534765 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
SF3B2-216ENST00000534765 PKD2Q13563 968 aa12.66□□□□□ -0.38
SF3B2-216ENST00000534765 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
SF3B2-216ENST00000534765 FANCAO15360 1455 aa12.66□□□□□ -0.38
SF3B2-216ENST00000534765 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
SF3B2-216ENST00000534765 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
SF3B2-216ENST00000534765 NUP155O75694 1391 aa12.65□□□□□ -0.39
SF3B2-216ENST00000534765 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
SF3B2-216ENST00000534765 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-216ENST00000534765 KIAA1107Q9UPP5 1409 aa12.64□□□□□ -0.39
SF3B2-216ENST00000534765 FAM135AQ9P2D6 1515 aa12.63□□□□□ -0.39
SF3B2-216ENST00000534765 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
SF3B2-216ENST00000534765 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
SF3B2-216ENST00000534765 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms