RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 RUFY1Q96T51 708 aa11.58□□□□□ -0.56
MALAT1-202ENST00000534336 RASSF8Q8NHQ8 419 aa11.57□□□□□ -0.56
MALAT1-202ENST00000534336 TMX4Q9H1E5 349 aaPredicted RBP11.57□□□□□ -0.56
MALAT1-202ENST00000534336 TPD52L1Q16890 204 aaPredicted RBP11.56□□□□□ -0.56
MALAT1-202ENST00000534336 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
MALAT1-202ENST00000534336 RGS3P49796 1198 aa11.55□□□□□ -0.56
MALAT1-202ENST00000534336 ACBD3Q9H3P7 528 aa11.55□□□□□ -0.56
MALAT1-202ENST00000534336 CREBRFQ8IUR6 639 aa11.55□□□□□ -0.56
MALAT1-202ENST00000534336 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
MALAT1-202ENST00000534336 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
MALAT1-202ENST00000534336 CCAR2Q8N163 923 aaKnown RBP11.53□□□□□ -0.56
MALAT1-202ENST00000534336 PPP4R2Q9NY27 417 aa11.53□□□□□ -0.56
MALAT1-202ENST00000534336 MYO6Q9UM54 1294 aa11.52□□□□□ -0.56
MALAT1-202ENST00000534336 KIF3AQ9Y496 699 aa11.52□□□□□ -0.56
MALAT1-202ENST00000534336 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
MALAT1-202ENST00000534336 GOLGA6L19H0YKK7 550 aa11.52□□□□□ -0.57
MALAT1-202ENST00000534336 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
MALAT1-202ENST00000534336 NUDCQ9Y266 331 aa11.52□□□□□ -0.57
MALAT1-202ENST00000534336 IPO7O95373 1038 aaKnown RBP11.51□□□□□ -0.57
MALAT1-202ENST00000534336 DYDC1Q8WWB3 177 aa11.51□□□□□ -0.57
MALAT1-202ENST00000534336 INCENPQ9NQS7 918 aa11.51□□□□□ -0.57
MALAT1-202ENST00000534336 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
MALAT1-202ENST00000534336 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
MALAT1-202ENST00000534336 SEPT11Q9NVA2 429 aaKnown RBP11.5□□□□□ -0.57
MALAT1-202ENST00000534336 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
MALAT1-202ENST00000534336 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57not detected■□□□□ 8.9
MALAT1-202ENST00000534336 HOMEZQ8IX15 550 aa11.49□□□□□ -0.57
MALAT1-202ENST00000534336 H0YHG0 523 aa11.49□□□□□ -0.57
MALAT1-202ENST00000534336 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
MALAT1-202ENST00000534336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.57not detected■□□□□ 9.1
MALAT1-202ENST00000534336 TCEAL9Q9UHQ7 104 aa11.48□□□□□ -0.57
MALAT1-202ENST00000534336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.48□□□□□ -0.57not detected■□□□□ 10
MALAT1-202ENST00000534336 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
MALAT1-202ENST00000534336 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
MALAT1-202ENST00000534336 FRAT1Q92837 279 aaPredicted RBP11.47□□□□□ -0.57
MALAT1-202ENST00000534336 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
MALAT1-202ENST00000534336 HSP90B2PQ58FF3 399 aa11.47□□□□□ -0.57
MALAT1-202ENST00000534336 ODF2Q5BJF6 829 aa11.47□□□□□ -0.57
MALAT1-202ENST00000534336 MTERF4Q7Z6M4 381 aaKnown RBP11.47□□□□□ -0.57
MALAT1-202ENST00000534336 ARGLU1Q9NWB6 273 aaPredicted RBP11.47□□□□□ -0.57
MALAT1-202ENST00000534336 TAF3Q5VWG9 929 aa11.46□□□□□ -0.57
MALAT1-202ENST00000534336 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.57
MALAT1-202ENST00000534336 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
MALAT1-202ENST00000534336 CCDC66A2RUB6 948 aa11.46□□□□□ -0.57
MALAT1-202ENST00000534336 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
MALAT1-202ENST00000534336 VPS53Q5VIR6 699 aa11.46□□□□□ -0.57
MALAT1-202ENST00000534336 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
MALAT1-202ENST00000534336 HOOK1Q9UJC3 728 aaKnown RBP11.45□□□□□ -0.58
MALAT1-202ENST00000534336 CCDC173Q0VFZ6 552 aa11.44□□□□□ -0.58
MALAT1-202ENST00000534336 MARCH6O60337 910 aa11.44□□□□□ -0.58
MALAT1-202ENST00000534336 ZNF526Q8TF50 670 aaPredicted RBP11.43□□□□□ -0.58
MALAT1-202ENST00000534336 GOLGA6L7A0A1B0GV03 622 aa11.43□□□□□ -0.58
MALAT1-202ENST00000534336 SF3A1Q15459 793 aaKnown RBP11.42□□□□□ -0.58
MALAT1-202ENST00000534336 ATP6V1DQ9Y5K8 247 aa11.42□□□□□ -0.58
MALAT1-202ENST00000534336 PLCD4Q9BRC7 762 aa11.41□□□□□ -0.58
MALAT1-202ENST00000534336 TCERG1O14776 1098 aaKnown RBP11.41□□□□□ -0.58
MALAT1-202ENST00000534336 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
MALAT1-202ENST00000534336 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
MALAT1-202ENST00000534336 CHMP4AQ9BY43 222 aa11.4□□□□□ -0.58
MALAT1-202ENST00000534336 ST18O60284 1047 aa11.4□□□□□ -0.58
MALAT1-202ENST00000534336 CT47A1Q5JQC4 288 aaPredicted RBP11.4□□□□□ -0.58
MALAT1-202ENST00000534336 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
MALAT1-202ENST00000534336 IPO8O15397 1037 aaKnown RBP11.4□□□□□ -0.58
MALAT1-202ENST00000534336 ERCC4Q92889 916 aaPredicted RBP11.4□□□□□ -0.58
MALAT1-202ENST00000534336 HSP90AB3PQ58FF7 597 aa11.4□□□□□ -0.59
MALAT1-202ENST00000534336 MYO10Q9HD67 2058 aa11.4□□□□□ -0.59
MALAT1-202ENST00000534336 BECN2A8MW95 431 aa11.39□□□□□ -0.59
MALAT1-202ENST00000534336 H3BQV1 296 aa11.39□□□□□ -0.59
MALAT1-202ENST00000534336 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
MALAT1-202ENST00000534336 CLASRPQ8N2M8 674 aaKnown RBP11.39□□□□□ -0.59
MALAT1-202ENST00000534336 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
MALAT1-202ENST00000534336 SKOR2Q2VWA4 1001 aaPredicted RBP11.38□□□□□ -0.59
MALAT1-202ENST00000534336 TSPY4P0CV99 314 aa11.38□□□□□ -0.59
MALAT1-202ENST00000534336 TSPY10P0CW01 314 aa11.38□□□□□ -0.59
MALAT1-202ENST00000534336 LEKR1Q6ZMV7 388 aa11.38□□□□□ -0.59
MALAT1-202ENST00000534336 HOMER1Q86YM7 354 aa11.38□□□□□ -0.59
MALAT1-202ENST00000534336 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
MALAT1-202ENST00000534336 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
MALAT1-202ENST00000534336 ZNF592Q92610 1267 aa11.38□□□□□ -0.59
MALAT1-202ENST00000534336 G3V3G9 751 aa11.37□□□□□ -0.59
MALAT1-202ENST00000534336 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
MALAT1-202ENST00000534336 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
MALAT1-202ENST00000534336 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
MALAT1-202ENST00000534336 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
MALAT1-202ENST00000534336 HSP90AB2PQ58FF8 381 aa11.37□□□□□ -0.59
MALAT1-202ENST00000534336 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
MALAT1-202ENST00000534336 USP8P40818 1118 aa11.36□□□□□ -0.59
MALAT1-202ENST00000534336 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
MALAT1-202ENST00000534336 BCCIPQ9P287 314 aaKnown RBP eCLIP11.35□□□□□ -0.59
MALAT1-202ENST00000534336 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
MALAT1-202ENST00000534336 EPS15P42566 896 aa11.35□□□□□ -0.59
MALAT1-202ENST00000534336 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
MALAT1-202ENST00000534336 SEPT7Q16181 437 aaKnown RBP11.35□□□□□ -0.59
MALAT1-202ENST00000534336 NEUROD2Q15784 382 aa11.34□□□□□ -0.59
MALAT1-202ENST00000534336 GOLGA6L10A6NI86 522 aa11.34□□□□□ -0.59
MALAT1-202ENST00000534336 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
MALAT1-202ENST00000534336 KIAA0754O94854 1291 aa11.34□□□□□ -0.59
MALAT1-202ENST00000534336 EZRP15311 586 aaKnown RBP11.34□□□□□ -0.59
MALAT1-202ENST00000534336 NAP1L1P55209 391 aaKnown RBP11.34□□□□□ -0.59
MALAT1-202ENST00000534336 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms