RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 FER1L4A9Z1Z3 1794 aa24.96■■□□□ 1.59
CTSB-230ENST00000534149 MLECQ14165 292 aa24.96■■□□□ 1.59
CTSB-230ENST00000534149 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
CTSB-230ENST00000534149 ATP1B4Q9UN42 357 aaPredicted RBP24.91■■□□□ 1.58
CTSB-230ENST00000534149 MYO5CQ9NQX4 1742 aa24.91■■□□□ 1.58
CTSB-230ENST00000534149 FMN1Q68DA7 1419 aa24.88■■□□□ 1.57
CTSB-230ENST00000534149 KIF14Q15058 1648 aa24.87■■□□□ 1.57
CTSB-230ENST00000534149 ATP10AO60312 1499 aa24.87■■□□□ 1.57
CTSB-230ENST00000534149 C9orf84Q5VXU9 1444 aa24.86■■□□□ 1.57
CTSB-230ENST00000534149 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
CTSB-230ENST00000534149 ARHGEF12Q9NZN5 1544 aa24.86■■□□□ 1.57
CTSB-230ENST00000534149 ARHGAP35Q9NRY4 1499 aa24.85■■□□□ 1.57
CTSB-230ENST00000534149 EFCAB2Q5VUJ9 269 aa24.85■■□□□ 1.57
CTSB-230ENST00000534149 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
CTSB-230ENST00000534149 ARHGAP5Q13017 1502 aa24.8■■□□□ 1.56
CTSB-230ENST00000534149 TROQ12816 1431 aaPredicted RBP24.79■■□□□ 1.56
CTSB-230ENST00000534149 PREX1Q8TCU6 1659 aa24.79■■□□□ 1.56
CTSB-230ENST00000534149 ZNF518AQ6AHZ1 1483 aa24.79■■□□□ 1.56
CTSB-230ENST00000534149 LRRIQ1Q96JM4 1722 aa24.78■■□□□ 1.56
CTSB-230ENST00000534149 KDM5CP41229 1560 aa24.77■■□□□ 1.56
CTSB-230ENST00000534149 CEBPAP49715 358 aaPredicted RBP24.77■■□□□ 1.56
CTSB-230ENST00000534149 CERKQ8TCT0 537 aa24.77■■□□□ 1.56
CTSB-230ENST00000534149 AFAP1Q8N556 730 aa24.75■■□□□ 1.55
CTSB-230ENST00000534149 CLIP1P30622 1438 aa24.75■■□□□ 1.55
CTSB-230ENST00000534149 DIP2CQ9Y2E4 1556 aa24.72■■□□□ 1.55
CTSB-230ENST00000534149 MYT1LQ9UL68 1186 aa24.72■■□□□ 1.55
CTSB-230ENST00000534149 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
CTSB-230ENST00000534149 ABCA6Q8N139 1617 aa24.69■■□□□ 1.54
CTSB-230ENST00000534149 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
CTSB-230ENST00000534149 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
CTSB-230ENST00000534149 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
CTSB-230ENST00000534149 UHRF1BP1Q6BDS2 1440 aa24.66■■□□□ 1.54
CTSB-230ENST00000534149 SETD1BQ9UPS6 1966 aaKnown RBP24.65■■□□□ 1.54
CTSB-230ENST00000534149 ABCC1P33527 1531 aa24.64■■□□□ 1.53
CTSB-230ENST00000534149 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.53
CTSB-230ENST00000534149 TRAPPC8Q9Y2L5 1435 aa24.63■■□□□ 1.53
CTSB-230ENST00000534149 C3P01024 1663 aa24.62■■□□□ 1.53
CTSB-230ENST00000534149 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
CTSB-230ENST00000534149 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
CTSB-230ENST00000534149 CCDC18Q5T9S5 1454 aa24.59■■□□□ 1.53
CTSB-230ENST00000534149 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
CTSB-230ENST00000534149 AGLP35573 1532 aa24.59■■□□□ 1.53
CTSB-230ENST00000534149 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
CTSB-230ENST00000534149 CDC42BPAQ5VT25 1732 aa24.57■■□□□ 1.52
CTSB-230ENST00000534149 KIDINS220Q9ULH0 1771 aa24.57■■□□□ 1.52
CTSB-230ENST00000534149 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
CTSB-230ENST00000534149 PTPRTO14522 1441 aa24.5■■□□□ 1.51
CTSB-230ENST00000534149 SAMD9LQ8IVG5 1584 aa24.49■■□□□ 1.51
CTSB-230ENST00000534149 FYCO1Q9BQS8 1478 aa24.48■■□□□ 1.51
CTSB-230ENST00000534149 CNTLNQ9NXG0 1405 aa24.48■■□□□ 1.51
CTSB-230ENST00000534149 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
CTSB-230ENST00000534149 SYCP2Q9BX26 1530 aa24.46■■□□□ 1.51
CTSB-230ENST00000534149 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
CTSB-230ENST00000534149 DISP3Q9P2K9 1392 aa24.43■■□□□ 1.5
CTSB-230ENST00000534149 MROH2AA6NES4 1674 aa24.43■■□□□ 1.5
CTSB-230ENST00000534149 GPATCH8Q9UKJ3 1502 aaKnown RBP24.42■■□□□ 1.5
CTSB-230ENST00000534149 SUPT6HQ7KZ85 1726 aaKnown RBP24.42■■□□□ 1.5
CTSB-230ENST00000534149 LTBP4Q8N2S1 1624 aa24.42■■□□□ 1.5
CTSB-230ENST00000534149 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
CTSB-230ENST00000534149 NPATQ14207 1427 aa24.39■■□□□ 1.5
CTSB-230ENST00000534149 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.49
CTSB-230ENST00000534149 CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.49
CTSB-230ENST00000534149 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
CTSB-230ENST00000534149 ILDR2Q71H61 639 aa24.37■■□□□ 1.49
CTSB-230ENST00000534149 ZMYM3Q14202 1370 aa24.37■■□□□ 1.49
CTSB-230ENST00000534149 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
CTSB-230ENST00000534149 CLTCQ00610 1675 aaKnown RBP24.36■■□□□ 1.49
CTSB-230ENST00000534149 PLXNC1O60486 1568 aa24.34■■□□□ 1.49
CTSB-230ENST00000534149 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.49
CTSB-230ENST00000534149 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
CTSB-230ENST00000534149 PLEKHH2Q8IVE3 1493 aa24.32■■□□□ 1.48
CTSB-230ENST00000534149 CFDP1Q9UEE9 299 aaPredicted RBP24.32■■□□□ 1.48
CTSB-230ENST00000534149 A2MP01023 1474 aa24.32■■□□□ 1.48
CTSB-230ENST00000534149 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
CTSB-230ENST00000534149 SPATA31D1Q6ZQQ2 1576 aa24.31■■□□□ 1.48
CTSB-230ENST00000534149 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
CTSB-230ENST00000534149 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
CTSB-230ENST00000534149 NCKAP5LQ9HCH0 1330 aa24.3■■□□□ 1.48
CTSB-230ENST00000534149 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
CTSB-230ENST00000534149 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
CTSB-230ENST00000534149 CEP170BQ9Y4F5 1589 aaPredicted RBP24.26■■□□□ 1.47
CTSB-230ENST00000534149 GGT6Q6P531 493 aa24.26■■□□□ 1.47
CTSB-230ENST00000534149 ZNF335Q9H4Z2 1342 aaPredicted RBP24.25■■□□□ 1.47
CTSB-230ENST00000534149 ADGBQ8N7X0 1667 aa24.24■■□□□ 1.47
CTSB-230ENST00000534149 SOCS7O14512 581 aa24.23■■□□□ 1.47
CTSB-230ENST00000534149 PLA2R1Q13018 1463 aa24.23■■□□□ 1.47
CTSB-230ENST00000534149 TIAM1Q13009 1591 aa24.23■■□□□ 1.47
CTSB-230ENST00000534149 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
CTSB-230ENST00000534149 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.47
CTSB-230ENST00000534149 PKD2Q13563 968 aa24.2■■□□□ 1.46
CTSB-230ENST00000534149 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
CTSB-230ENST00000534149 MBD5Q9P267 1494 aa24.17■■□□□ 1.46
CTSB-230ENST00000534149 UBAP1LF5GYI3 381 aa24.16■■□□□ 1.46
CTSB-230ENST00000534149 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
CTSB-230ENST00000534149 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
CTSB-230ENST00000534149 DNMT1P26358 1616 aaKnown RBP24.13■■□□□ 1.45
CTSB-230ENST00000534149 RTEL1-TNFRSF6BF6WH68 1400 aa24.12■■□□□ 1.45
CTSB-230ENST00000534149 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
CTSB-230ENST00000534149 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
CTSB-230ENST00000534149 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms