RNA–Protein interactions for RNA: ENST00000534078.1

MRPL49-209, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2 BASIC

Gene MRPL49, Length 518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-209ENST00000534078 ARHGEF12Q9NZN5 1544 aa22.38■■□□□ 1.17
MRPL49-209ENST00000534078 ILDR2Q71H61 639 aa22.37■■□□□ 1.17
MRPL49-209ENST00000534078 PREX1Q8TCU6 1659 aa22.36■■□□□ 1.17
MRPL49-209ENST00000534078 SCAPERQ9BY12 1400 aa22.35■■□□□ 1.17
MRPL49-209ENST00000534078 PLCH2O75038 1416 aa22.34■■□□□ 1.17
MRPL49-209ENST00000534078 CDK13Q14004 1512 aaKnown RBP22.34■■□□□ 1.17
MRPL49-209ENST00000534078 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
MRPL49-209ENST00000534078 ATP10AO60312 1499 aa22.32■■□□□ 1.16
MRPL49-209ENST00000534078 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
MRPL49-209ENST00000534078 SETD1BQ9UPS6 1966 aaKnown RBP22.28■■□□□ 1.16
MRPL49-209ENST00000534078 MYO5CQ9NQX4 1742 aa22.25■■□□□ 1.15
MRPL49-209ENST00000534078 DISP3Q9P2K9 1392 aa22.24■■□□□ 1.15
MRPL49-209ENST00000534078 SOCS7O14512 581 aa22.22■■□□□ 1.15
MRPL49-209ENST00000534078 KIF14Q15058 1648 aa22.21■■□□□ 1.15
MRPL49-209ENST00000534078 EEA1Q15075 1411 aa22.21■■□□□ 1.15
MRPL49-209ENST00000534078 KDM5CP41229 1560 aa22.2■■□□□ 1.14
MRPL49-209ENST00000534078 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
MRPL49-209ENST00000534078 C3P01024 1663 aa22.18■■□□□ 1.14
MRPL49-209ENST00000534078 AFAP1Q8N556 730 aa22.18■■□□□ 1.14
MRPL49-209ENST00000534078 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
MRPL49-209ENST00000534078 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
MRPL49-209ENST00000534078 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
MRPL49-209ENST00000534078 LTBP4Q8N2S1 1624 aa22.15■■□□□ 1.14
MRPL49-209ENST00000534078 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
MRPL49-209ENST00000534078 LRRIQ1Q96JM4 1722 aa22.14■■□□□ 1.14
MRPL49-209ENST00000534078 REREQ9P2R6 1566 aa22.14■■□□□ 1.13
MRPL49-209ENST00000534078 PTPRTO14522 1441 aa22.14■■□□□ 1.13
MRPL49-209ENST00000534078 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
MRPL49-209ENST00000534078 CDC42BPBQ9Y5S2 1711 aa22.13■■□□□ 1.13
MRPL49-209ENST00000534078 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
MRPL49-209ENST00000534078 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
MRPL49-209ENST00000534078 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
MRPL49-209ENST00000534078 MLH3Q9UHC1 1453 aa22.08■■□□□ 1.12
MRPL49-209ENST00000534078 TROQ12816 1431 aaPredicted RBP22.07■■□□□ 1.12
MRPL49-209ENST00000534078 AGLP35573 1532 aa22.06■■□□□ 1.12
MRPL49-209ENST00000534078 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
MRPL49-209ENST00000534078 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
MRPL49-209ENST00000534078 TRAPPC8Q9Y2L5 1435 aa22.04■■□□□ 1.12
MRPL49-209ENST00000534078 KIDINS220Q9ULH0 1771 aa22.03■■□□□ 1.12
MRPL49-209ENST00000534078 NCOA1Q15788 1441 aa22.03■■□□□ 1.12
MRPL49-209ENST00000534078 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
MRPL49-209ENST00000534078 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
MRPL49-209ENST00000534078 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
MRPL49-209ENST00000534078 ABCC1P33527 1531 aa22.01■■□□□ 1.11
MRPL49-209ENST00000534078 PREX2Q70Z35 1606 aa21.99■■□□□ 1.11
MRPL49-209ENST00000534078 MYT1LQ9UL68 1186 aa21.98■■□□□ 1.11
MRPL49-209ENST00000534078 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
MRPL49-209ENST00000534078 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
MRPL49-209ENST00000534078 CDC42BPAQ5VT25 1732 aa21.94■■□□□ 1.1
MRPL49-209ENST00000534078 CLIP1P30622 1438 aa21.94■■□□□ 1.1
MRPL49-209ENST00000534078 MROH2AA6NES4 1674 aa21.93■■□□□ 1.1
MRPL49-209ENST00000534078 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
MRPL49-209ENST00000534078 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
MRPL49-209ENST00000534078 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
MRPL49-209ENST00000534078 NPATQ14207 1427 aa21.89■■□□□ 1.1
MRPL49-209ENST00000534078 ZNF335Q9H4Z2 1342 aaPredicted RBP21.89■■□□□ 1.1
MRPL49-209ENST00000534078 NCKAP5LQ9HCH0 1330 aa21.89■■□□□ 1.1
MRPL49-209ENST00000534078 SAMD9LQ8IVG5 1584 aa21.89■■□□□ 1.09
MRPL49-209ENST00000534078 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
MRPL49-209ENST00000534078 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
MRPL49-209ENST00000534078 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
MRPL49-209ENST00000534078 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
MRPL49-209ENST00000534078 MYO3AQ8NEV4 1616 aa21.83■■□□□ 1.08
MRPL49-209ENST00000534078 CASKIN1Q8WXD9 1431 aa21.82■■□□□ 1.08
MRPL49-209ENST00000534078 TCOF1Q13428 1488 aaKnown RBP21.82■■□□□ 1.08
MRPL49-209ENST00000534078 PLXNC1O60486 1568 aa21.8■■□□□ 1.08
MRPL49-209ENST00000534078 PLA2R1Q13018 1463 aa21.8■■□□□ 1.08
MRPL49-209ENST00000534078 UBAP1LF5GYI3 381 aa21.8■■□□□ 1.08
MRPL49-209ENST00000534078 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
MRPL49-209ENST00000534078 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
MRPL49-209ENST00000534078 CCDC18Q5T9S5 1454 aa21.79■■□□□ 1.08
MRPL49-209ENST00000534078 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
MRPL49-209ENST00000534078 HNRNPMP52272 730 aaKnown RBP eCLIP21.78■■□□□ 1.08
MRPL49-209ENST00000534078 GPATCH8Q9UKJ3 1502 aaKnown RBP21.78■■□□□ 1.08
MRPL49-209ENST00000534078 PKD2Q13563 968 aa21.77■■□□□ 1.08
MRPL49-209ENST00000534078 INO80Q9ULG1 1556 aaPredicted RBP21.76■■□□□ 1.07
MRPL49-209ENST00000534078 SPAG9O60271 1321 aaKnown RBP21.76■■□□□ 1.07
MRPL49-209ENST00000534078 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
MRPL49-209ENST00000534078 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
MRPL49-209ENST00000534078 A2MP01023 1474 aa21.72■■□□□ 1.07
MRPL49-209ENST00000534078 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
MRPL49-209ENST00000534078 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
MRPL49-209ENST00000534078 HSPA1LP34931 641 aa21.68■■□□□ 1.06
MRPL49-209ENST00000534078 GGT6Q6P531 493 aa21.68■■□□□ 1.06
MRPL49-209ENST00000534078 MED1Q15648 1581 aaPredicted RBP21.67■■□□□ 1.06
MRPL49-209ENST00000534078 FYCO1Q9BQS8 1478 aa21.67■■□□□ 1.06
MRPL49-209ENST00000534078 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
MRPL49-209ENST00000534078 NEURL4Q96JN8 1562 aa21.66■■□□□ 1.06
MRPL49-209ENST00000534078 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
MRPL49-209ENST00000534078 A2ML1A8K2U0 1454 aa21.65■■□□□ 1.06
MRPL49-209ENST00000534078 POLR1AO95602 1720 aaPredicted RBP21.64■■□□□ 1.06
MRPL49-209ENST00000534078 ALKQ9UM73 1620 aa21.63■■□□□ 1.05
MRPL49-209ENST00000534078 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
MRPL49-209ENST00000534078 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
MRPL49-209ENST00000534078 CFDP1Q9UEE9 299 aaPredicted RBP21.61■■□□□ 1.05
MRPL49-209ENST00000534078 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
MRPL49-209ENST00000534078 MBD5Q9P267 1494 aa21.6■■□□□ 1.05
MRPL49-209ENST00000534078 PIP4K2BP78356 416 aa21.59■■□□□ 1.05
MRPL49-209ENST00000534078 FBXO31Q5XUX0 539 aaPredicted RBP21.59■■□□□ 1.05
MRPL49-209ENST00000534078 SHANK2Q9UPX8 1470 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms