RNA–Protein interactions for RNA: ENST00000532032.5

ATXN3-215, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-215ENST00000532032 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
ATXN3-215ENST00000532032 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
ATXN3-215ENST00000532032 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
ATXN3-215ENST00000532032 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
ATXN3-215ENST00000532032 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.29
ATXN3-215ENST00000532032 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
ATXN3-215ENST00000532032 KRTAP3-3Q9BYR6 98 aa13.24□□□□□ -0.29
ATXN3-215ENST00000532032 KRTAP3-2Q9BYR7 98 aa13.24□□□□□ -0.29
ATXN3-215ENST00000532032 ERBB3P21860 1342 aa13.22□□□□□ -0.29
ATXN3-215ENST00000532032 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
ATXN3-215ENST00000532032 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
ATXN3-215ENST00000532032 KIF3CO14782 793 aa13.18□□□□□ -0.3
ATXN3-215ENST00000532032 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
ATXN3-215ENST00000532032 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
ATXN3-215ENST00000532032 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
ATXN3-215ENST00000532032 PPP1R37O75864 691 aa13.13□□□□□ -0.31
ATXN3-215ENST00000532032 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
ATXN3-215ENST00000532032 TMC2Q8TDI7 906 aa13.09□□□□□ -0.31
ATXN3-215ENST00000532032 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
ATXN3-215ENST00000532032 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
ATXN3-215ENST00000532032 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.32
ATXN3-215ENST00000532032 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
ATXN3-215ENST00000532032 SLC34A2O95436 690 aa13.03□□□□□ -0.32
ATXN3-215ENST00000532032 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
ATXN3-215ENST00000532032 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
ATXN3-215ENST00000532032 NUDT7P0C024 238 aa12.97□□□□□ -0.33
ATXN3-215ENST00000532032 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
ATXN3-215ENST00000532032 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
ATXN3-215ENST00000532032 RYDENQ9NUL5 291 aaKnown RBP12.93□□□□□ -0.34
ATXN3-215ENST00000532032 FOXK1P85037 733 aa12.92□□□□□ -0.34
ATXN3-215ENST00000532032 LHX6Q9UPM6 363 aa12.91□□□□□ -0.34
ATXN3-215ENST00000532032 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
ATXN3-215ENST00000532032 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
ATXN3-215ENST00000532032 DSG2Q14126 1118 aa12.87□□□□□ -0.35
ATXN3-215ENST00000532032 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
ATXN3-215ENST00000532032 PBX2P40425 430 aa12.85□□□□□ -0.35
ATXN3-215ENST00000532032 PTGER2P43116 358 aa12.85□□□□□ -0.35
ATXN3-215ENST00000532032 ANKRD13DQ6ZTN6 518 aa12.85□□□□□ -0.35
ATXN3-215ENST00000532032 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
ATXN3-215ENST00000532032 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATXN3-215ENST00000532032 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
ATXN3-215ENST00000532032 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
ATXN3-215ENST00000532032 POTEEQ6S8J3 1075 aa12.8□□□□□ -0.36
ATXN3-215ENST00000532032 TBC1D12O60347 775 aa12.79□□□□□ -0.36
ATXN3-215ENST00000532032 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
ATXN3-215ENST00000532032 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
ATXN3-215ENST00000532032 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
ATXN3-215ENST00000532032 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
ATXN3-215ENST00000532032 ARHGAP33O14559 1287 aa12.73□□□□□ -0.37
ATXN3-215ENST00000532032 PPP1R15BQ5SWA1 713 aa12.73□□□□□ -0.37
ATXN3-215ENST00000532032 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
ATXN3-215ENST00000532032 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
ATXN3-215ENST00000532032 PDE4AP27815 886 aa12.72□□□□□ -0.37
ATXN3-215ENST00000532032 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
ATXN3-215ENST00000532032 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
ATXN3-215ENST00000532032 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
ATXN3-215ENST00000532032 PSEN2P49810 448 aa12.64□□□□□ -0.39
ATXN3-215ENST00000532032 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
ATXN3-215ENST00000532032 TK2O00142 265 aa12.63□□□□□ -0.39
ATXN3-215ENST00000532032 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
ATXN3-215ENST00000532032 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
ATXN3-215ENST00000532032 MFSD10Q14728 455 aa12.61□□□□□ -0.39
ATXN3-215ENST00000532032 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
ATXN3-215ENST00000532032 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
ATXN3-215ENST00000532032 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
ATXN3-215ENST00000532032 HRO43593 1189 aa12.57□□□□□ -0.4
ATXN3-215ENST00000532032 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
ATXN3-215ENST00000532032 FOSBP53539 338 aa12.56□□□□□ -0.4
ATXN3-215ENST00000532032 EVI5O60447 810 aa12.55□□□□□ -0.4
ATXN3-215ENST00000532032 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
ATXN3-215ENST00000532032 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
ATXN3-215ENST00000532032 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
ATXN3-215ENST00000532032 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
ATXN3-215ENST00000532032 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
ATXN3-215ENST00000532032 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
ATXN3-215ENST00000532032 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
ATXN3-215ENST00000532032 PTPREP23469 700 aa12.48□□□□□ -0.41
ATXN3-215ENST00000532032 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
ATXN3-215ENST00000532032 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
ATXN3-215ENST00000532032 ZDHHC16Q969W1 377 aa12.47□□□□□ -0.41
ATXN3-215ENST00000532032 SLC4A5Q9BY07 1137 aa12.47□□□□□ -0.41
ATXN3-215ENST00000532032 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
ATXN3-215ENST00000532032 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
ATXN3-215ENST00000532032 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
ATXN3-215ENST00000532032 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
ATXN3-215ENST00000532032 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
ATXN3-215ENST00000532032 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
ATXN3-215ENST00000532032 PCDHGA10Q9Y5H3 936 aa12.39□□□□□ -0.43
ATXN3-215ENST00000532032 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
ATXN3-215ENST00000532032 PHF14O94880 888 aa12.36□□□□□ -0.43
ATXN3-215ENST00000532032 FBXW7Q969H0 707 aa12.35□□□□□ -0.43
ATXN3-215ENST00000532032 DPYSL4O14531 572 aa12.34□□□□□ -0.43
ATXN3-215ENST00000532032 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
ATXN3-215ENST00000532032 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
ATXN3-215ENST00000532032 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
ATXN3-215ENST00000532032 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
ATXN3-215ENST00000532032 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
ATXN3-215ENST00000532032 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
ATXN3-215ENST00000532032 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
ATXN3-215ENST00000532032 GOLGA8CPA6NN73 597 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms