RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RNF25Q96BH1 459 aaPredicted RBP7.87□□□□□ -1.15
AC055878.1-201ENST00000531858 VGFO15240 615 aaPredicted RBP7.85□□□□□ -1.15
AC055878.1-201ENST00000531858 BRPF1P55201 1214 aaPredicted RBP7.85□□□□□ -1.15
AC055878.1-201ENST00000531858 C3orf67Q6ZVT6 689 aa7.84□□□□□ -1.15
AC055878.1-201ENST00000531858 PODXL2Q9NZ53 605 aa7.84□□□□□ -1.15
AC055878.1-201ENST00000531858 HS3ST6Q96QI5 342 aa7.82□□□□□ -1.16
AC055878.1-201ENST00000531858 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
AC055878.1-201ENST00000531858 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
AC055878.1-201ENST00000531858 STK25O00506 426 aa7.81□□□□□ -1.16
AC055878.1-201ENST00000531858 FAM205CA6NFA0 338 aa7.8□□□□□ -1.16
AC055878.1-201ENST00000531858 SUPT5HO00267 1087 aaKnown RBP7.79□□□□□ -1.16
AC055878.1-201ENST00000531858 WDR70Q9NW82 654 aa7.79□□□□□ -1.16
AC055878.1-201ENST00000531858 CHRM1P11229 460 aaPredicted RBP7.77□□□□□ -1.17
AC055878.1-201ENST00000531858 L3MBTL3Q96JM7 780 aaPredicted RBP7.77□□□□□ -1.17
AC055878.1-201ENST00000531858 NEUROD2Q15784 382 aa7.76□□□□□ -1.17
AC055878.1-201ENST00000531858 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
AC055878.1-201ENST00000531858 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
AC055878.1-201ENST00000531858 PYGBP11216 843 aa7.74□□□□□ -1.17
AC055878.1-201ENST00000531858 GOLGA2Q08379 1002 aa7.74□□□□□ -1.17
AC055878.1-201ENST00000531858 PDCD7Q8N8D1 485 aaKnown RBP7.74□□□□□ -1.17
AC055878.1-201ENST00000531858 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
AC055878.1-201ENST00000531858 MKRN3Q13064 507 aaKnown RBP7.73□□□□□ -1.17
AC055878.1-201ENST00000531858 DCAF8Q5TAQ9 597 aa7.72□□□□□ -1.17
AC055878.1-201ENST00000531858 ZC3H15Q8WU90 426 aaKnown RBP7.72□□□□□ -1.17
AC055878.1-201ENST00000531858 PCDHB8Q9UN66 801 aa7.72□□□□□ -1.17
AC055878.1-201ENST00000531858 ARHGEF1Q92888 912 aaKnown RBP7.71□□□□□ -1.18
AC055878.1-201ENST00000531858 STK24Q9Y6E0 443 aa7.7□□□□□ -1.18
AC055878.1-201ENST00000531858 RNF166Q96A37 237 aaPredicted RBP7.69□□□□□ -1.18
AC055878.1-201ENST00000531858 BCL11BQ9C0K0 894 aaPredicted RBP7.69□□□□□ -1.18
AC055878.1-201ENST00000531858 ZMYND15Q9H091 742 aa7.68□□□□□ -1.18
AC055878.1-201ENST00000531858 RSPH6AQ9H0K4 717 aa7.68□□□□□ -1.18
AC055878.1-201ENST00000531858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.68□□□□□ -1.18
AC055878.1-201ENST00000531858 ZNF467Q7Z7K2 595 aaPredicted RBP7.67□□□□□ -1.18
AC055878.1-201ENST00000531858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.66□□□□□ -1.18
AC055878.1-201ENST00000531858 ZFP91Q96JP5 570 aaPredicted RBP7.66□□□□□ -1.18
AC055878.1-201ENST00000531858 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
AC055878.1-201ENST00000531858 ZNF710Q8N1W2 664 aa7.65□□□□□ -1.18
AC055878.1-201ENST00000531858 SLC24A3Q9HC58 644 aa7.65□□□□□ -1.18
AC055878.1-201ENST00000531858 G3V3G9 751 aa7.64□□□□□ -1.19
AC055878.1-201ENST00000531858 ERBB3P21860 1342 aa7.63□□□□□ -1.19
AC055878.1-201ENST00000531858 TESPA1A2RU30 521 aaPredicted RBP7.63□□□□□ -1.19
AC055878.1-201ENST00000531858 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
AC055878.1-201ENST00000531858 NPM2Q86SE8 214 aaKnown RBP7.63□□□□□ -1.19
AC055878.1-201ENST00000531858 MYT1LQ9UL68 1186 aa7.63□□□□□ -1.19
AC055878.1-201ENST00000531858 ZMYND10O75800 440 aa7.62□□□□□ -1.19
AC055878.1-201ENST00000531858 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
AC055878.1-201ENST00000531858 TRIM26Q12899 539 aaPredicted RBP7.61□□□□□ -1.19
AC055878.1-201ENST00000531858 HOXB3P14651 431 aaPredicted RBP7.6□□□□□ -1.19
AC055878.1-201ENST00000531858 DOK7Q18PE1 504 aa7.6□□□□□ -1.19
AC055878.1-201ENST00000531858 CADPS2Q86UW7 1296 aa7.59□□□□□ -1.19
AC055878.1-201ENST00000531858 RIMBP2O15034 1052 aa7.58□□□□□ -1.2
AC055878.1-201ENST00000531858 PSEN1P49768 467 aa7.58□□□□□ -1.2
AC055878.1-201ENST00000531858 E2F4Q16254 413 aa7.58□□□□□ -1.2
AC055878.1-201ENST00000531858 BOLA1Q9Y3E2 137 aa7.58□□□□□ -1.2
AC055878.1-201ENST00000531858 PTGER2P43116 358 aa7.57□□□□□ -1.2
AC055878.1-201ENST00000531858 VARS2Q5ST30 1063 aaKnown RBP7.57□□□□□ -1.2
AC055878.1-201ENST00000531858 BARGINQ6ZT62 677 aa7.57□□□□□ -1.2
AC055878.1-201ENST00000531858 ILDR1Q86SU0 546 aaPredicted RBP7.57□□□□□ -1.2
AC055878.1-201ENST00000531858 DPY19L2Q6NUT2 758 aa7.55□□□□□ -1.2
AC055878.1-201ENST00000531858 AK7Q96M32 723 aa7.55□□□□□ -1.2
AC055878.1-201ENST00000531858 HRCP23327 699 aa7.54□□□□□ -1.2
AC055878.1-201ENST00000531858 SEMA3EO15041 775 aa7.53□□□□□ -1.2
AC055878.1-201ENST00000531858 ARIH1Q9Y4X5 557 aaPredicted RBP7.53□□□□□ -1.2
AC055878.1-201ENST00000531858 PDAP1Q13442 181 aaKnown RBP7.52□□□□□ -1.21
AC055878.1-201ENST00000531858 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
AC055878.1-201ENST00000531858 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
AC055878.1-201ENST00000531858 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
AC055878.1-201ENST00000531858 ZSWIM6Q9HCJ5 1215 aa7.49□□□□□ -1.21
AC055878.1-201ENST00000531858 CABP2Q9NPB3 220 aa7.49□□□□□ -1.21
AC055878.1-201ENST00000531858 PDIA4P13667 645 aaKnown RBP7.47□□□□□ -1.21
AC055878.1-201ENST00000531858 FLIIQ13045 1269 aa7.47□□□□□ -1.21
AC055878.1-201ENST00000531858 KDM4CQ9H3R0 1056 aa7.46□□□□□ -1.22
AC055878.1-201ENST00000531858 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
AC055878.1-201ENST00000531858 ANKRD13DQ6ZTN6 518 aa7.44□□□□□ -1.22
AC055878.1-201ENST00000531858 MFRPQ9BY79 579 aa7.44□□□□□ -1.22
AC055878.1-201ENST00000531858 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
AC055878.1-201ENST00000531858 KRI1Q8N9T8 703 aaKnown RBP7.42□□□□□ -1.22
AC055878.1-201ENST00000531858 GPR153Q6NV75 609 aa7.41□□□□□ -1.22
AC055878.1-201ENST00000531858 C1orf115Q9H7X2 142 aa7.41□□□□□ -1.22
AC055878.1-201ENST00000531858 PDE4AP27815 886 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 NLRP6P59044 892 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 PDE4DQ08499 809 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 MFSD10Q14728 455 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 GPIHBP1Q8IV16 184 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 ARID3AQ99856 593 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 PLA2G2EQ9NZK7 142 aa7.4□□□□□ -1.22
AC055878.1-201ENST00000531858 TRIM66O15016 1216 aa7.39□□□□□ -1.23
AC055878.1-201ENST00000531858 SOX12O15370 315 aa7.39□□□□□ -1.23
AC055878.1-201ENST00000531858 LSM11P83369 360 aaKnown RBP eCLIP7.39□□□□□ -1.23
AC055878.1-201ENST00000531858 A6NJR5 290 aa7.38□□□□□ -1.23
AC055878.1-201ENST00000531858 APBB1O00213 710 aa7.38□□□□□ -1.23
AC055878.1-201ENST00000531858 DDRGK1Q96HY6 314 aa7.38□□□□□ -1.23
AC055878.1-201ENST00000531858 CAMK2BQ13554 666 aa7.37□□□□□ -1.23
AC055878.1-201ENST00000531858 MICALL2Q8IY33 904 aa7.37□□□□□ -1.23
AC055878.1-201ENST00000531858 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
AC055878.1-201ENST00000531858 ZNF316A6NFI3 1004 aaPredicted RBP7.35□□□□□ -1.23
AC055878.1-201ENST00000531858 TMEM92Q6UXU6 159 aa7.35□□□□□ -1.23
AC055878.1-201ENST00000531858 FBXO22Q8NEZ5 403 aa7.35□□□□□ -1.23
AC055878.1-201ENST00000531858 ARSIQ5FYB1 569 aa7.34□□□□□ -1.23
AC055878.1-201ENST00000531858 KCTD17Q8N5Z5 321 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms