RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 POGZQ7Z3K3 1410 aa35.19■■■■□ 3.22
CHKA-206ENST00000531341 MAGI2Q86UL8 1455 aa35.16■■■■□ 3.22
CHKA-206ENST00000531341 ATP1B4Q9UN42 357 aaPredicted RBP35.16■■■■□ 3.22
CHKA-206ENST00000531341 UBTFP17480 764 aaKnown RBP35.08■■■■□ 3.21
CHKA-206ENST00000531341 ARHGAP35Q9NRY4 1499 aa35.05■■■■□ 3.2
CHKA-206ENST00000531341 EFCAB2Q5VUJ9 269 aa35.05■■■■□ 3.2
CHKA-206ENST00000531341 ATP10AO60312 1499 aa35.03■■■■□ 3.2
CHKA-206ENST00000531341 FMN1Q68DA7 1419 aa35.02■■■■□ 3.2
CHKA-206ENST00000531341 FER1L4A9Z1Z3 1794 aa35.01■■■■□ 3.2
CHKA-206ENST00000531341 KIF14Q15058 1648 aa34.99■■■■□ 3.19
CHKA-206ENST00000531341 CEBPAP49715 358 aaPredicted RBP34.99■■■■□ 3.19
CHKA-206ENST00000531341 ARHGEF12Q9NZN5 1544 aa34.99■■■■□ 3.19
CHKA-206ENST00000531341 C9orf84Q5VXU9 1444 aa34.98■■■■□ 3.19
CHKA-206ENST00000531341 MYO5CQ9NQX4 1742 aa34.96■■■■□ 3.19
CHKA-206ENST00000531341 AFAP1Q8N556 730 aa34.96■■■■□ 3.19
CHKA-206ENST00000531341 CDK11AQ9UQ88 783 aaPredicted RBP34.95■■■■□ 3.19
CHKA-206ENST00000531341 CERKQ8TCT0 537 aa34.93■■■■□ 3.18
CHKA-206ENST00000531341 TROQ12816 1431 aaPredicted RBP34.91■■■■□ 3.18
CHKA-206ENST00000531341 ARHGAP5Q13017 1502 aa34.88■■■■□ 3.17
CHKA-206ENST00000531341 ZNF518AQ6AHZ1 1483 aa34.88■■■■□ 3.17
CHKA-206ENST00000531341 LRRIQ1Q96JM4 1722 aa34.85■■■■□ 3.17
CHKA-206ENST00000531341 KDM5CP41229 1560 aa34.84■■■■□ 3.17
CHKA-206ENST00000531341 MYT1LQ9UL68 1186 aa34.82■■■■□ 3.16
CHKA-206ENST00000531341 CHIC1Q5VXU3 224 aa34.81■■■■□ 3.16
CHKA-206ENST00000531341 PREX1Q8TCU6 1659 aa34.8■■■■□ 3.16
CHKA-206ENST00000531341 CLIP1P30622 1438 aa34.8■■■■□ 3.16
CHKA-206ENST00000531341 DIP2CQ9Y2E4 1556 aa34.78■■■■□ 3.16
CHKA-206ENST00000531341 CDC42BPBQ9Y5S2 1711 aa34.75■■■■□ 3.15
CHKA-206ENST00000531341 TRAPPC8Q9Y2L5 1435 aa34.74■■■■□ 3.15
CHKA-206ENST00000531341 ABCA6Q8N139 1617 aa34.72■■■■□ 3.15
CHKA-206ENST00000531341 MLH3Q9UHC1 1453 aa34.71■■■■□ 3.15
CHKA-206ENST00000531341 STRCQ7RTU9 1775 aa34.71■■■■□ 3.15
CHKA-206ENST00000531341 UHRF1BP1Q6BDS2 1440 aa34.69■■■■□ 3.14
CHKA-206ENST00000531341 REREQ9P2R6 1566 aa34.69■■■■□ 3.14
CHKA-206ENST00000531341 ABCC1P33527 1531 aa34.65■■■■□ 3.14
CHKA-206ENST00000531341 PREX2Q70Z35 1606 aa34.64■■■■□ 3.14
CHKA-206ENST00000531341 CASKIN1Q8WXD9 1431 aa34.64■■■■□ 3.14
CHKA-206ENST00000531341 DMRT2Q9Y5R5 561 aa34.63■■■■□ 3.13
CHKA-206ENST00000531341 C3P01024 1663 aa34.61■■■■□ 3.13
CHKA-206ENST00000531341 AGLP35573 1532 aa34.6■■■■□ 3.13
CHKA-206ENST00000531341 ITSN2Q9NZM3 1697 aa34.59■■■■□ 3.13
CHKA-206ENST00000531341 CCDC18Q5T9S5 1454 aa34.58■■■■□ 3.13
CHKA-206ENST00000531341 SETD1BQ9UPS6 1966 aaKnown RBP34.57■■■■□ 3.12
CHKA-206ENST00000531341 KIDINS220Q9ULH0 1771 aa34.56■■■■□ 3.12
CHKA-206ENST00000531341 ESF1Q9H501 851 aaKnown RBP34.55■■■■□ 3.12
CHKA-206ENST00000531341 CDC42BPAQ5VT25 1732 aa34.52■■■■□ 3.12
CHKA-206ENST00000531341 ZNF777Q9ULD5 760 aaPredicted RBP34.52■■■■□ 3.12
CHKA-206ENST00000531341 PTPRTO14522 1441 aa34.5■■■■□ 3.11
CHKA-206ENST00000531341 SAMD9LQ8IVG5 1584 aa34.47■■■■□ 3.11
CHKA-206ENST00000531341 HNRNPMP52272 730 aaKnown RBP eCLIP34.46■■■■□ 3.111e-6■■■□□ 16.5
CHKA-206ENST00000531341 GPATCH8Q9UKJ3 1502 aaKnown RBP34.44■■■■□ 3.1
CHKA-206ENST00000531341 CNTLNQ9NXG0 1405 aa34.43■■■■□ 3.1
CHKA-206ENST00000531341 FYCO1Q9BQS8 1478 aa34.43■■■■□ 3.1
CHKA-206ENST00000531341 SYCP2Q9BX26 1530 aa34.41■■■■□ 3.1
CHKA-206ENST00000531341 SPAG9O60271 1321 aaKnown RBP34.4■■■■□ 3.1
CHKA-206ENST00000531341 ILDR2Q71H61 639 aa34.4■■■■□ 3.1
CHKA-206ENST00000531341 NCOA1Q15788 1441 aa34.39■■■■□ 3.1
CHKA-206ENST00000531341 LTBP4Q8N2S1 1624 aa34.39■■■■□ 3.1
CHKA-206ENST00000531341 ZMYM3Q14202 1370 aa34.37■■■■□ 3.09
CHKA-206ENST00000531341 DISP3Q9P2K9 1392 aa34.37■■■■□ 3.09
CHKA-206ENST00000531341 SUPT6HQ7KZ85 1726 aaKnown RBP34.33■■■■□ 3.09
CHKA-206ENST00000531341 NPATQ14207 1427 aa34.31■■■■□ 3.08
CHKA-206ENST00000531341 CAMSAP1Q5T5Y3 1602 aa34.31■■■■□ 3.08
CHKA-206ENST00000531341 CFDP1Q9UEE9 299 aaPredicted RBP34.31■■■■□ 3.08
CHKA-206ENST00000531341 NCKAP5LQ9HCH0 1330 aa34.3■■■■□ 3.08
CHKA-206ENST00000531341 MROH2AA6NES4 1674 aa34.29■■■■□ 3.08
CHKA-206ENST00000531341 ATP7AQ04656 1500 aa34.28■■■■□ 3.08
CHKA-206ENST00000531341 KIAA1107Q9UPP5 1409 aa34.28■■■■□ 3.08
CHKA-206ENST00000531341 A2MP01023 1474 aa34.25■■■■□ 3.07
CHKA-206ENST00000531341 CCNB3Q8WWL7 1395 aa34.24■■■■□ 3.07
CHKA-206ENST00000531341 PLXNC1O60486 1568 aa34.24■■■■□ 3.07
CHKA-206ENST00000531341 INO80Q9ULG1 1556 aaPredicted RBP34.24■■■■□ 3.07
CHKA-206ENST00000531341 GGT6Q6P531 493 aa34.24■■■■□ 3.07
CHKA-206ENST00000531341 CLTCQ00610 1675 aaKnown RBP34.23■■■■□ 3.07
CHKA-206ENST00000531341 ZNF644Q9H582 1327 aaPredicted RBP34.23■■■■□ 3.07
CHKA-206ENST00000531341 PLEKHH2Q8IVE3 1493 aa34.2■■■■□ 3.07
CHKA-206ENST00000531341 ZNF335Q9H4Z2 1342 aaPredicted RBP34.2■■■■□ 3.07
CHKA-206ENST00000531341 PTPRKQ15262 1439 aa34.2■■■■□ 3.06
CHKA-206ENST00000531341 IQSEC2Q5JU85 1478 aa34.18■■■■□ 3.06
CHKA-206ENST00000531341 MTUS2Q5JR59 1369 aa34.16■■■■□ 3.06
CHKA-206ENST00000531341 SOCS7O14512 581 aa34.14■■■■□ 3.06
CHKA-206ENST00000531341 MYO3AQ8NEV4 1616 aa34.14■■■■□ 3.06
CHKA-206ENST00000531341 SPATA31D1Q6ZQQ2 1576 aa34.11■■■■□ 3.05
CHKA-206ENST00000531341 MBD5Q9P267 1494 aa34.1■■■■□ 3.05
CHKA-206ENST00000531341 CEP170BQ9Y4F5 1589 aaPredicted RBP34.1■■■■□ 3.05
CHKA-206ENST00000531341 ZNF142P52746 1687 aaPredicted RBP34.09■■■■□ 3.05
CHKA-206ENST00000531341 PLA2R1Q13018 1463 aa34.09■■■■□ 3.05
CHKA-206ENST00000531341 PKD2Q13563 968 aa34.09■■■■□ 3.05
CHKA-206ENST00000531341 TIAM1Q13009 1591 aa34.09■■■■□ 3.05
CHKA-206ENST00000531341 TCOF1Q13428 1488 aaKnown RBP34.08■■■■□ 3.05
CHKA-206ENST00000531341 PPP6R1Q9UPN7 881 aa34.05■■■■□ 3.04
CHKA-206ENST00000531341 UBAP1LF5GYI3 381 aa34.04■■■■□ 3.04
CHKA-206ENST00000531341 ADGBQ8N7X0 1667 aa34.03■■■■□ 3.04
CHKA-206ENST00000531341 DHX29Q7Z478 1369 aaKnown RBP34■■■■□ 3.03
CHKA-206ENST00000531341 RTEL1-TNFRSF6BF6WH68 1400 aa33.99■■■■□ 3.03
CHKA-206ENST00000531341 FBXO31Q5XUX0 539 aaPredicted RBP33.99■■■■□ 3.03
CHKA-206ENST00000531341 EHBP1L1Q8N3D4 1523 aa33.98■■■■□ 3.03
CHKA-206ENST00000531341 CEP162Q5TB80 1403 aa33.96■■■■□ 3.03
CHKA-206ENST00000531341 A2ML1A8K2U0 1454 aa33.96■■■■□ 3.03
CHKA-206ENST00000531341 DNMT1P26358 1616 aaKnown RBP33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms