RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 HSCBQ8IWL3 235 aa19.77■□□□□ 0.76
PCDHA4-203ENST00000530339 RCAN3Q9UKA8 241 aa19.76■□□□□ 0.75
PCDHA4-203ENST00000530339 KTN1Q86UP2 1357 aaKnown RBP19.76■□□□□ 0.75
PCDHA4-203ENST00000530339 RALBP1Q15311 655 aa19.75■□□□□ 0.75
PCDHA4-203ENST00000530339 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
PCDHA4-203ENST00000530339 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
PCDHA4-203ENST00000530339 RAPGEF2Q9Y4G8 1499 aa19.72■□□□□ 0.75
PCDHA4-203ENST00000530339 ZRSR1Q15695 479 aaKnown RBP19.71■□□□□ 0.75
PCDHA4-203ENST00000530339 ROCK2O75116 1388 aaKnown RBP19.69■□□□□ 0.74
PCDHA4-203ENST00000530339 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
PCDHA4-203ENST00000530339 MSNP26038 577 aaKnown RBP19.67■□□□□ 0.74
PCDHA4-203ENST00000530339 PKD2Q13563 968 aa19.67■□□□□ 0.74
PCDHA4-203ENST00000530339 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
PCDHA4-203ENST00000530339 WIZO95785 1651 aa19.66■□□□□ 0.74
PCDHA4-203ENST00000530339 EIF3AQ14152 1382 aaKnown RBP19.66■□□□□ 0.74
PCDHA4-203ENST00000530339 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
PCDHA4-203ENST00000530339 LMOD2Q6P5Q4 547 aa19.66■□□□□ 0.74
PCDHA4-203ENST00000530339 PLCB2Q00722 1185 aa19.65■□□□□ 0.74
PCDHA4-203ENST00000530339 MORC1Q86VD1 984 aa19.64■□□□□ 0.74
PCDHA4-203ENST00000530339 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
PCDHA4-203ENST00000530339 TPRNQ4KMQ1 711 aa19.64■□□□□ 0.73
PCDHA4-203ENST00000530339 NPHP1O15259 732 aa19.63■□□□□ 0.73
PCDHA4-203ENST00000530339 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
PCDHA4-203ENST00000530339 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
PCDHA4-203ENST00000530339 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
PCDHA4-203ENST00000530339 SPRYD3Q8NCJ5 442 aa19.62■□□□□ 0.73
PCDHA4-203ENST00000530339 PTMSP20962 102 aa19.61■□□□□ 0.73
PCDHA4-203ENST00000530339 IPO8O15397 1037 aaKnown RBP19.61■□□□□ 0.73
PCDHA4-203ENST00000530339 FOXD1Q16676 465 aa19.61■□□□□ 0.73
PCDHA4-203ENST00000530339 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
PCDHA4-203ENST00000530339 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
PCDHA4-203ENST00000530339 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
PCDHA4-203ENST00000530339 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
PCDHA4-203ENST00000530339 SLKQ9H2G2 1235 aaPredicted RBP19.59■□□□□ 0.73
PCDHA4-203ENST00000530339 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
PCDHA4-203ENST00000530339 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
PCDHA4-203ENST00000530339 GBP4Q96PP9 640 aa19.59■□□□□ 0.73
PCDHA4-203ENST00000530339 NUP155O75694 1391 aa19.59■□□□□ 0.73
PCDHA4-203ENST00000530339 MCCP23508 829 aa19.58■□□□□ 0.72
PCDHA4-203ENST00000530339 CHAF1AQ13111 956 aaPredicted RBP19.57■□□□□ 0.72
PCDHA4-203ENST00000530339 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
PCDHA4-203ENST00000530339 GOLGA6L6A8MZA4 724 aa19.57■□□□□ 0.72
PCDHA4-203ENST00000530339 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
PCDHA4-203ENST00000530339 HDGFL2Q7Z4V5 671 aaPredicted RBP19.57■□□□□ 0.72
PCDHA4-203ENST00000530339 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
PCDHA4-203ENST00000530339 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
PCDHA4-203ENST00000530339 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
PCDHA4-203ENST00000530339 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.54■□□□□ 0.72
PCDHA4-203ENST00000530339 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
PCDHA4-203ENST00000530339 GZF1Q9H116 711 aaPredicted RBP19.53■□□□□ 0.72
PCDHA4-203ENST00000530339 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
PCDHA4-203ENST00000530339 NRDCO43847 1150 aa19.53■□□□□ 0.72
PCDHA4-203ENST00000530339 GOLGA6L3A6NEY3 463 aa19.52■□□□□ 0.72
PCDHA4-203ENST00000530339 OS9Q13438 667 aaPredicted RBP19.52■□□□□ 0.71
PCDHA4-203ENST00000530339 PMFBP1Q8TBY8 1022 aa19.5■□□□□ 0.71
PCDHA4-203ENST00000530339 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
PCDHA4-203ENST00000530339 GOLGA6L4A6NEF3 574 aa19.49■□□□□ 0.71
PCDHA4-203ENST00000530339 GOLGA2Q08379 1002 aa19.49■□□□□ 0.71
PCDHA4-203ENST00000530339 ZBED9Q6R2W3 1325 aa19.49■□□□□ 0.71
PCDHA4-203ENST00000530339 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
PCDHA4-203ENST00000530339 KCNJ4P48050 445 aa19.46■□□□□ 0.71
PCDHA4-203ENST00000530339 PRKRIP1Q9H875 184 aaPredicted RBP19.46■□□□□ 0.71
PCDHA4-203ENST00000530339 PDE4AP27815 886 aa19.46■□□□□ 0.71
PCDHA4-203ENST00000530339 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
PCDHA4-203ENST00000530339 KIF15Q9NS87 1388 aa19.45■□□□□ 0.7
PCDHA4-203ENST00000530339 MLECQ14165 292 aa19.45■□□□□ 0.7
PCDHA4-203ENST00000530339 FGD1P98174 961 aa19.45■□□□□ 0.7
PCDHA4-203ENST00000530339 KIAA2012Q0VF49 1180 aa19.42■□□□□ 0.7
PCDHA4-203ENST00000530339 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
PCDHA4-203ENST00000530339 ITPRIPQ8IWB1 547 aa19.41■□□□□ 0.7
PCDHA4-203ENST00000530339 GSE1Q14687 1217 aa19.41■□□□□ 0.7
PCDHA4-203ENST00000530339 MYBBP1AQ9BQG0 1328 aaKnown RBP19.4■□□□□ 0.7
PCDHA4-203ENST00000530339 MFAP1P55081 439 aaKnown RBP19.4■□□□□ 0.7
PCDHA4-203ENST00000530339 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
PCDHA4-203ENST00000530339 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
PCDHA4-203ENST00000530339 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.7
PCDHA4-203ENST00000530339 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.7
PCDHA4-203ENST00000530339 CENPQQ7L2Z9 268 aaPredicted RBP19.39■□□□□ 0.7
PCDHA4-203ENST00000530339 FAM161AQ3B820 660 aa19.38■□□□□ 0.69
PCDHA4-203ENST00000530339 RSPH6AQ9H0K4 717 aa19.38■□□□□ 0.69
PCDHA4-203ENST00000530339 RRP1P56182 461 aaKnown RBP19.38■□□□□ 0.69
PCDHA4-203ENST00000530339 GGT6Q6P531 493 aa19.37■□□□□ 0.69
PCDHA4-203ENST00000530339 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
PCDHA4-203ENST00000530339 DRC7Q8IY82 874 aa19.37■□□□□ 0.69
PCDHA4-203ENST00000530339 LMOD3Q0VAK6 560 aa19.37■□□□□ 0.69
PCDHA4-203ENST00000530339 SYAP1Q96A49 352 aaPredicted RBP19.37■□□□□ 0.69
PCDHA4-203ENST00000530339 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
PCDHA4-203ENST00000530339 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
PCDHA4-203ENST00000530339 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
PCDHA4-203ENST00000530339 CCDC144AA2RUR9 1427 aa19.33■□□□□ 0.69
PCDHA4-203ENST00000530339 KIAA1211Q6ZU35 1233 aa19.33■□□□□ 0.68
PCDHA4-203ENST00000530339 CUX1P39880 1505 aa19.33■□□□□ 0.68
PCDHA4-203ENST00000530339 SMC4Q9NTJ3 1288 aa19.32■□□□□ 0.68
PCDHA4-203ENST00000530339 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
PCDHA4-203ENST00000530339 HTATSF1O43719 755 aaKnown RBP19.31■□□□□ 0.68
PCDHA4-203ENST00000530339 HMMRO75330 724 aa19.31■□□□□ 0.68
PCDHA4-203ENST00000530339 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
PCDHA4-203ENST00000530339 DDX11L8A8MPP1 907 aa19.31■□□□□ 0.68
PCDHA4-203ENST00000530339 APBB1O00213 710 aa19.31■□□□□ 0.68
PCDHA4-203ENST00000530339 NAP1L2Q9ULW6 460 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms