RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
MACF1-230ENST00000530275 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
MACF1-230ENST00000530275 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
MACF1-230ENST00000530275 PTMSP20962 102 aa16.43■□□□□ 0.22
MACF1-230ENST00000530275 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
MACF1-230ENST00000530275 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
MACF1-230ENST00000530275 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
MACF1-230ENST00000530275 HDGFL2Q7Z4V5 671 aaPredicted RBP16.41■□□□□ 0.22
MACF1-230ENST00000530275 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
MACF1-230ENST00000530275 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
MACF1-230ENST00000530275 SAFB2Q14151 953 aaKnown RBP eCLIP16.4■□□□□ 0.228e-7■■■□□ 17.9
MACF1-230ENST00000530275 MLECQ14165 292 aa16.4■□□□□ 0.22
MACF1-230ENST00000530275 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
MACF1-230ENST00000530275 APBB1O00213 710 aa16.38■□□□□ 0.21
MACF1-230ENST00000530275 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
MACF1-230ENST00000530275 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
MACF1-230ENST00000530275 HTATSF1O43719 755 aaKnown RBP16.36■□□□□ 0.21
MACF1-230ENST00000530275 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
MACF1-230ENST00000530275 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
MACF1-230ENST00000530275 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
MACF1-230ENST00000530275 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
MACF1-230ENST00000530275 STK26Q9P289 416 aa16.34■□□□□ 0.21
MACF1-230ENST00000530275 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
MACF1-230ENST00000530275 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
MACF1-230ENST00000530275 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
MACF1-230ENST00000530275 TPM4P67936 248 aa16.32■□□□□ 0.2
MACF1-230ENST00000530275 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
MACF1-230ENST00000530275 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
MACF1-230ENST00000530275 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
MACF1-230ENST00000530275 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
MACF1-230ENST00000530275 CSB-PGBD3P0DP91 1061 aa16.31■□□□□ 0.2
MACF1-230ENST00000530275 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
MACF1-230ENST00000530275 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
MACF1-230ENST00000530275 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
MACF1-230ENST00000530275 EIF3AQ14152 1382 aaKnown RBP16.29■□□□□ 0.2
MACF1-230ENST00000530275 NACADO15069 1562 aa16.29■□□□□ 0.2
MACF1-230ENST00000530275 TMX4Q9H1E5 349 aaPredicted RBP16.29■□□□□ 0.2
MACF1-230ENST00000530275 U2AF1L5P0DN76 240 aaPredicted RBP16.29■□□□□ 0.2
MACF1-230ENST00000530275 U2AF1Q01081 240 aaKnown RBP eCLIP16.29■□□□□ 0.2
MACF1-230ENST00000530275 CARMIL1Q5VZK9 1371 aa16.28■□□□□ 0.2
MACF1-230ENST00000530275 RALBP1Q15311 655 aa16.28■□□□□ 0.2
MACF1-230ENST00000530275 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
MACF1-230ENST00000530275 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
MACF1-230ENST00000530275 PKD2Q13563 968 aa16.28■□□□□ 0.2
MACF1-230ENST00000530275 GGT6Q6P531 493 aa16.28■□□□□ 0.2
MACF1-230ENST00000530275 PMFBP1Q8TBY8 1022 aa16.28■□□□□ 0.2
MACF1-230ENST00000530275 CUX2O14529 1486 aa16.27■□□□□ 0.2
MACF1-230ENST00000530275 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.19
MACF1-230ENST00000530275 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
MACF1-230ENST00000530275 CHMP4AQ9BY43 222 aa16.26■□□□□ 0.19
MACF1-230ENST00000530275 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
MACF1-230ENST00000530275 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
MACF1-230ENST00000530275 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
MACF1-230ENST00000530275 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
MACF1-230ENST00000530275 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
MACF1-230ENST00000530275 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
MACF1-230ENST00000530275 CSPP1Q1MSJ5 1256 aa16.23■□□□□ 0.19
MACF1-230ENST00000530275 MFAP1P55081 439 aaKnown RBP16.23■□□□□ 0.19
MACF1-230ENST00000530275 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
MACF1-230ENST00000530275 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
MACF1-230ENST00000530275 SLKQ9H2G2 1235 aaPredicted RBP16.22■□□□□ 0.19
MACF1-230ENST00000530275 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
MACF1-230ENST00000530275 HMMRO75330 724 aa16.21■□□□□ 0.19
MACF1-230ENST00000530275 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.18
MACF1-230ENST00000530275 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.18
MACF1-230ENST00000530275 FOXD1Q16676 465 aa16.2■□□□□ 0.18
MACF1-230ENST00000530275 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
MACF1-230ENST00000530275 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
MACF1-230ENST00000530275 GOLGA6L3A6NEY3 463 aa16.19■□□□□ 0.18
MACF1-230ENST00000530275 RASSF8Q8NHQ8 419 aa16.18■□□□□ 0.18
MACF1-230ENST00000530275 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
MACF1-230ENST00000530275 GOLGA6L1Q8N7Z2 621 aa16.17■□□□□ 0.18
MACF1-230ENST00000530275 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
MACF1-230ENST00000530275 PRM3Q9NNZ6 103 aa16.16■□□□□ 0.18
MACF1-230ENST00000530275 ARID3AQ99856 593 aa16.16■□□□□ 0.18
MACF1-230ENST00000530275 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
MACF1-230ENST00000530275 NUP155O75694 1391 aa16.16■□□□□ 0.18
MACF1-230ENST00000530275 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
MACF1-230ENST00000530275 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
MACF1-230ENST00000530275 G3V3G9 751 aa16.15■□□□□ 0.18
MACF1-230ENST00000530275 DCAF8Q5TAQ9 597 aa16.15■□□□□ 0.18
MACF1-230ENST00000530275 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
MACF1-230ENST00000530275 SLC4A10Q6U841 1118 aa16.14■□□□□ 0.17
MACF1-230ENST00000530275 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
MACF1-230ENST00000530275 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
MACF1-230ENST00000530275 SOGA1O94964 1423 aa16.13■□□□□ 0.17
MACF1-230ENST00000530275 PHF14O94880 888 aa16.13■□□□□ 0.17
MACF1-230ENST00000530275 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
MACF1-230ENST00000530275 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
MACF1-230ENST00000530275 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
MACF1-230ENST00000530275 PDE4CQ08493 712 aa16.11■□□□□ 0.17
MACF1-230ENST00000530275 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
MACF1-230ENST00000530275 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
MACF1-230ENST00000530275 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
MACF1-230ENST00000530275 RAB3GAP2Q9H2M9 1393 aa16.1■□□□□ 0.17
MACF1-230ENST00000530275 ST18O60284 1047 aa16.1■□□□□ 0.17
MACF1-230ENST00000530275 TNNT3P45378 269 aaPredicted RBP16.1■□□□□ 0.17
MACF1-230ENST00000530275 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
MACF1-230ENST00000530275 TPM3P06753 285 aa16.09■□□□□ 0.17
MACF1-230ENST00000530275 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms