RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ZSWIM6Q9HCJ5 1215 aa18.34■□□□□ 0.53
CCDC90B-217ENST00000530253 PKD2Q13563 968 aa18.32■□□□□ 0.52
CCDC90B-217ENST00000530253 SPNS2Q8IVW8 549 aa18.32■□□□□ 0.52
CCDC90B-217ENST00000530253 TMEM92Q6UXU6 159 aa18.31■□□□□ 0.52
CCDC90B-217ENST00000530253 MFRPQ9BY79 579 aa18.28■□□□□ 0.52
CCDC90B-217ENST00000530253 RGL2O15211 777 aa18.27■□□□□ 0.52
CCDC90B-217ENST00000530253 ERBB3P21860 1342 aa18.26■□□□□ 0.51
CCDC90B-217ENST00000530253 MMRN1Q13201 1228 aa18.26■□□□□ 0.51
CCDC90B-217ENST00000530253 POTEB3A0JP26 581 aa18.24■□□□□ 0.51
CCDC90B-217ENST00000530253 POTEBQ6S5H4 581 aa18.24■□□□□ 0.51
CCDC90B-217ENST00000530253 KRTAP3-3Q9BYR6 98 aa18.2■□□□□ 0.5
CCDC90B-217ENST00000530253 KRTAP3-2Q9BYR7 98 aa18.2■□□□□ 0.5
CCDC90B-217ENST00000530253 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
CCDC90B-217ENST00000530253 VARS2Q5ST30 1063 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-217ENST00000530253 ABCC9O60706 1549 aa18.08■□□□□ 0.48
CCDC90B-217ENST00000530253 KIF3CO14782 793 aa18.05■□□□□ 0.48
CCDC90B-217ENST00000530253 C2orf72A6NCS6 295 aa18.03■□□□□ 0.48
CCDC90B-217ENST00000530253 ARSIQ5FYB1 569 aa18.03■□□□□ 0.48
CCDC90B-217ENST00000530253 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
CCDC90B-217ENST00000530253 ZNF687Q8N1G0 1237 aa18.02■□□□□ 0.48
CCDC90B-217ENST00000530253 HS6ST3Q8IZP7 471 aa18■□□□□ 0.47
CCDC90B-217ENST00000530253 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-217ENST00000530253 SLC34A2O95436 690 aa17.94■□□□□ 0.46
CCDC90B-217ENST00000530253 PPP1R37O75864 691 aa17.89■□□□□ 0.45
CCDC90B-217ENST00000530253 PTGER2P43116 358 aa17.87■□□□□ 0.45
CCDC90B-217ENST00000530253 KHSRPQ92945 711 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC90B-217ENST00000530253 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
CCDC90B-217ENST00000530253 RYDENQ9NUL5 291 aaKnown RBP17.85■□□□□ 0.45
CCDC90B-217ENST00000530253 PCDHGA4Q9Y5G9 962 aa17.84■□□□□ 0.45
CCDC90B-217ENST00000530253 NUDT7P0C024 238 aa17.83■□□□□ 0.44
CCDC90B-217ENST00000530253 RNF166Q96A37 237 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-217ENST00000530253 PBX2P40425 430 aa17.79■□□□□ 0.44
CCDC90B-217ENST00000530253 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
CCDC90B-217ENST00000530253 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
CCDC90B-217ENST00000530253 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-217ENST00000530253 FOXK1P85037 733 aa17.75■□□□□ 0.43
CCDC90B-217ENST00000530253 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-217ENST00000530253 LHX6Q9UPM6 363 aa17.74■□□□□ 0.43
CCDC90B-217ENST00000530253 LSM11P83369 360 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC90B-217ENST00000530253 ANKRD13DQ6ZTN6 518 aa17.72■□□□□ 0.43
CCDC90B-217ENST00000530253 PTCD2Q8WV60 388 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-217ENST00000530253 PLPP6Q8IY26 295 aa17.68■□□□□ 0.42
CCDC90B-217ENST00000530253 TBC1D12O60347 775 aa17.67■□□□□ 0.42
CCDC90B-217ENST00000530253 NKX1-1Q15270 411 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-217ENST00000530253 DSG2Q14126 1118 aa17.61■□□□□ 0.41
CCDC90B-217ENST00000530253 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
CCDC90B-217ENST00000530253 ARHGAP33O14559 1287 aa17.55■□□□□ 0.4
CCDC90B-217ENST00000530253 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
CCDC90B-217ENST00000530253 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
CCDC90B-217ENST00000530253 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
CCDC90B-217ENST00000530253 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
CCDC90B-217ENST00000530253 CRISPLD2Q9H0B8 497 aa17.51■□□□□ 0.39
CCDC90B-217ENST00000530253 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
CCDC90B-217ENST00000530253 PDE4AP27815 886 aa17.46■□□□□ 0.39
CCDC90B-217ENST00000530253 PPP1R15BQ5SWA1 713 aa17.46■□□□□ 0.39
CCDC90B-217ENST00000530253 ADGRD1Q6QNK2 874 aa17.45■□□□□ 0.38
CCDC90B-217ENST00000530253 OXER1Q8TDS5 423 aa17.45■□□□□ 0.38
CCDC90B-217ENST00000530253 TK2O00142 265 aa17.44■□□□□ 0.38
CCDC90B-217ENST00000530253 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
CCDC90B-217ENST00000530253 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCDC90B-217ENST00000530253 GTPBP6O43824 516 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-217ENST00000530253 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
CCDC90B-217ENST00000530253 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
CCDC90B-217ENST00000530253 NACADO15069 1562 aa17.36■□□□□ 0.37
CCDC90B-217ENST00000530253 NCKAP5LQ9HCH0 1330 aa17.36■□□□□ 0.37
CCDC90B-217ENST00000530253 PSEN2P49810 448 aa17.34■□□□□ 0.37
CCDC90B-217ENST00000530253 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.36
CCDC90B-217ENST00000530253 HCSTQ9UBK5 93 aa17.33■□□□□ 0.36
CCDC90B-217ENST00000530253 DMRTA1Q5VZB9 504 aa17.32■□□□□ 0.36
CCDC90B-217ENST00000530253 STAC3Q96MF2 364 aa17.32■□□□□ 0.36
CCDC90B-217ENST00000530253 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
CCDC90B-217ENST00000530253 KCNK17Q96T54 332 aa17.31■□□□□ 0.36
CCDC90B-217ENST00000530253 ZNF454Q8N9F8 522 aa17.3■□□□□ 0.36
CCDC90B-217ENST00000530253 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-217ENST00000530253 HRO43593 1189 aa17.28■□□□□ 0.36
CCDC90B-217ENST00000530253 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
CCDC90B-217ENST00000530253 MFSD10Q14728 455 aa17.25■□□□□ 0.35
CCDC90B-217ENST00000530253 FOSBP53539 338 aa17.23■□□□□ 0.35
CCDC90B-217ENST00000530253 JPH4Q96JJ6 628 aa17.22■□□□□ 0.35
CCDC90B-217ENST00000530253 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-217ENST00000530253 EVI5O60447 810 aa17.21■□□□□ 0.35
CCDC90B-217ENST00000530253 PTPREP23469 700 aa17.21■□□□□ 0.35
CCDC90B-217ENST00000530253 MAP3K9P80192 1104 aa17.2■□□□□ 0.34
CCDC90B-217ENST00000530253 SLC4A5Q9BY07 1137 aa17.19■□□□□ 0.34
CCDC90B-217ENST00000530253 VPS9D1Q9Y2B5 631 aa17.17■□□□□ 0.34
CCDC90B-217ENST00000530253 ZDHHC16Q969W1 377 aa17.14■□□□□ 0.33
CCDC90B-217ENST00000530253 PLA2G2EQ9NZK7 142 aa17.14■□□□□ 0.33
CCDC90B-217ENST00000530253 KCTD12Q96CX2 325 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-217ENST00000530253 ZBED2Q9BTP6 218 aa17.06■□□□□ 0.32
CCDC90B-217ENST00000530253 EMILIN3Q9NT22 766 aa17.06■□□□□ 0.32
CCDC90B-217ENST00000530253 ADAM33Q9BZ11 813 aa17.04■□□□□ 0.32
CCDC90B-217ENST00000530253 GOLGA8CPA6NN73 597 aa17.03■□□□□ 0.32
CCDC90B-217ENST00000530253 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
CCDC90B-217ENST00000530253 NBPF3Q9H094 633 aa17.03■□□□□ 0.32
CCDC90B-217ENST00000530253 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-217ENST00000530253 FBXW7Q969H0 707 aa17.02■□□□□ 0.32
CCDC90B-217ENST00000530253 MRPL50Q8N5N7 158 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-217ENST00000530253 BHMG1C9JSJ3 638 aaPredicted RBP17■□□□□ 0.31
CCDC90B-217ENST00000530253 PPP1R3GB7ZBB8 358 aa16.99■□□□□ 0.31
CCDC90B-217ENST00000530253 PHF14O94880 888 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms