RNA–Protein interactions for RNA: ENST00000529774.1

RDX-207, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-207ENST00000529774 KRTAP3-2Q9BYR7 98 aa13.58□□□□□ -0.24
RDX-207ENST00000529774 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
RDX-207ENST00000529774 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
RDX-207ENST00000529774 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
RDX-207ENST00000529774 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
RDX-207ENST00000529774 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
RDX-207ENST00000529774 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
RDX-207ENST00000529774 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
RDX-207ENST00000529774 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
RDX-207ENST00000529774 ERBB3P21860 1342 aa13.49□□□□□ -0.25
RDX-207ENST00000529774 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
RDX-207ENST00000529774 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
RDX-207ENST00000529774 SOX12O15370 315 aa13.4□□□□□ -0.26
RDX-207ENST00000529774 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
RDX-207ENST00000529774 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
RDX-207ENST00000529774 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
RDX-207ENST00000529774 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
RDX-207ENST00000529774 VGFO15240 615 aaPredicted RBP13.34□□□□□ -0.27
RDX-207ENST00000529774 HS6ST3Q8IZP7 471 aa13.33□□□□□ -0.28
RDX-207ENST00000529774 RNF166Q96A37 237 aaPredicted RBP13.33□□□□□ -0.28
RDX-207ENST00000529774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
RDX-207ENST00000529774 NBR1Q14596 966 aa13.32□□□□□ -0.28
RDX-207ENST00000529774 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
RDX-207ENST00000529774 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
RDX-207ENST00000529774 ZNF687Q8N1G0 1237 aa13.28□□□□□ -0.28
RDX-207ENST00000529774 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
RDX-207ENST00000529774 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
RDX-207ENST00000529774 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
RDX-207ENST00000529774 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.29
RDX-207ENST00000529774 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
RDX-207ENST00000529774 PTGER2P43116 358 aa13.24□□□□□ -0.29
RDX-207ENST00000529774 NLRP6P59044 892 aa13.23□□□□□ -0.29
RDX-207ENST00000529774 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
RDX-207ENST00000529774 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
RDX-207ENST00000529774 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
RDX-207ENST00000529774 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
RDX-207ENST00000529774 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
RDX-207ENST00000529774 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
RDX-207ENST00000529774 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
RDX-207ENST00000529774 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
RDX-207ENST00000529774 KHSRPQ92945 711 aaKnown RBP eCLIP13.08□□□□□ -0.328e-6■■■□□ 18.5
RDX-207ENST00000529774 STK25O00506 426 aa13.05□□□□□ -0.32
RDX-207ENST00000529774 LSM11P83369 360 aaKnown RBP eCLIP13.05□□□□□ -0.32
RDX-207ENST00000529774 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
RDX-207ENST00000529774 PBX2P40425 430 aa13.03□□□□□ -0.32
RDX-207ENST00000529774 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
RDX-207ENST00000529774 KIF3CO14782 793 aa13.01□□□□□ -0.33
RDX-207ENST00000529774 NUDT7P0C024 238 aa13.01□□□□□ -0.33
RDX-207ENST00000529774 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
RDX-207ENST00000529774 SLC34A2O95436 690 aa12.96□□□□□ -0.33
RDX-207ENST00000529774 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
RDX-207ENST00000529774 TIMELESSQ9UNS1 1208 aa12.95□□□□□ -0.34
RDX-207ENST00000529774 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
RDX-207ENST00000529774 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
RDX-207ENST00000529774 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
RDX-207ENST00000529774 ERICH6Q7L0X2 663 aa12.93□□□□□ -0.34
RDX-207ENST00000529774 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
RDX-207ENST00000529774 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
RDX-207ENST00000529774 AXIN2Q9Y2T1 843 aa12.89□□□□□ -0.35
RDX-207ENST00000529774 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
RDX-207ENST00000529774 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
RDX-207ENST00000529774 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
RDX-207ENST00000529774 ARHGAP33O14559 1287 aa12.84□□□□□ -0.35
RDX-207ENST00000529774 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
RDX-207ENST00000529774 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
RDX-207ENST00000529774 ADGRD1Q6QNK2 874 aa12.82□□□□□ -0.36
RDX-207ENST00000529774 TK2O00142 265 aa12.76□□□□□ -0.37
RDX-207ENST00000529774 PTCD2Q8WV60 388 aaKnown RBP12.76□□□□□ -0.37
RDX-207ENST00000529774 PPP1R37O75864 691 aa12.75□□□□□ -0.37
RDX-207ENST00000529774 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
RDX-207ENST00000529774 TBC1D12O60347 775 aa12.73□□□□□ -0.37
RDX-207ENST00000529774 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
RDX-207ENST00000529774 FOXK1P85037 733 aa12.72□□□□□ -0.37
RDX-207ENST00000529774 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
RDX-207ENST00000529774 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
RDX-207ENST00000529774 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
RDX-207ENST00000529774 ARXQ96QS3 562 aa12.7□□□□□ -0.38
RDX-207ENST00000529774 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
RDX-207ENST00000529774 PSEN2P49810 448 aa12.68□□□□□ -0.38
RDX-207ENST00000529774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.68□□□□□ -0.38
RDX-207ENST00000529774 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
RDX-207ENST00000529774 HRO43593 1189 aa12.67□□□□□ -0.38
RDX-207ENST00000529774 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
RDX-207ENST00000529774 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
RDX-207ENST00000529774 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
RDX-207ENST00000529774 KCTD12Q96CX2 325 aaKnown RBP12.64□□□□□ -0.39
RDX-207ENST00000529774 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
RDX-207ENST00000529774 DSG2Q14126 1118 aa12.62□□□□□ -0.39
RDX-207ENST00000529774 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
RDX-207ENST00000529774 C14orf37Q86TY3 774 aa12.57□□□□□ -0.4
RDX-207ENST00000529774 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
RDX-207ENST00000529774 ZNF454Q8N9F8 522 aa12.52□□□□□ -0.41
RDX-207ENST00000529774 VPS9D1Q9Y2B5 631 aa12.52□□□□□ -0.41
RDX-207ENST00000529774 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
RDX-207ENST00000529774 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
RDX-207ENST00000529774 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
RDX-207ENST00000529774 PTPN5P54829 565 aa12.5□□□□□ -0.41
RDX-207ENST00000529774 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
RDX-207ENST00000529774 SLC4A5Q9BY07 1137 aa12.48□□□□□ -0.41
RDX-207ENST00000529774 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms