RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
PCDHA6-202ENST00000527624 DNMT1P26358 1616 aaKnown RBP25.09■■□□□ 1.61
PCDHA6-202ENST00000527624 CLASP1Q7Z460 1538 aa25.09■■□□□ 1.61
PCDHA6-202ENST00000527624 KDM6BO15054 1643 aa25.07■■□□□ 1.6
PCDHA6-202ENST00000527624 ABCC10Q5T3U5 1492 aa25.05■■□□□ 1.6
PCDHA6-202ENST00000527624 TRIM52Q96A61 297 aa25.04■■□□□ 1.6
PCDHA6-202ENST00000527624 ROCK1Q13464 1354 aa25.03■■□□□ 1.6
PCDHA6-202ENST00000527624 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
PCDHA6-202ENST00000527624 CDC42BPAQ5VT25 1732 aa24.99■■□□□ 1.59
PCDHA6-202ENST00000527624 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
PCDHA6-202ENST00000527624 TIMELESSQ9UNS1 1208 aa24.95■■□□□ 1.58
PCDHA6-202ENST00000527624 ACIN1Q9UKV3 1341 aaKnown RBP24.95■■□□□ 1.58
PCDHA6-202ENST00000527624 DENND4BO75064 1496 aaPredicted RBP24.93■■□□□ 1.58
PCDHA6-202ENST00000527624 MPHOSPH9Q99550 1183 aa24.91■■□□□ 1.58
PCDHA6-202ENST00000527624 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
PCDHA6-202ENST00000527624 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
PCDHA6-202ENST00000527624 CROCC2H7BZ55 1655 aa24.88■■□□□ 1.57
PCDHA6-202ENST00000527624 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
PCDHA6-202ENST00000527624 CENPBP07199 599 aaPredicted RBP24.87■■□□□ 1.57
PCDHA6-202ENST00000527624 ADGBQ8N7X0 1667 aa24.86■■□□□ 1.57
PCDHA6-202ENST00000527624 ADGRL2O95490 1459 aa24.86■■□□□ 1.57
PCDHA6-202ENST00000527624 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.57
PCDHA6-202ENST00000527624 FOXD1Q16676 465 aa24.85■■□□□ 1.57
PCDHA6-202ENST00000527624 KCNH8Q96L42 1107 aa24.85■■□□□ 1.57
PCDHA6-202ENST00000527624 ANKRD30AQ9BXX3 1397 aa24.85■■□□□ 1.57
PCDHA6-202ENST00000527624 TTC37Q6PGP7 1564 aa24.84■■□□□ 1.57
PCDHA6-202ENST00000527624 MIER1Q8N108 512 aa24.84■■□□□ 1.57
PCDHA6-202ENST00000527624 UHRF1BP1LA0JNW5 1464 aa24.83■■□□□ 1.56
PCDHA6-202ENST00000527624 PREX2Q70Z35 1606 aa24.82■■□□□ 1.56
PCDHA6-202ENST00000527624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.82■■□□□ 1.56
PCDHA6-202ENST00000527624 C9orf84Q5VXU9 1444 aa24.82■■□□□ 1.56
PCDHA6-202ENST00000527624 ZCCHC11Q5TAX3 1644 aaKnown RBP24.81■■□□□ 1.56
PCDHA6-202ENST00000527624 CDC42BPBQ9Y5S2 1711 aa24.81■■□□□ 1.56
PCDHA6-202ENST00000527624 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
PCDHA6-202ENST00000527624 SHANK2Q9UPX8 1470 aa24.8■■□□□ 1.56
PCDHA6-202ENST00000527624 TSPY4P0CV99 314 aa24.79■■□□□ 1.56
PCDHA6-202ENST00000527624 TSPY10P0CW01 314 aa24.79■■□□□ 1.56
PCDHA6-202ENST00000527624 KDM5BQ9UGL1 1544 aa24.79■■□□□ 1.56
PCDHA6-202ENST00000527624 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
PCDHA6-202ENST00000527624 MBD5Q9P267 1494 aa24.78■■□□□ 1.56
PCDHA6-202ENST00000527624 ARHGAP5Q13017 1502 aa24.77■■□□□ 1.56
PCDHA6-202ENST00000527624 ANKRD50Q9ULJ7 1429 aa24.75■■□□□ 1.55
PCDHA6-202ENST00000527624 ARHGEF5Q12774 1597 aa24.75■■□□□ 1.55
PCDHA6-202ENST00000527624 PZPP20742 1482 aa24.73■■□□□ 1.55
PCDHA6-202ENST00000527624 CCDC141Q6ZP82 1450 aa24.73■■□□□ 1.55
PCDHA6-202ENST00000527624 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
PCDHA6-202ENST00000527624 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
PCDHA6-202ENST00000527624 ANKRD30BQ9BXX2 1392 aa24.71■■□□□ 1.55
PCDHA6-202ENST00000527624 KIF15Q9NS87 1388 aa24.7■■□□□ 1.54
PCDHA6-202ENST00000527624 MYO5CQ9NQX4 1742 aa24.69■■□□□ 1.54
PCDHA6-202ENST00000527624 HIRIP3Q9BW71 556 aaPredicted RBP24.69■■□□□ 1.54
PCDHA6-202ENST00000527624 RSPH4AQ5TD94 716 aa24.66■■□□□ 1.54
PCDHA6-202ENST00000527624 PLCH2O75038 1416 aa24.65■■□□□ 1.54
PCDHA6-202ENST00000527624 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
PCDHA6-202ENST00000527624 NUP155O75694 1391 aa24.62■■□□□ 1.53
PCDHA6-202ENST00000527624 RPRD2Q5VT52 1461 aaKnown RBP24.62■■□□□ 1.53
PCDHA6-202ENST00000527624 PKD2Q13563 968 aa24.62■■□□□ 1.53
PCDHA6-202ENST00000527624 PLEKHH2Q8IVE3 1493 aa24.61■■□□□ 1.53
PCDHA6-202ENST00000527624 KIAA1107Q9UPP5 1409 aa24.61■■□□□ 1.53
PCDHA6-202ENST00000527624 EFCAB2Q5VUJ9 269 aa24.6■■□□□ 1.53
PCDHA6-202ENST00000527624 GTF3C3Q9Y5Q9 886 aa24.6■■□□□ 1.53
PCDHA6-202ENST00000527624 ARHGEF12Q9NZN5 1544 aa24.6■■□□□ 1.53
PCDHA6-202ENST00000527624 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
PCDHA6-202ENST00000527624 WDR7Q9Y4E6 1490 aa24.59■■□□□ 1.53
PCDHA6-202ENST00000527624 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
PCDHA6-202ENST00000527624 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
PCDHA6-202ENST00000527624 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
PCDHA6-202ENST00000527624 KDM5DQ9BY66 1539 aa24.52■■□□□ 1.52
PCDHA6-202ENST00000527624 ABCC1P33527 1531 aa24.51■■□□□ 1.51
PCDHA6-202ENST00000527624 ASXL2Q76L83 1435 aa24.5■■□□□ 1.51
PCDHA6-202ENST00000527624 TRAPPC8Q9Y2L5 1435 aa24.5■■□□□ 1.51
PCDHA6-202ENST00000527624 PLXNC1O60486 1568 aa24.47■■□□□ 1.51
PCDHA6-202ENST00000527624 NBPF8Q3BBV2 869 aa24.46■■□□□ 1.51
PCDHA6-202ENST00000527624 ARAP3Q8WWN8 1544 aa24.45■■□□□ 1.51
PCDHA6-202ENST00000527624 NPM1P06748 294 aaKnown RBP eCLIP24.44■■□□□ 1.5
PCDHA6-202ENST00000527624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.5
PCDHA6-202ENST00000527624 AFAP1Q8N556 730 aa24.43■■□□□ 1.5
PCDHA6-202ENST00000527624 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
PCDHA6-202ENST00000527624 HSPA5P11021 654 aaKnown RBP24.43■■□□□ 1.5
PCDHA6-202ENST00000527624 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
PCDHA6-202ENST00000527624 FANCAO15360 1455 aa24.42■■□□□ 1.5
PCDHA6-202ENST00000527624 DUOX2Q9NRD8 1548 aa24.41■■□□□ 1.5
PCDHA6-202ENST00000527624 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
PCDHA6-202ENST00000527624 EIF4G2P78344 907 aaKnown RBP eCLIP24.39■■□□□ 1.49
PCDHA6-202ENST00000527624 UNC13BO14795 1591 aa24.38■■□□□ 1.49
PCDHA6-202ENST00000527624 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
PCDHA6-202ENST00000527624 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
PCDHA6-202ENST00000527624 ZFYVE16Q7Z3T8 1539 aa24.33■■□□□ 1.49
PCDHA6-202ENST00000527624 ADGRL1O94910 1474 aa24.33■■□□□ 1.49
PCDHA6-202ENST00000527624 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
PCDHA6-202ENST00000527624 RTEL1-TNFRSF6BF6WH68 1400 aa24.31■■□□□ 1.48
PCDHA6-202ENST00000527624 IQGAP3Q86VI3 1631 aa24.29■■□□□ 1.48
PCDHA6-202ENST00000527624 PELP1Q8IZL8 1130 aaKnown RBP24.29■■□□□ 1.48
PCDHA6-202ENST00000527624 MYT1LQ9UL68 1186 aa24.29■■□□□ 1.48
PCDHA6-202ENST00000527624 WASHC2AQ641Q2 1341 aa24.28■■□□□ 1.48
PCDHA6-202ENST00000527624 MAGI2Q86UL8 1455 aa24.28■■□□□ 1.48
PCDHA6-202ENST00000527624 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
PCDHA6-202ENST00000527624 ATP7AQ04656 1500 aa24.25■■□□□ 1.47
PCDHA6-202ENST00000527624 PLA2R1Q13018 1463 aa24.25■■□□□ 1.47
PCDHA6-202ENST00000527624 KDM2AQ9Y2K7 1162 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms