RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 PLCH2O75038 1416 aa34.42■■■■□ 3.1
PKP3-205ENST00000527442 HSPA2P54652 639 aa34.42■■■■□ 3.1
PKP3-205ENST00000527442 SCAPERQ9BY12 1400 aa34.41■■■■□ 3.1
PKP3-205ENST00000527442 MLECQ14165 292 aa34.36■■■■□ 3.09
PKP3-205ENST00000527442 KIF14Q15058 1648 aa34.34■■■■□ 3.09
PKP3-205ENST00000527442 ARHGEF12Q9NZN5 1544 aa34.32■■■■□ 3.08
PKP3-205ENST00000527442 ATP10AO60312 1499 aa34.3■■■■□ 3.08
PKP3-205ENST00000527442 FMN1Q68DA7 1419 aa34.3■■■■□ 3.08
PKP3-205ENST00000527442 ARHGAP35Q9NRY4 1499 aa34.29■■■■□ 3.08
PKP3-205ENST00000527442 C9orf84Q5VXU9 1444 aa34.28■■■■□ 3.08
PKP3-205ENST00000527442 LRRIQ1Q96JM4 1722 aa34.27■■■■□ 3.08
PKP3-205ENST00000527442 PREX1Q8TCU6 1659 aa34.26■■■■□ 3.08
PKP3-205ENST00000527442 EHMT2Q96KQ7 1210 aa34.26■■■■□ 3.08
PKP3-205ENST00000527442 ATP1B4Q9UN42 357 aaPredicted RBP34.26■■■■□ 3.08
PKP3-205ENST00000527442 EFCAB2Q5VUJ9 269 aa34.23■■■■□ 3.07
PKP3-205ENST00000527442 KDM5CP41229 1560 aa34.21■■■■□ 3.07
PKP3-205ENST00000527442 UBTFP17480 764 aaKnown RBP34.2■■■■□ 3.07
PKP3-205ENST00000527442 ZNF518AQ6AHZ1 1483 aa34.2■■■■□ 3.06
PKP3-205ENST00000527442 ARHGAP5Q13017 1502 aa34.2■■■■□ 3.06
PKP3-205ENST00000527442 TROQ12816 1431 aaPredicted RBP34.19■■■■□ 3.06
PKP3-205ENST00000527442 CDK11AQ9UQ88 783 aaPredicted RBP34.16■■■■□ 3.06
PKP3-205ENST00000527442 DIP2CQ9Y2E4 1556 aa34.15■■■■□ 3.06
PKP3-205ENST00000527442 CDC42BPBQ9Y5S2 1711 aa34.14■■■■□ 3.06
PKP3-205ENST00000527442 CERKQ8TCT0 537 aa34.13■■■■□ 3.05
PKP3-205ENST00000527442 CEBPAP49715 358 aaPredicted RBP34.11■■■■□ 3.05
PKP3-205ENST00000527442 CLIP1P30622 1438 aa34.11■■■■□ 3.05
PKP3-205ENST00000527442 ABCA6Q8N139 1617 aa34.11■■■■□ 3.05
PKP3-205ENST00000527442 STRCQ7RTU9 1775 aa34.1■■■■□ 3.05
PKP3-205ENST00000527442 AFAP1Q8N556 730 aa34.09■■■■□ 3.05
PKP3-205ENST00000527442 REREQ9P2R6 1566 aa34.08■■■■□ 3.05
PKP3-205ENST00000527442 PREX2Q70Z35 1606 aa34.07■■■■□ 3.04
PKP3-205ENST00000527442 C3P01024 1663 aa34.03■■■■□ 3.04
PKP3-205ENST00000527442 ITSN2Q9NZM3 1697 aa34.03■■■■□ 3.04
PKP3-205ENST00000527442 ABCC1P33527 1531 aa34.02■■■■□ 3.04
PKP3-205ENST00000527442 MLH3Q9UHC1 1453 aa34■■■■□ 3.03
PKP3-205ENST00000527442 UHRF1BP1Q6BDS2 1440 aa33.99■■■■□ 3.03
PKP3-205ENST00000527442 MYT1LQ9UL68 1186 aa33.99■■■■□ 3.03
PKP3-205ENST00000527442 SETD1BQ9UPS6 1966 aaKnown RBP33.99■■■■□ 3.03
PKP3-205ENST00000527442 TRAPPC8Q9Y2L5 1435 aa33.96■■■■□ 3.03
PKP3-205ENST00000527442 CDC42BPAQ5VT25 1732 aa33.95■■■■□ 3.03
PKP3-205ENST00000527442 AGLP35573 1532 aa33.94■■■■□ 3.02
PKP3-205ENST00000527442 KIDINS220Q9ULH0 1771 aa33.93■■■■□ 3.02
PKP3-205ENST00000527442 CCDC18Q5T9S5 1454 aa33.93■■■■□ 3.02
PKP3-205ENST00000527442 CASKIN1Q8WXD9 1431 aa33.9■■■■□ 3.02
PKP3-205ENST00000527442 DMRT2Q9Y5R5 561 aa33.86■■■■□ 3.01
PKP3-205ENST00000527442 SAMD9LQ8IVG5 1584 aa33.8■■■■□ 3
PKP3-205ENST00000527442 PTPRTO14522 1441 aa33.79■■■■□ 3
PKP3-205ENST00000527442 FYCO1Q9BQS8 1478 aa33.77■■■■□ 3
PKP3-205ENST00000527442 ESF1Q9H501 851 aaKnown RBP33.77■■■■□ 3
PKP3-205ENST00000527442 MROH2AA6NES4 1674 aa33.76■■■□□ 2.99
PKP3-205ENST00000527442 SYCP2Q9BX26 1530 aa33.75■■■□□ 2.99
PKP3-205ENST00000527442 CNTLNQ9NXG0 1405 aa33.75■■■□□ 2.99
PKP3-205ENST00000527442 SUPT6HQ7KZ85 1726 aaKnown RBP33.72■■■□□ 2.99
PKP3-205ENST00000527442 LTBP4Q8N2S1 1624 aa33.71■■■□□ 2.99
PKP3-205ENST00000527442 NCOA1Q15788 1441 aa33.7■■■□□ 2.99
PKP3-205ENST00000527442 GPATCH8Q9UKJ3 1502 aaKnown RBP33.68■■■□□ 2.98
PKP3-205ENST00000527442 ZNF777Q9ULD5 760 aaPredicted RBP33.67■■■□□ 2.98
PKP3-205ENST00000527442 INO80Q9ULG1 1556 aaPredicted RBP33.65■■■□□ 2.98
PKP3-205ENST00000527442 ATP7AQ04656 1500 aa33.65■■■□□ 2.98
PKP3-205ENST00000527442 DISP3Q9P2K9 1392 aa33.65■■■□□ 2.98
PKP3-205ENST00000527442 CLTCQ00610 1675 aaKnown RBP33.64■■■□□ 2.98
PKP3-205ENST00000527442 CAMSAP1Q5T5Y3 1602 aa33.64■■■□□ 2.98
PKP3-205ENST00000527442 NPATQ14207 1427 aa33.64■■■□□ 2.98
PKP3-205ENST00000527442 PLXNC1O60486 1568 aa33.63■■■□□ 2.97
PKP3-205ENST00000527442 LOC105371045A0A1W2PR82 267 aa33.62■■■□□ 2.97
PKP3-205ENST00000527442 SPAG9O60271 1321 aaKnown RBP33.61■■■□□ 2.97
PKP3-205ENST00000527442 HNRNPMP52272 730 aaKnown RBP eCLIP33.59■■■□□ 2.97
PKP3-205ENST00000527442 ZNF142P52746 1687 aaPredicted RBP33.58■■■□□ 2.97
PKP3-205ENST00000527442 MYO3AQ8NEV4 1616 aa33.58■■■□□ 2.97
PKP3-205ENST00000527442 ILDR2Q71H61 639 aa33.58■■■□□ 2.97
PKP3-205ENST00000527442 ZMYM3Q14202 1370 aa33.58■■■□□ 2.97
PKP3-205ENST00000527442 IQSEC2Q5JU85 1478 aa33.57■■■□□ 2.97
PKP3-205ENST00000527442 SPATA31D1Q6ZQQ2 1576 aa33.56■■■□□ 2.96
PKP3-205ENST00000527442 KIAA1107Q9UPP5 1409 aa33.54■■■□□ 2.96
PKP3-205ENST00000527442 A2MP01023 1474 aa33.54■■■□□ 2.96
PKP3-205ENST00000527442 PLEKHH2Q8IVE3 1493 aa33.54■■■□□ 2.96
PKP3-205ENST00000527442 ADGBQ8N7X0 1667 aa33.5■■■□□ 2.95
PKP3-205ENST00000527442 CCNB3Q8WWL7 1395 aa33.49■■■□□ 2.95
PKP3-205ENST00000527442 CEP170BQ9Y4F5 1589 aaPredicted RBP33.49■■■□□ 2.95
PKP3-205ENST00000527442 CFDP1Q9UEE9 299 aaPredicted RBP33.48■■■□□ 2.95
PKP3-205ENST00000527442 PTPRKQ15262 1439 aa33.46■■■□□ 2.95
PKP3-205ENST00000527442 NCKAP5LQ9HCH0 1330 aa33.46■■■□□ 2.95
PKP3-205ENST00000527442 TIAM1Q13009 1591 aa33.45■■■□□ 2.95
PKP3-205ENST00000527442 PLA2R1Q13018 1463 aa33.44■■■□□ 2.94
PKP3-205ENST00000527442 MTUS2Q5JR59 1369 aa33.42■■■□□ 2.94
PKP3-205ENST00000527442 ZNF335Q9H4Z2 1342 aaPredicted RBP33.41■■■□□ 2.94
PKP3-205ENST00000527442 TCOF1Q13428 1488 aaKnown RBP33.4■■■□□ 2.94
PKP3-205ENST00000527442 GGT6Q6P531 493 aa33.4■■■□□ 2.94
PKP3-205ENST00000527442 SOCS7O14512 581 aa33.39■■■□□ 2.94
PKP3-205ENST00000527442 EHBP1L1Q8N3D4 1523 aa33.36■■■□□ 2.93
PKP3-205ENST00000527442 ZNF644Q9H582 1327 aaPredicted RBP33.35■■■□□ 2.93
PKP3-205ENST00000527442 MBD5Q9P267 1494 aa33.35■■■□□ 2.93
PKP3-205ENST00000527442 CEP162Q5TB80 1403 aa33.34■■■□□ 2.93
PKP3-205ENST00000527442 PKD2Q13563 968 aa33.32■■■□□ 2.92
PKP3-205ENST00000527442 DNMT1P26358 1616 aaKnown RBP33.31■■■□□ 2.92
PKP3-205ENST00000527442 A2ML1A8K2U0 1454 aa33.29■■■□□ 2.92
PKP3-205ENST00000527442 POLR1AO95602 1720 aaPredicted RBP33.28■■■□□ 2.92
PKP3-205ENST00000527442 PPP6R1Q9UPN7 881 aa33.27■■■□□ 2.92
PKP3-205ENST00000527442 RTEL1-TNFRSF6BF6WH68 1400 aa33.27■■■□□ 2.92
PKP3-205ENST00000527442 UBAP1LF5GYI3 381 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms