RNA–Protein interactions for RNA: ENST00000527390.1

USP33-214, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-214ENST00000527390 HS3ST6Q96QI5 342 aa13.42□□□□□ -0.26
USP33-214ENST00000527390 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
USP33-214ENST00000527390 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
USP33-214ENST00000527390 RIMBP2O15034 1052 aa13.31□□□□□ -0.28
USP33-214ENST00000527390 SPNS2Q8IVW8 549 aa13.31□□□□□ -0.28
USP33-214ENST00000527390 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
USP33-214ENST00000527390 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
USP33-214ENST00000527390 ERBB3P21860 1342 aa13.29□□□□□ -0.28
USP33-214ENST00000527390 MMRN1Q13201 1228 aa13.27□□□□□ -0.29
USP33-214ENST00000527390 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
USP33-214ENST00000527390 PPP1R37O75864 691 aa13.23□□□□□ -0.29
USP33-214ENST00000527390 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
USP33-214ENST00000527390 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
USP33-214ENST00000527390 KHSRPQ92945 711 aaKnown RBP eCLIP13.22□□□□□ -0.294e-6■■□□□ 12.6
USP33-214ENST00000527390 ARSIQ5FYB1 569 aa13.21□□□□□ -0.29
USP33-214ENST00000527390 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
USP33-214ENST00000527390 KIF3CO14782 793 aa13.18□□□□□ -0.3
USP33-214ENST00000527390 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
USP33-214ENST00000527390 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
USP33-214ENST00000527390 TMC2Q8TDI7 906 aa13.13□□□□□ -0.31
USP33-214ENST00000527390 NUDT7P0C024 238 aa13.08□□□□□ -0.32
USP33-214ENST00000527390 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
USP33-214ENST00000527390 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
USP33-214ENST00000527390 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
USP33-214ENST00000527390 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
USP33-214ENST00000527390 LHX6Q9UPM6 363 aa12.99□□□□□ -0.33
USP33-214ENST00000527390 SLC34A2O95436 690 aa12.97□□□□□ -0.33
USP33-214ENST00000527390 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
USP33-214ENST00000527390 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
USP33-214ENST00000527390 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
USP33-214ENST00000527390 DSG2Q14126 1118 aa12.93□□□□□ -0.34
USP33-214ENST00000527390 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
USP33-214ENST00000527390 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
USP33-214ENST00000527390 FOXK1P85037 733 aa12.92□□□□□ -0.34
USP33-214ENST00000527390 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
USP33-214ENST00000527390 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
USP33-214ENST00000527390 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
USP33-214ENST00000527390 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
USP33-214ENST00000527390 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP33-214ENST00000527390 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
USP33-214ENST00000527390 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP33-214ENST00000527390 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
USP33-214ENST00000527390 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
USP33-214ENST00000527390 PBX2P40425 430 aa12.81□□□□□ -0.36
USP33-214ENST00000527390 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
USP33-214ENST00000527390 CRISPLD2Q9H0B8 497 aa12.8□□□□□ -0.36
USP33-214ENST00000527390 PTGER2P43116 358 aa12.78□□□□□ -0.36
USP33-214ENST00000527390 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
USP33-214ENST00000527390 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
USP33-214ENST00000527390 TBC1D12O60347 775 aa12.76□□□□□ -0.37
USP33-214ENST00000527390 PSEN2P49810 448 aa12.75□□□□□ -0.37
USP33-214ENST00000527390 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
USP33-214ENST00000527390 ARHGAP33O14559 1287 aa12.73□□□□□ -0.37
USP33-214ENST00000527390 DMRTA1Q5VZB9 504 aa12.73□□□□□ -0.37
USP33-214ENST00000527390 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
USP33-214ENST00000527390 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
USP33-214ENST00000527390 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
USP33-214ENST00000527390 PDE4AP27815 886 aa12.7□□□□□ -0.38
USP33-214ENST00000527390 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
USP33-214ENST00000527390 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
USP33-214ENST00000527390 ZNF454Q8N9F8 522 aa12.66□□□□□ -0.38
USP33-214ENST00000527390 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
USP33-214ENST00000527390 DDX27Q96GQ7 796 aaKnown RBP12.65□□□□□ -0.38
USP33-214ENST00000527390 HRO43593 1189 aa12.59□□□□□ -0.39
USP33-214ENST00000527390 EVI5O60447 810 aa12.59□□□□□ -0.39
USP33-214ENST00000527390 MFSD10Q14728 455 aa12.59□□□□□ -0.39
USP33-214ENST00000527390 TK2O00142 265 aa12.58□□□□□ -0.4
USP33-214ENST00000527390 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
USP33-214ENST00000527390 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
USP33-214ENST00000527390 FOSBP53539 338 aa12.56□□□□□ -0.4
USP33-214ENST00000527390 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
USP33-214ENST00000527390 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
USP33-214ENST00000527390 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
USP33-214ENST00000527390 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
USP33-214ENST00000527390 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
USP33-214ENST00000527390 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
USP33-214ENST00000527390 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
USP33-214ENST00000527390 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
USP33-214ENST00000527390 PTPREP23469 700 aa12.5□□□□□ -0.41
USP33-214ENST00000527390 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
USP33-214ENST00000527390 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
USP33-214ENST00000527390 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
USP33-214ENST00000527390 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
USP33-214ENST00000527390 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
USP33-214ENST00000527390 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
USP33-214ENST00000527390 DPYSL4O14531 572 aa12.42□□□□□ -0.42
USP33-214ENST00000527390 PTPN5P54829 565 aa12.41□□□□□ -0.42
USP33-214ENST00000527390 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
USP33-214ENST00000527390 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
USP33-214ENST00000527390 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
USP33-214ENST00000527390 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
USP33-214ENST00000527390 COL9A1P20849 921 aa12.37□□□□□ -0.43
USP33-214ENST00000527390 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
USP33-214ENST00000527390 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
USP33-214ENST00000527390 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
USP33-214ENST00000527390 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
USP33-214ENST00000527390 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
USP33-214ENST00000527390 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
USP33-214ENST00000527390 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
USP33-214ENST00000527390 PHF14O94880 888 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms