RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GPR153Q6NV75 609 aa9.83□□□□□ -0.84
CLNS1A-209ENST00000527299 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
CLNS1A-209ENST00000527299 ZNF687Q8N1G0 1237 aa9.81□□□□□ -0.84
CLNS1A-209ENST00000527299 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
CLNS1A-209ENST00000527299 NLRP6P59044 892 aa9.74□□□□□ -0.85
CLNS1A-209ENST00000527299 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
CLNS1A-209ENST00000527299 FBXO22Q8NEZ5 403 aa9.74□□□□□ -0.85
CLNS1A-209ENST00000527299 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
CLNS1A-209ENST00000527299 PTGER2P43116 358 aa9.7□□□□□ -0.86
CLNS1A-209ENST00000527299 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
CLNS1A-209ENST00000527299 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
CLNS1A-209ENST00000527299 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLNS1A-209ENST00000527299 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
CLNS1A-209ENST00000527299 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
CLNS1A-209ENST00000527299 KIF3CO14782 793 aa9.67□□□□□ -0.86
CLNS1A-209ENST00000527299 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
CLNS1A-209ENST00000527299 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
CLNS1A-209ENST00000527299 C2orf72A6NCS6 295 aa9.63□□□□□ -0.87
CLNS1A-209ENST00000527299 STK25O00506 426 aa9.61□□□□□ -0.87
CLNS1A-209ENST00000527299 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLNS1A-209ENST00000527299 SLC34A2O95436 690 aa9.6□□□□□ -0.87
CLNS1A-209ENST00000527299 NUDT7P0C024 238 aa9.59□□□□□ -0.87
CLNS1A-209ENST00000527299 PBX2P40425 430 aa9.57□□□□□ -0.88
CLNS1A-209ENST00000527299 POTEEQ6S8J3 1075 aa9.57□□□□□ -0.88
CLNS1A-209ENST00000527299 ECM2O94769 699 aaPredicted RBP9.56□□□□□ -0.88
CLNS1A-209ENST00000527299 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
CLNS1A-209ENST00000527299 PCDHGA4Q9Y5G9 962 aa9.56□□□□□ -0.88
CLNS1A-209ENST00000527299 TMC2Q8TDI7 906 aa9.53□□□□□ -0.88
CLNS1A-209ENST00000527299 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
CLNS1A-209ENST00000527299 RGL2O15211 777 aa9.51□□□□□ -0.89
CLNS1A-209ENST00000527299 PKD2Q13563 968 aa9.5□□□□□ -0.89
CLNS1A-209ENST00000527299 PPP1R37O75864 691 aa9.49□□□□□ -0.89
CLNS1A-209ENST00000527299 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
CLNS1A-209ENST00000527299 PSDA5PKW4 1024 aaPredicted RBP9.46□□□□□ -0.9
CLNS1A-209ENST00000527299 ARHGAP33O14559 1287 aa9.46□□□□□ -0.9
CLNS1A-209ENST00000527299 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
CLNS1A-209ENST00000527299 PTCD2Q8WV60 388 aaKnown RBP9.45□□□□□ -0.9
CLNS1A-209ENST00000527299 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
CLNS1A-209ENST00000527299 FOXK1P85037 733 aa9.41□□□□□ -0.9
CLNS1A-209ENST00000527299 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
CLNS1A-209ENST00000527299 TK2O00142 265 aa9.4□□□□□ -0.9
CLNS1A-209ENST00000527299 HRO43593 1189 aa9.39□□□□□ -0.91
CLNS1A-209ENST00000527299 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
CLNS1A-209ENST00000527299 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
CLNS1A-209ENST00000527299 GPHNQ9NQX3 736 aaPredicted RBP9.38□□□□□ -0.91
CLNS1A-209ENST00000527299 PSEN2P49810 448 aa9.37□□□□□ -0.91
CLNS1A-209ENST00000527299 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
CLNS1A-209ENST00000527299 DSG2Q14126 1118 aa9.34□□□□□ -0.91
CLNS1A-209ENST00000527299 TBC1D12O60347 775 aa9.33□□□□□ -0.92
CLNS1A-209ENST00000527299 HS6ST3Q8IZP7 471 aa9.33□□□□□ -0.92
CLNS1A-209ENST00000527299 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
CLNS1A-209ENST00000527299 OXER1Q8TDS5 423 aa9.27□□□□□ -0.93
CLNS1A-209ENST00000527299 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
CLNS1A-209ENST00000527299 STAC3Q96MF2 364 aa9.26□□□□□ -0.93
CLNS1A-209ENST00000527299 VPS9D1Q9Y2B5 631 aa9.26□□□□□ -0.93
CLNS1A-209ENST00000527299 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CLNS1A-209ENST00000527299 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
CLNS1A-209ENST00000527299 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
CLNS1A-209ENST00000527299 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
CLNS1A-209ENST00000527299 BCL2L12Q9HB09 334 aa9.22□□□□□ -0.93
CLNS1A-209ENST00000527299 CHGAP10645 457 aaKnown RBP9.21□□□□□ -0.94
CLNS1A-209ENST00000527299 NKX1-1Q15270 411 aaPredicted RBP9.21□□□□□ -0.94
CLNS1A-209ENST00000527299 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
CLNS1A-209ENST00000527299 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLNS1A-209ENST00000527299 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
CLNS1A-209ENST00000527299 FOSBP53539 338 aa9.18□□□□□ -0.94
CLNS1A-209ENST00000527299 PTPN5P54829 565 aa9.18□□□□□ -0.94
CLNS1A-209ENST00000527299 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
CLNS1A-209ENST00000527299 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
CLNS1A-209ENST00000527299 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
CLNS1A-209ENST00000527299 RYDENQ9NUL5 291 aaKnown RBP9.17□□□□□ -0.94
CLNS1A-209ENST00000527299 PTPREP23469 700 aa9.16□□□□□ -0.94
CLNS1A-209ENST00000527299 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
CLNS1A-209ENST00000527299 ZBED2Q9BTP6 218 aa9.15□□□□□ -0.94
CLNS1A-209ENST00000527299 NCKAP5LQ9HCH0 1330 aa9.14□□□□□ -0.95
CLNS1A-209ENST00000527299 RGS20O76081 388 aa9.14□□□□□ -0.95
CLNS1A-209ENST00000527299 JPH4Q96JJ6 628 aa9.14□□□□□ -0.95
CLNS1A-209ENST00000527299 PDE4AP27815 886 aa9.13□□□□□ -0.95
CLNS1A-209ENST00000527299 EVI5O60447 810 aa9.11□□□□□ -0.95
CLNS1A-209ENST00000527299 ZDHHC16Q969W1 377 aa9.11□□□□□ -0.95
CLNS1A-209ENST00000527299 GOLGA8CPA6NN73 597 aa9.1□□□□□ -0.95
CLNS1A-209ENST00000527299 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
CLNS1A-209ENST00000527299 WNT2BQ93097 391 aa9.1□□□□□ -0.95
CLNS1A-209ENST00000527299 ADAM33Q9BZ11 813 aa9.1□□□□□ -0.95
CLNS1A-209ENST00000527299 A0A0G2JS52 829 aa9.07□□□□□ -0.96
CLNS1A-209ENST00000527299 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
CLNS1A-209ENST00000527299 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
CLNS1A-209ENST00000527299 DDX27Q96GQ7 796 aaKnown RBP9.05□□□□□ -0.96
CLNS1A-209ENST00000527299 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
CLNS1A-209ENST00000527299 MFSD10Q14728 455 aa9.04□□□□□ -0.96
CLNS1A-209ENST00000527299 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
CLNS1A-209ENST00000527299 MAP3K9P80192 1104 aa9.03□□□□□ -0.96
CLNS1A-209ENST00000527299 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
CLNS1A-209ENST00000527299 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
CLNS1A-209ENST00000527299 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
CLNS1A-209ENST00000527299 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
CLNS1A-209ENST00000527299 COL9A1P20849 921 aa8.99□□□□□ -0.97
CLNS1A-209ENST00000527299 PROX2Q3B8N5 592 aa8.99□□□□□ -0.97
CLNS1A-209ENST00000527299 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
CLNS1A-209ENST00000527299 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms