RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 SCAPERQ9BY12 1400 aa21.84■■□□□ 1.09
CLNS1A-207ENST00000527133 CERKQ8TCT0 537 aa21.83■■□□□ 1.09
CLNS1A-207ENST00000527133 PLCH2O75038 1416 aa21.81■■□□□ 1.08
CLNS1A-207ENST00000527133 ATP10AO60312 1499 aa21.77■■□□□ 1.08
CLNS1A-207ENST00000527133 ARHGEF12Q9NZN5 1544 aa21.77■■□□□ 1.08
CLNS1A-207ENST00000527133 ATP1B4Q9UN42 357 aaPredicted RBP21.77■■□□□ 1.08
CLNS1A-207ENST00000527133 C9orf84Q5VXU9 1444 aa21.76■■□□□ 1.07
CLNS1A-207ENST00000527133 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
CLNS1A-207ENST00000527133 CEBPAP49715 358 aaPredicted RBP21.73■■□□□ 1.07
CLNS1A-207ENST00000527133 PREX1Q8TCU6 1659 aa21.72■■□□□ 1.07
CLNS1A-207ENST00000527133 MYO5CQ9NQX4 1742 aa21.72■■□□□ 1.07
CLNS1A-207ENST00000527133 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
CLNS1A-207ENST00000527133 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
CLNS1A-207ENST00000527133 FMN1Q68DA7 1419 aa21.68■■□□□ 1.06
CLNS1A-207ENST00000527133 ZNF518AQ6AHZ1 1483 aa21.68■■□□□ 1.06
CLNS1A-207ENST00000527133 KIF14Q15058 1648 aa21.68■■□□□ 1.06
CLNS1A-207ENST00000527133 ARHGAP5Q13017 1502 aa21.66■■□□□ 1.06
CLNS1A-207ENST00000527133 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
CLNS1A-207ENST00000527133 AFAP1Q8N556 730 aa21.66■■□□□ 1.06
CLNS1A-207ENST00000527133 MYT1LQ9UL68 1186 aa21.66■■□□□ 1.06
CLNS1A-207ENST00000527133 UHRF1BP1Q6BDS2 1440 aa21.64■■□□□ 1.06
CLNS1A-207ENST00000527133 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
CLNS1A-207ENST00000527133 STRCQ7RTU9 1775 aa21.64■■□□□ 1.05
CLNS1A-207ENST00000527133 KDM5CP41229 1560 aa21.63■■□□□ 1.05
CLNS1A-207ENST00000527133 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
CLNS1A-207ENST00000527133 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
CLNS1A-207ENST00000527133 CLIP1P30622 1438 aa21.61■■□□□ 1.05
CLNS1A-207ENST00000527133 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
CLNS1A-207ENST00000527133 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
CLNS1A-207ENST00000527133 ABCA6Q8N139 1617 aa21.57■■□□□ 1.04
CLNS1A-207ENST00000527133 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
CLNS1A-207ENST00000527133 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
CLNS1A-207ENST00000527133 C3P01024 1663 aa21.54■■□□□ 1.04
CLNS1A-207ENST00000527133 MLH3Q9UHC1 1453 aa21.54■■□□□ 1.04
CLNS1A-207ENST00000527133 ILDR2Q71H61 639 aa21.54■■□□□ 1.04
CLNS1A-207ENST00000527133 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
CLNS1A-207ENST00000527133 CDC42BPBQ9Y5S2 1711 aa21.53■■□□□ 1.04
CLNS1A-207ENST00000527133 ESF1Q9H501 851 aaKnown RBP21.53■■□□□ 1.04
CLNS1A-207ENST00000527133 PTPRTO14522 1441 aa21.52■■□□□ 1.04
CLNS1A-207ENST00000527133 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
CLNS1A-207ENST00000527133 ABCC1P33527 1531 aa21.5■■□□□ 1.03
CLNS1A-207ENST00000527133 AGLP35573 1532 aa21.5■■□□□ 1.03
CLNS1A-207ENST00000527133 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
CLNS1A-207ENST00000527133 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
CLNS1A-207ENST00000527133 SOCS7O14512 581 aa21.46■■□□□ 1.03
CLNS1A-207ENST00000527133 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
CLNS1A-207ENST00000527133 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
CLNS1A-207ENST00000527133 CNTLNQ9NXG0 1405 aa21.44■■□□□ 1.02
CLNS1A-207ENST00000527133 LTBP4Q8N2S1 1624 aa21.44■■□□□ 1.02
CLNS1A-207ENST00000527133 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
CLNS1A-207ENST00000527133 SPATA31D1Q6ZQQ2 1576 aa21.43■■□□□ 1.02
CLNS1A-207ENST00000527133 CASKIN1Q8WXD9 1431 aa21.41■■□□□ 1.02
CLNS1A-207ENST00000527133 CDC42BPAQ5VT25 1732 aa21.39■■□□□ 1.01
CLNS1A-207ENST00000527133 ZNF777Q9ULD5 760 aaPredicted RBP21.38■■□□□ 1.01
CLNS1A-207ENST00000527133 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
CLNS1A-207ENST00000527133 CAMSAP1Q5T5Y3 1602 aa21.37■■□□□ 1.01
CLNS1A-207ENST00000527133 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
CLNS1A-207ENST00000527133 NPATQ14207 1427 aa21.37■■□□□ 1.01
CLNS1A-207ENST00000527133 MROH2AA6NES4 1674 aa21.35■■□□□ 1.01
CLNS1A-207ENST00000527133 ZMYM3Q14202 1370 aa21.35■■□□□ 1.01
CLNS1A-207ENST00000527133 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
CLNS1A-207ENST00000527133 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
CLNS1A-207ENST00000527133 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
CLNS1A-207ENST00000527133 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
CLNS1A-207ENST00000527133 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
CLNS1A-207ENST00000527133 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
CLNS1A-207ENST00000527133 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
CLNS1A-207ENST00000527133 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
CLNS1A-207ENST00000527133 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
CLNS1A-207ENST00000527133 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
CLNS1A-207ENST00000527133 ATP7AQ04656 1500 aa21.28■■□□□ 1
CLNS1A-207ENST00000527133 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
CLNS1A-207ENST00000527133 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
CLNS1A-207ENST00000527133 PLXNC1O60486 1568 aa21.26■□□□□ 0.99
CLNS1A-207ENST00000527133 A2MP01023 1474 aa21.26■□□□□ 0.99
CLNS1A-207ENST00000527133 ZNF142P52746 1687 aaPredicted RBP21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 INO80Q9ULG1 1556 aaPredicted RBP21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 PTPRKQ15262 1439 aa21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 GGT6Q6P531 493 aa21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 PLA2R1Q13018 1463 aa21.24■□□□□ 0.99
CLNS1A-207ENST00000527133 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
CLNS1A-207ENST00000527133 PKD2Q13563 968 aa21.23■□□□□ 0.99
CLNS1A-207ENST00000527133 PLEKHH2Q8IVE3 1493 aa21.23■□□□□ 0.99
CLNS1A-207ENST00000527133 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
CLNS1A-207ENST00000527133 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
CLNS1A-207ENST00000527133 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
CLNS1A-207ENST00000527133 MTUS2Q5JR59 1369 aa21.15■□□□□ 0.98
CLNS1A-207ENST00000527133 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
CLNS1A-207ENST00000527133 ZNF644Q9H582 1327 aaPredicted RBP21.13■□□□□ 0.97
CLNS1A-207ENST00000527133 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
CLNS1A-207ENST00000527133 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
CLNS1A-207ENST00000527133 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
CLNS1A-207ENST00000527133 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
CLNS1A-207ENST00000527133 MBD5Q9P267 1494 aa21.08■□□□□ 0.97
CLNS1A-207ENST00000527133 PIP4K2BP78356 416 aa21.07■□□□□ 0.96
CLNS1A-207ENST00000527133 TNRQ92752 1358 aa21.07■□□□□ 0.96
CLNS1A-207ENST00000527133 HSPA1LP34931 641 aa21.06■□□□□ 0.96
CLNS1A-207ENST00000527133 FBXO31Q5XUX0 539 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms