RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SCAPERQ9BY12 1400 aa31.09■■■□□ 2.57
CAPN1-206ENST00000526966 KIF14Q15058 1648 aa31.08■■■□□ 2.57
CAPN1-206ENST00000526966 LRRIQ1Q96JM4 1722 aa31.07■■■□□ 2.56
CAPN1-206ENST00000526966 CHIC1Q5VXU3 224 aa31.06■■■□□ 2.56
CAPN1-206ENST00000526966 EHMT2Q96KQ7 1210 aa31.06■■■□□ 2.56
CAPN1-206ENST00000526966 FER1L4A9Z1Z3 1794 aa31.03■■■□□ 2.56
CAPN1-206ENST00000526966 TROQ12816 1431 aaPredicted RBP31.02■■■□□ 2.56
CAPN1-206ENST00000526966 CDK11AQ9UQ88 783 aaPredicted RBP31.02■■■□□ 2.56
CAPN1-206ENST00000526966 ATP1B4Q9UN42 357 aaPredicted RBP31.01■■■□□ 2.55
CAPN1-206ENST00000526966 EFCAB2Q5VUJ9 269 aa30.99■■■□□ 2.55
CAPN1-206ENST00000526966 ATP10AO60312 1499 aa30.96■■■□□ 2.55
CAPN1-206ENST00000526966 ARHGEF12Q9NZN5 1544 aa30.95■■■□□ 2.55
CAPN1-206ENST00000526966 C9orf84Q5VXU9 1444 aa30.95■■■□□ 2.54
CAPN1-206ENST00000526966 KDM5CP41229 1560 aa30.95■■■□□ 2.54
CAPN1-206ENST00000526966 CLIP1P30622 1438 aa30.94■■■□□ 2.54
CAPN1-206ENST00000526966 ZNF518AQ6AHZ1 1483 aa30.94■■■□□ 2.54
CAPN1-206ENST00000526966 ARHGAP5Q13017 1502 aa30.93■■■□□ 2.54
CAPN1-206ENST00000526966 FBXO41Q8TF61 875 aa30.93■■■□□ 2.54
CAPN1-206ENST00000526966 CDC42BPBQ9Y5S2 1711 aa30.92■■■□□ 2.54
CAPN1-206ENST00000526966 MLECQ14165 292 aa30.88■■■□□ 2.53
CAPN1-206ENST00000526966 PREX2Q70Z35 1606 aa30.87■■■□□ 2.53
CAPN1-206ENST00000526966 CCDC18Q5T9S5 1454 aa30.86■■■□□ 2.53
CAPN1-206ENST00000526966 CASKIN1Q8WXD9 1431 aa30.85■■■□□ 2.53
CAPN1-206ENST00000526966 HSPA2P54652 639 aa30.84■■■□□ 2.53
CAPN1-206ENST00000526966 REREQ9P2R6 1566 aa30.83■■■□□ 2.53
CAPN1-206ENST00000526966 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
CAPN1-206ENST00000526966 PLPPR3Q6T4P5 718 aa30.83■■■□□ 2.53
CAPN1-206ENST00000526966 PREX1Q8TCU6 1659 aa30.81■■■□□ 2.52
CAPN1-206ENST00000526966 ABCC1P33527 1531 aa30.8■■■□□ 2.52
CAPN1-206ENST00000526966 AFAP1Q8N556 730 aa30.8■■■□□ 2.52
CAPN1-206ENST00000526966 ABCA6Q8N139 1617 aa30.79■■■□□ 2.52
CAPN1-206ENST00000526966 ITSN2Q9NZM3 1697 aa30.78■■■□□ 2.52
CAPN1-206ENST00000526966 MLH3Q9UHC1 1453 aa30.78■■■□□ 2.52
CAPN1-206ENST00000526966 CDC42BPAQ5VT25 1732 aa30.77■■■□□ 2.52
CAPN1-206ENST00000526966 FYCO1Q9BQS8 1478 aa30.75■■■□□ 2.51
CAPN1-206ENST00000526966 TRAPPC8Q9Y2L5 1435 aa30.72■■■□□ 2.51
CAPN1-206ENST00000526966 SETD1BQ9UPS6 1966 aaKnown RBP30.7■■■□□ 2.51
CAPN1-206ENST00000526966 AGLP35573 1532 aa30.7■■■□□ 2.51
CAPN1-206ENST00000526966 KIDINS220Q9ULH0 1771 aa30.69■■■□□ 2.5
CAPN1-206ENST00000526966 CEBPAP49715 358 aaPredicted RBP30.67■■■□□ 2.5
CAPN1-206ENST00000526966 MYT1LQ9UL68 1186 aa30.65■■■□□ 2.5
CAPN1-206ENST00000526966 C3P01024 1663 aa30.65■■■□□ 2.5
CAPN1-206ENST00000526966 STRCQ7RTU9 1775 aa30.61■■■□□ 2.49
CAPN1-206ENST00000526966 SAMD9LQ8IVG5 1584 aa30.61■■■□□ 2.49
CAPN1-206ENST00000526966 UHRF1BP1Q6BDS2 1440 aa30.6■■■□□ 2.49
CAPN1-206ENST00000526966 GPATCH8Q9UKJ3 1502 aaKnown RBP30.57■■■□□ 2.48
CAPN1-206ENST00000526966 SYCP2Q9BX26 1530 aa30.56■■■□□ 2.48
CAPN1-206ENST00000526966 CERKQ8TCT0 537 aa30.54■■■□□ 2.48
CAPN1-206ENST00000526966 CNTLNQ9NXG0 1405 aa30.5■■■□□ 2.47
CAPN1-206ENST00000526966 MROH2AA6NES4 1674 aa30.49■■■□□ 2.47
CAPN1-206ENST00000526966 INO80Q9ULG1 1556 aaPredicted RBP30.47■■■□□ 2.47
CAPN1-206ENST00000526966 KIAA1107Q9UPP5 1409 aa30.47■■■□□ 2.47
CAPN1-206ENST00000526966 ZNF777Q9ULD5 760 aaPredicted RBP30.46■■■□□ 2.47
CAPN1-206ENST00000526966 ATP7AQ04656 1500 aa30.46■■■□□ 2.47
CAPN1-206ENST00000526966 PLEKHH2Q8IVE3 1493 aa30.45■■■□□ 2.47
CAPN1-206ENST00000526966 ESF1Q9H501 851 aaKnown RBP30.45■■■□□ 2.47
CAPN1-206ENST00000526966 DMRT2Q9Y5R5 561 aa30.45■■■□□ 2.47
CAPN1-206ENST00000526966 PLXNC1O60486 1568 aa30.44■■■□□ 2.46
CAPN1-206ENST00000526966 SUPT6HQ7KZ85 1726 aaKnown RBP30.44■■■□□ 2.46
CAPN1-206ENST00000526966 SPAG9O60271 1321 aaKnown RBP30.43■■■□□ 2.46
CAPN1-206ENST00000526966 PTPRTO14522 1441 aa30.4■■■□□ 2.46
CAPN1-206ENST00000526966 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.46
CAPN1-206ENST00000526966 CCNB3Q8WWL7 1395 aa30.4■■■□□ 2.46
CAPN1-206ENST00000526966 CFDP1Q9UEE9 299 aaPredicted RBP30.38■■■□□ 2.45
CAPN1-206ENST00000526966 MTUS2Q5JR59 1369 aa30.38■■■□□ 2.45
CAPN1-206ENST00000526966 NPATQ14207 1427 aa30.38■■■□□ 2.45
CAPN1-206ENST00000526966 TIAM1Q13009 1591 aa30.37■■■□□ 2.45
CAPN1-206ENST00000526966 A2MP01023 1474 aa30.35■■■□□ 2.45
CAPN1-206ENST00000526966 EHBP1L1Q8N3D4 1523 aa30.35■■■□□ 2.45
CAPN1-206ENST00000526966 CLTCQ00610 1675 aaKnown RBP30.34■■■□□ 2.45
CAPN1-206ENST00000526966 ADGBQ8N7X0 1667 aa30.33■■■□□ 2.45
CAPN1-206ENST00000526966 NCOA1Q15788 1441 aa30.33■■■□□ 2.45
CAPN1-206ENST00000526966 ZMYM3Q14202 1370 aa30.31■■■□□ 2.44
CAPN1-206ENST00000526966 ZNF142P52746 1687 aaPredicted RBP30.28■■■□□ 2.44
CAPN1-206ENST00000526966 MBD5Q9P267 1494 aa30.27■■■□□ 2.44
CAPN1-206ENST00000526966 CAMSAP1Q5T5Y3 1602 aa30.27■■■□□ 2.44
CAPN1-206ENST00000526966 LTBP4Q8N2S1 1624 aa30.27■■■□□ 2.44
CAPN1-206ENST00000526966 CEP162Q5TB80 1403 aa30.27■■■□□ 2.44
CAPN1-206ENST00000526966 MYO3AQ8NEV4 1616 aa30.25■■■□□ 2.43
CAPN1-206ENST00000526966 ZNF644Q9H582 1327 aaPredicted RBP30.22■■■□□ 2.43
CAPN1-206ENST00000526966 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
CAPN1-206ENST00000526966 RTEL1-TNFRSF6BF6WH68 1400 aa30.21■■■□□ 2.43
CAPN1-206ENST00000526966 CEP170BQ9Y4F5 1589 aaPredicted RBP30.19■■■□□ 2.42
CAPN1-206ENST00000526966 IQSEC2Q5JU85 1478 aa30.19■■■□□ 2.42
CAPN1-206ENST00000526966 PPP6R1Q9UPN7 881 aa30.17■■■□□ 2.42
CAPN1-206ENST00000526966 PLA2R1Q13018 1463 aa30.17■■■□□ 2.42
CAPN1-206ENST00000526966 GGT6Q6P531 493 aa30.16■■■□□ 2.42
CAPN1-206ENST00000526966 NCOA2Q15596 1464 aa30.12■■■□□ 2.41
CAPN1-206ENST00000526966 TCOF1Q13428 1488 aaKnown RBP30.12■■■□□ 2.41
CAPN1-206ENST00000526966 CCDC141Q6ZP82 1450 aa30.12■■■□□ 2.41
CAPN1-206ENST00000526966 DHX29Q7Z478 1369 aaKnown RBP30.11■■■□□ 2.41
CAPN1-206ENST00000526966 CAMSAP2Q08AD1 1489 aa30.11■■■□□ 2.41
CAPN1-206ENST00000526966 FAM135AQ9P2D6 1515 aa30.07■■■□□ 2.4
CAPN1-206ENST00000526966 NCKAP5LQ9HCH0 1330 aa30.07■■■□□ 2.4
CAPN1-206ENST00000526966 PKD2Q13563 968 aa30.05■■■□□ 2.4
CAPN1-206ENST00000526966 ARHGEF5Q12774 1597 aa30.04■■■□□ 2.4
CAPN1-206ENST00000526966 A2ML1A8K2U0 1454 aa30.04■■■□□ 2.4
CAPN1-206ENST00000526966 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
CAPN1-206ENST00000526966 KDM5DQ9BY66 1539 aa30.02■■■□□ 2.4
CAPN1-206ENST00000526966 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms