RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
RPUSD4-203ENST00000526942 CERKQ8TCT0 537 aa19.4■□□□□ 0.7
RPUSD4-203ENST00000526942 PLCH2O75038 1416 aa19.4■□□□□ 0.7
RPUSD4-203ENST00000526942 ARHGEF12Q9NZN5 1544 aa19.38■□□□□ 0.69
RPUSD4-203ENST00000526942 ATP10AO60312 1499 aa19.36■□□□□ 0.69
RPUSD4-203ENST00000526942 C9orf84Q5VXU9 1444 aa19.36■□□□□ 0.69
RPUSD4-203ENST00000526942 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
RPUSD4-203ENST00000526942 MYO5CQ9NQX4 1742 aa19.32■□□□□ 0.68
RPUSD4-203ENST00000526942 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
RPUSD4-203ENST00000526942 CEBPAP49715 358 aaPredicted RBP19.29■□□□□ 0.68
RPUSD4-203ENST00000526942 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
RPUSD4-203ENST00000526942 KIF14Q15058 1648 aa19.28■□□□□ 0.68
RPUSD4-203ENST00000526942 FMN1Q68DA7 1419 aa19.27■□□□□ 0.68
RPUSD4-203ENST00000526942 KDM5CP41229 1560 aa19.26■□□□□ 0.67
RPUSD4-203ENST00000526942 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
RPUSD4-203ENST00000526942 STRCQ7RTU9 1775 aa19.25■□□□□ 0.67
RPUSD4-203ENST00000526942 UHRF1BP1Q6BDS2 1440 aa19.24■□□□□ 0.67
RPUSD4-203ENST00000526942 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
RPUSD4-203ENST00000526942 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
RPUSD4-203ENST00000526942 DIP2CQ9Y2E4 1556 aa19.23■□□□□ 0.67
RPUSD4-203ENST00000526942 TROQ12816 1431 aaPredicted RBP19.23■□□□□ 0.67
RPUSD4-203ENST00000526942 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
RPUSD4-203ENST00000526942 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
RPUSD4-203ENST00000526942 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
RPUSD4-203ENST00000526942 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
RPUSD4-203ENST00000526942 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
RPUSD4-203ENST00000526942 CLIP1P30622 1438 aa19.18■□□□□ 0.66
RPUSD4-203ENST00000526942 DISP3Q9P2K9 1392 aa19.18■□□□□ 0.66
RPUSD4-203ENST00000526942 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
RPUSD4-203ENST00000526942 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
RPUSD4-203ENST00000526942 MLH3Q9UHC1 1453 aa19.17■□□□□ 0.66
RPUSD4-203ENST00000526942 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
RPUSD4-203ENST00000526942 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
RPUSD4-203ENST00000526942 C3P01024 1663 aa19.16■□□□□ 0.66
RPUSD4-203ENST00000526942 PTPRTO14522 1441 aa19.16■□□□□ 0.66
RPUSD4-203ENST00000526942 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
RPUSD4-203ENST00000526942 CDC42BPBQ9Y5S2 1711 aa19.15■□□□□ 0.66
RPUSD4-203ENST00000526942 ILDR2Q71H61 639 aa19.15■□□□□ 0.66
RPUSD4-203ENST00000526942 AGLP35573 1532 aa19.15■□□□□ 0.66
RPUSD4-203ENST00000526942 ABCC1P33527 1531 aa19.13■□□□□ 0.65
RPUSD4-203ENST00000526942 PREX2Q70Z35 1606 aa19.12■□□□□ 0.65
RPUSD4-203ENST00000526942 TRAPPC8Q9Y2L5 1435 aa19.12■□□□□ 0.65
RPUSD4-203ENST00000526942 ITSN2Q9NZM3 1697 aa19.1■□□□□ 0.65
RPUSD4-203ENST00000526942 LTBP4Q8N2S1 1624 aa19.09■□□□□ 0.65
RPUSD4-203ENST00000526942 SOCS7O14512 581 aa19.09■□□□□ 0.65
RPUSD4-203ENST00000526942 ESF1Q9H501 851 aaKnown RBP19.09■□□□□ 0.65
RPUSD4-203ENST00000526942 SPATA31D1Q6ZQQ2 1576 aa19.08■□□□□ 0.64
RPUSD4-203ENST00000526942 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
RPUSD4-203ENST00000526942 KIDINS220Q9ULH0 1771 aa19.07■□□□□ 0.64
RPUSD4-203ENST00000526942 NCOA1Q15788 1441 aa19.07■□□□□ 0.64
RPUSD4-203ENST00000526942 IQSEC2Q5JU85 1478 aa19.06■□□□□ 0.64
RPUSD4-203ENST00000526942 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
RPUSD4-203ENST00000526942 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
RPUSD4-203ENST00000526942 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.64
RPUSD4-203ENST00000526942 NPATQ14207 1427 aa19.02■□□□□ 0.63
RPUSD4-203ENST00000526942 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
RPUSD4-203ENST00000526942 MROH2AA6NES4 1674 aa19.01■□□□□ 0.63
RPUSD4-203ENST00000526942 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
RPUSD4-203ENST00000526942 SYCP2Q9BX26 1530 aa18.97■□□□□ 0.63
RPUSD4-203ENST00000526942 ZMYM3Q14202 1370 aa18.96■□□□□ 0.63
RPUSD4-203ENST00000526942 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
RPUSD4-203ENST00000526942 SPAG9O60271 1321 aaKnown RBP18.94■□□□□ 0.62
RPUSD4-203ENST00000526942 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
RPUSD4-203ENST00000526942 FYCO1Q9BQS8 1478 aa18.94■□□□□ 0.62
RPUSD4-203ENST00000526942 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
RPUSD4-203ENST00000526942 GPATCH8Q9UKJ3 1502 aaKnown RBP18.93■□□□□ 0.62
RPUSD4-203ENST00000526942 ZNF142P52746 1687 aaPredicted RBP18.93■□□□□ 0.62
RPUSD4-203ENST00000526942 ATP7AQ04656 1500 aa18.92■□□□□ 0.62
RPUSD4-203ENST00000526942 PLXNC1O60486 1568 aa18.92■□□□□ 0.62
RPUSD4-203ENST00000526942 MYO3AQ8NEV4 1616 aa18.92■□□□□ 0.62
RPUSD4-203ENST00000526942 CLTCQ00610 1675 aaKnown RBP18.92■□□□□ 0.62
RPUSD4-203ENST00000526942 ZNF335Q9H4Z2 1342 aaPredicted RBP18.92■□□□□ 0.62
RPUSD4-203ENST00000526942 INO80Q9ULG1 1556 aaPredicted RBP18.92■□□□□ 0.62
RPUSD4-203ENST00000526942 PLA2R1Q13018 1463 aa18.91■□□□□ 0.62
RPUSD4-203ENST00000526942 HNRNPMP52272 730 aaKnown RBP eCLIP18.91■□□□□ 0.62
RPUSD4-203ENST00000526942 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
RPUSD4-203ENST00000526942 CEP170BQ9Y4F5 1589 aaPredicted RBP18.9■□□□□ 0.62
RPUSD4-203ENST00000526942 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
RPUSD4-203ENST00000526942 KIAA1107Q9UPP5 1409 aa18.89■□□□□ 0.61
RPUSD4-203ENST00000526942 A2MP01023 1474 aa18.89■□□□□ 0.61
RPUSD4-203ENST00000526942 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
RPUSD4-203ENST00000526942 PKD2Q13563 968 aa18.88■□□□□ 0.61
RPUSD4-203ENST00000526942 PLEKHH2Q8IVE3 1493 aa18.88■□□□□ 0.61
RPUSD4-203ENST00000526942 UBAP1LF5GYI3 381 aa18.87■□□□□ 0.61
RPUSD4-203ENST00000526942 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
RPUSD4-203ENST00000526942 GGT6Q6P531 493 aa18.83■□□□□ 0.61
RPUSD4-203ENST00000526942 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
RPUSD4-203ENST00000526942 ADGBQ8N7X0 1667 aa18.81■□□□□ 0.6
RPUSD4-203ENST00000526942 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
RPUSD4-203ENST00000526942 A2ML1A8K2U0 1454 aa18.8■□□□□ 0.6
RPUSD4-203ENST00000526942 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
RPUSD4-203ENST00000526942 MTUS2Q5JR59 1369 aa18.77■□□□□ 0.6
RPUSD4-203ENST00000526942 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
RPUSD4-203ENST00000526942 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
RPUSD4-203ENST00000526942 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
RPUSD4-203ENST00000526942 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
RPUSD4-203ENST00000526942 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
RPUSD4-203ENST00000526942 POLR1AO95602 1720 aaPredicted RBP18.73■□□□□ 0.59
RPUSD4-203ENST00000526942 DHX29Q7Z478 1369 aaKnown RBP18.72■□□□□ 0.59
RPUSD4-203ENST00000526942 CPS1P31327 1500 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms