RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
CTNND1-213ENST00000526357 CEP89Q96ST8 783 aa11.88□□□□□ -0.51
CTNND1-213ENST00000526357 SETQ01105 290 aaPredicted RBP11.87□□□□□ -0.51
CTNND1-213ENST00000526357 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
CTNND1-213ENST00000526357 B4GALNT3Q6L9W6 998 aa11.86□□□□□ -0.51
CTNND1-213ENST00000526357 HSP90B1P14625 803 aaKnown RBP11.86□□□□□ -0.51
CTNND1-213ENST00000526357 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
CTNND1-213ENST00000526357 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
CTNND1-213ENST00000526357 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
CTNND1-213ENST00000526357 KANK1Q14678 1352 aa11.84□□□□□ -0.51
CTNND1-213ENST00000526357 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
CTNND1-213ENST00000526357 TPM3P06753 285 aa11.84□□□□□ -0.51
CTNND1-213ENST00000526357 RWDD1Q9H446 243 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-213ENST00000526357 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
CTNND1-213ENST00000526357 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
CTNND1-213ENST00000526357 PDE4CQ08493 712 aa11.83□□□□□ -0.52
CTNND1-213ENST00000526357 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
CTNND1-213ENST00000526357 APBB1O00213 710 aa11.81□□□□□ -0.52
CTNND1-213ENST00000526357 GOLGA6L3A6NEY3 463 aa11.81□□□□□ -0.52
CTNND1-213ENST00000526357 ARID3AQ99856 593 aa11.81□□□□□ -0.52
CTNND1-213ENST00000526357 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
CTNND1-213ENST00000526357 HDGFL2Q7Z4V5 671 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-213ENST00000526357 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
CTNND1-213ENST00000526357 SOX12O15370 315 aa11.8□□□□□ -0.52
CTNND1-213ENST00000526357 PHF14O94880 888 aa11.8□□□□□ -0.52
CTNND1-213ENST00000526357 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
CTNND1-213ENST00000526357 CREBRFQ8IUR6 639 aa11.78□□□□□ -0.52
CTNND1-213ENST00000526357 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
CTNND1-213ENST00000526357 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
CTNND1-213ENST00000526357 TAF7LQ5H9L4 462 aa11.77□□□□□ -0.52
CTNND1-213ENST00000526357 TCERG1O14776 1098 aaKnown RBP11.77□□□□□ -0.52
CTNND1-213ENST00000526357 G3V3G9 751 aa11.77□□□□□ -0.53
CTNND1-213ENST00000526357 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
CTNND1-213ENST00000526357 MARCH6O60337 910 aa11.76□□□□□ -0.53
CTNND1-213ENST00000526357 EEA1Q15075 1411 aa11.76□□□□□ -0.53
CTNND1-213ENST00000526357 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
CTNND1-213ENST00000526357 KIF3AQ9Y496 699 aa11.76□□□□□ -0.53
CTNND1-213ENST00000526357 ZNF330Q9Y3S2 320 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-213ENST00000526357 KTN1Q86UP2 1357 aaKnown RBP11.76□□□□□ -0.53
CTNND1-213ENST00000526357 HMMRO75330 724 aa11.76□□□□□ -0.53
CTNND1-213ENST00000526357 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
CTNND1-213ENST00000526357 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
CTNND1-213ENST00000526357 STK31Q9BXU1 1019 aa11.75□□□□□ -0.53
CTNND1-213ENST00000526357 TPM2P07951 284 aa11.75□□□□□ -0.53
CTNND1-213ENST00000526357 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
CTNND1-213ENST00000526357 CCER2I3L3R5 266 aa11.74□□□□□ -0.53
CTNND1-213ENST00000526357 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
CTNND1-213ENST00000526357 CALRP27797 417 aaKnown RBP11.74□□□□□ -0.53
CTNND1-213ENST00000526357 CHMP3Q9Y3E7 222 aa11.74□□□□□ -0.53
CTNND1-213ENST00000526357 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
CTNND1-213ENST00000526357 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
CTNND1-213ENST00000526357 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
CTNND1-213ENST00000526357 GPS2Q13227 327 aa11.73□□□□□ -0.53
CTNND1-213ENST00000526357 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
CTNND1-213ENST00000526357 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
CTNND1-213ENST00000526357 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
CTNND1-213ENST00000526357 SF3A1Q15459 793 aaKnown RBP11.72□□□□□ -0.53
CTNND1-213ENST00000526357 KIF16BQ96L93 1317 aa11.72□□□□□ -0.53
CTNND1-213ENST00000526357 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
CTNND1-213ENST00000526357 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
CTNND1-213ENST00000526357 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
CTNND1-213ENST00000526357 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
CTNND1-213ENST00000526357 TPM1P09493 284 aa11.71□□□□□ -0.53
CTNND1-213ENST00000526357 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.54
CTNND1-213ENST00000526357 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.54
CTNND1-213ENST00000526357 ST18O60284 1047 aa11.7□□□□□ -0.54
CTNND1-213ENST00000526357 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
CTNND1-213ENST00000526357 PES1O00541 588 aaKnown RBP11.7□□□□□ -0.54
CTNND1-213ENST00000526357 U2AF1L5P0DN76 240 aaPredicted RBP11.69□□□□□ -0.54
CTNND1-213ENST00000526357 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.542e-10■■□□□ 12.3
CTNND1-213ENST00000526357 TOMM22Q9NS69 142 aa11.69□□□□□ -0.54
CTNND1-213ENST00000526357 SAFB2Q14151 953 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTNND1-213ENST00000526357 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
CTNND1-213ENST00000526357 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
CTNND1-213ENST00000526357 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
CTNND1-213ENST00000526357 RALBP1Q15311 655 aa11.68□□□□□ -0.54
CTNND1-213ENST00000526357 H3BQV1 296 aa11.67□□□□□ -0.54
CTNND1-213ENST00000526357 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
CTNND1-213ENST00000526357 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
CTNND1-213ENST00000526357 FRAT2O75474 233 aaPredicted RBP11.67□□□□□ -0.54
CTNND1-213ENST00000526357 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
CTNND1-213ENST00000526357 MLECQ14165 292 aa11.66□□□□□ -0.54
CTNND1-213ENST00000526357 SMC4Q9NTJ3 1288 aa11.66□□□□□ -0.54
CTNND1-213ENST00000526357 STK26Q9P289 416 aa11.66□□□□□ -0.54
CTNND1-213ENST00000526357 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
CTNND1-213ENST00000526357 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
CTNND1-213ENST00000526357 CCAR2Q8N163 923 aaKnown RBP11.66□□□□□ -0.54
CTNND1-213ENST00000526357 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
CTNND1-213ENST00000526357 NOL8Q76FK4 1167 aaKnown RBP11.66□□□□□ -0.54
CTNND1-213ENST00000526357 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
CTNND1-213ENST00000526357 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
CTNND1-213ENST00000526357 ATP6V1DQ9Y5K8 247 aa11.65□□□□□ -0.54
CTNND1-213ENST00000526357 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
CTNND1-213ENST00000526357 KIF27Q86VH2 1401 aa11.65□□□□□ -0.55
CTNND1-213ENST00000526357 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
CTNND1-213ENST00000526357 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
CTNND1-213ENST00000526357 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
CTNND1-213ENST00000526357 CCDC47Q96A33 483 aaKnown RBP11.64□□□□□ -0.55
CTNND1-213ENST00000526357 IPO9Q96P70 1041 aaKnown RBP11.64□□□□□ -0.55
CTNND1-213ENST00000526357 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms