RNA–Protein interactions for RNA: ENST00000525933.1

RPS3-205, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-205ENST00000525933 SPATA31D1Q6ZQQ2 1576 aa17.92■□□□□ 0.46
RPS3-205ENST00000525933 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
RPS3-205ENST00000525933 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
RPS3-205ENST00000525933 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
RPS3-205ENST00000525933 NUP153P49790 1475 aaKnown RBP17.89■□□□□ 0.45
RPS3-205ENST00000525933 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
RPS3-205ENST00000525933 HECW1Q76N89 1606 aa17.88■□□□□ 0.45
RPS3-205ENST00000525933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.454e-23■□□□□ 10.1
RPS3-205ENST00000525933 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
RPS3-205ENST00000525933 ARHGEF12Q9NZN5 1544 aa17.84■□□□□ 0.45
RPS3-205ENST00000525933 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
RPS3-205ENST00000525933 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
RPS3-205ENST00000525933 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
RPS3-205ENST00000525933 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
RPS3-205ENST00000525933 ATP10AO60312 1499 aa17.77■□□□□ 0.43
RPS3-205ENST00000525933 RANGAP1P46060 587 aaPredicted RBP17.76■□□□□ 0.43
RPS3-205ENST00000525933 SCAPERQ9BY12 1400 aa17.76■□□□□ 0.43
RPS3-205ENST00000525933 LTBP4Q8N2S1 1624 aa17.74■□□□□ 0.43
RPS3-205ENST00000525933 C9orf84Q5VXU9 1444 aa17.74■□□□□ 0.43
RPS3-205ENST00000525933 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
RPS3-205ENST00000525933 C3P01024 1663 aa17.73■□□□□ 0.43
RPS3-205ENST00000525933 PTPRTO14522 1441 aa17.72■□□□□ 0.43
RPS3-205ENST00000525933 PLCH2O75038 1416 aa17.7■□□□□ 0.42
RPS3-205ENST00000525933 MYO5CQ9NQX4 1742 aa17.7■□□□□ 0.42
RPS3-205ENST00000525933 CDK13Q14004 1512 aaKnown RBP17.69■□□□□ 0.42
RPS3-205ENST00000525933 IQSEC2Q5JU85 1478 aa17.65■□□□□ 0.42
RPS3-205ENST00000525933 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
RPS3-205ENST00000525933 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
RPS3-205ENST00000525933 KDM5CP41229 1560 aa17.61■□□□□ 0.41
RPS3-205ENST00000525933 MSH5O43196 834 aa17.61■□□□□ 0.41
RPS3-205ENST00000525933 EFCAB2Q5VUJ9 269 aa17.61■□□□□ 0.41
RPS3-205ENST00000525933 AFAP1Q8N556 730 aa17.61■□□□□ 0.41
RPS3-205ENST00000525933 KIF14Q15058 1648 aa17.61■□□□□ 0.41
RPS3-205ENST00000525933 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
RPS3-205ENST00000525933 NCOA1Q15788 1441 aa17.6■□□□□ 0.41
RPS3-205ENST00000525933 ZNF518AQ6AHZ1 1483 aa17.59■□□□□ 0.41
RPS3-205ENST00000525933 REREQ9P2R6 1566 aa17.58■□□□□ 0.41
RPS3-205ENST00000525933 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
RPS3-205ENST00000525933 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
RPS3-205ENST00000525933 CAMSAP1Q5T5Y3 1602 aa17.57■□□□□ 0.4
RPS3-205ENST00000525933 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
RPS3-205ENST00000525933 ARHGAP5Q13017 1502 aa17.55■□□□□ 0.4
RPS3-205ENST00000525933 UBAP1LF5GYI3 381 aa17.54■□□□□ 0.4
RPS3-205ENST00000525933 ZNF335Q9H4Z2 1342 aaPredicted RBP17.54■□□□□ 0.4
RPS3-205ENST00000525933 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.4
RPS3-205ENST00000525933 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
RPS3-205ENST00000525933 NCKAP5LQ9HCH0 1330 aa17.52■□□□□ 0.4
RPS3-205ENST00000525933 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.39
RPS3-205ENST00000525933 AGLP35573 1532 aa17.51■□□□□ 0.39
RPS3-205ENST00000525933 ESF1Q9H501 851 aaKnown RBP17.51■□□□□ 0.39
RPS3-205ENST00000525933 KIDINS220Q9ULH0 1771 aa17.5■□□□□ 0.39
RPS3-205ENST00000525933 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
RPS3-205ENST00000525933 ITSN2Q9NZM3 1697 aa17.49■□□□□ 0.39
RPS3-205ENST00000525933 MROH2AA6NES4 1674 aa17.48■□□□□ 0.39
RPS3-205ENST00000525933 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
RPS3-205ENST00000525933 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
RPS3-205ENST00000525933 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
RPS3-205ENST00000525933 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
RPS3-205ENST00000525933 ABCC1P33527 1531 aa17.44■□□□□ 0.38
RPS3-205ENST00000525933 PREX2Q70Z35 1606 aa17.43■□□□□ 0.38
RPS3-205ENST00000525933 MYO3AQ8NEV4 1616 aa17.43■□□□□ 0.38
RPS3-205ENST00000525933 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
RPS3-205ENST00000525933 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
RPS3-205ENST00000525933 NPATQ14207 1427 aa17.43■□□□□ 0.38
RPS3-205ENST00000525933 HSPA1LP34931 641 aa17.42■□□□□ 0.38
RPS3-205ENST00000525933 ZMYM3Q14202 1370 aa17.41■□□□□ 0.38
RPS3-205ENST00000525933 EEA1Q15075 1411 aa17.4■□□□□ 0.38
RPS3-205ENST00000525933 CDC42BPAQ5VT25 1732 aa17.4■□□□□ 0.38
RPS3-205ENST00000525933 FMN1Q68DA7 1419 aa17.39■□□□□ 0.37
RPS3-205ENST00000525933 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
RPS3-205ENST00000525933 CEP170BQ9Y4F5 1589 aaPredicted RBP17.39■□□□□ 0.37
RPS3-205ENST00000525933 TCOF1Q13428 1488 aaKnown RBP17.38■□□□□ 0.37
RPS3-205ENST00000525933 CLIP1P30622 1438 aa17.38■□□□□ 0.37
RPS3-205ENST00000525933 PIP4K2BP78356 416 aa17.38■□□□□ 0.37
RPS3-205ENST00000525933 PKD2Q13563 968 aa17.38■□□□□ 0.37
RPS3-205ENST00000525933 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
RPS3-205ENST00000525933 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
RPS3-205ENST00000525933 SAMD9LQ8IVG5 1584 aa17.36■□□□□ 0.37
RPS3-205ENST00000525933 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
RPS3-205ENST00000525933 PTPRKQ15262 1439 aa17.33■□□□□ 0.37
RPS3-205ENST00000525933 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.36
RPS3-205ENST00000525933 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
RPS3-205ENST00000525933 TOM1O60784 492 aa17.28■□□□□ 0.36
RPS3-205ENST00000525933 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
RPS3-205ENST00000525933 SYCP2Q9BX26 1530 aa17.28■□□□□ 0.36
RPS3-205ENST00000525933 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
RPS3-205ENST00000525933 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
RPS3-205ENST00000525933 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
RPS3-205ENST00000525933 ZNF777Q9ULD5 760 aaPredicted RBP17.27■□□□□ 0.36
RPS3-205ENST00000525933 CPS1P31327 1500 aa17.26■□□□□ 0.35
RPS3-205ENST00000525933 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.355e-7■□□□□ 10
RPS3-205ENST00000525933 SPAG9O60271 1321 aaKnown RBP17.26■□□□□ 0.35
RPS3-205ENST00000525933 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
RPS3-205ENST00000525933 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
RPS3-205ENST00000525933 GGT6Q6P531 493 aa17.25■□□□□ 0.35
RPS3-205ENST00000525933 A2ML1A8K2U0 1454 aa17.25■□□□□ 0.35
RPS3-205ENST00000525933 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
RPS3-205ENST00000525933 A2MP01023 1474 aa17.24■□□□□ 0.35
RPS3-205ENST00000525933 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
RPS3-205ENST00000525933 ADGBQ8N7X0 1667 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms