RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
ATM-208ENST00000525537 PYGBP11216 843 aa11.83□□□□□ -0.52
ATM-208ENST00000525537 ARXQ96QS3 562 aa11.83□□□□□ -0.52
ATM-208ENST00000525537 WDR70Q9NW82 654 aa11.81□□□□□ -0.52
ATM-208ENST00000525537 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
ATM-208ENST00000525537 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
ATM-208ENST00000525537 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
ATM-208ENST00000525537 EMP3P54852 163 aa11.79□□□□□ -0.52
ATM-208ENST00000525537 LMOD2Q6P5Q4 547 aa11.79□□□□□ -0.52
ATM-208ENST00000525537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
ATM-208ENST00000525537 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
ATM-208ENST00000525537 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
ATM-208ENST00000525537 CADPS2Q86UW7 1296 aa11.76□□□□□ -0.53
ATM-208ENST00000525537 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
ATM-208ENST00000525537 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
ATM-208ENST00000525537 ZNF467Q7Z7K2 595 aaPredicted RBP11.72□□□□□ -0.53
ATM-208ENST00000525537 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
ATM-208ENST00000525537 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
ATM-208ENST00000525537 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
ATM-208ENST00000525537 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
ATM-208ENST00000525537 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
ATM-208ENST00000525537 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
ATM-208ENST00000525537 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
ATM-208ENST00000525537 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
ATM-208ENST00000525537 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
ATM-208ENST00000525537 MKRN3Q13064 507 aaKnown RBP11.6□□□□□ -0.55
ATM-208ENST00000525537 ZC3H15Q8WU90 426 aaKnown RBP11.6□□□□□ -0.55
ATM-208ENST00000525537 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
ATM-208ENST00000525537 HOMEZQ8IX15 550 aa11.58□□□□□ -0.56
ATM-208ENST00000525537 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
ATM-208ENST00000525537 E2F4Q16254 413 aa11.56□□□□□ -0.56
ATM-208ENST00000525537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.568e-8■■■■□ 20.8
ATM-208ENST00000525537 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
ATM-208ENST00000525537 PSEN1P49768 467 aa11.55□□□□□ -0.56
ATM-208ENST00000525537 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
ATM-208ENST00000525537 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
ATM-208ENST00000525537 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
ATM-208ENST00000525537 SEMA3EO15041 775 aa11.51□□□□□ -0.57
ATM-208ENST00000525537 PPP1R37O75864 691 aa11.5□□□□□ -0.57
ATM-208ENST00000525537 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
ATM-208ENST00000525537 NLRP6P59044 892 aa11.49□□□□□ -0.57
ATM-208ENST00000525537 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
ATM-208ENST00000525537 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
ATM-208ENST00000525537 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
ATM-208ENST00000525537 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
ATM-208ENST00000525537 SOX12O15370 315 aa11.46□□□□□ -0.57
ATM-208ENST00000525537 ZMYND10O75800 440 aa11.44□□□□□ -0.58
ATM-208ENST00000525537 SMYD5Q6GMV2 418 aa11.44□□□□□ -0.58
ATM-208ENST00000525537 EFCAB3Q8N7B9 438 aa11.44□□□□□ -0.58
ATM-208ENST00000525537 ERBB3P21860 1342 aa11.43□□□□□ -0.58
ATM-208ENST00000525537 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
ATM-208ENST00000525537 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
ATM-208ENST00000525537 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
ATM-208ENST00000525537 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
ATM-208ENST00000525537 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
ATM-208ENST00000525537 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
ATM-208ENST00000525537 NCKAP5LQ9HCH0 1330 aa11.39□□□□□ -0.59
ATM-208ENST00000525537 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
ATM-208ENST00000525537 PDE4AP27815 886 aa11.38□□□□□ -0.59
ATM-208ENST00000525537 MFSD10Q14728 455 aa11.38□□□□□ -0.59
ATM-208ENST00000525537 G3V3G9 751 aa11.37□□□□□ -0.59
ATM-208ENST00000525537 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
ATM-208ENST00000525537 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
ATM-208ENST00000525537 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
ATM-208ENST00000525537 SUPT5HO00267 1087 aaKnown RBP11.34□□□□□ -0.59
ATM-208ENST00000525537 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
ATM-208ENST00000525537 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
ATM-208ENST00000525537 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
ATM-208ENST00000525537 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
ATM-208ENST00000525537 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
ATM-208ENST00000525537 AK7Q96M32 723 aa11.29□□□□□ -0.6
ATM-208ENST00000525537 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
ATM-208ENST00000525537 PTGER2P43116 358 aa11.26□□□□□ -0.61
ATM-208ENST00000525537 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
ATM-208ENST00000525537 ZSWIM6Q9HCJ5 1215 aa11.24□□□□□ -0.61
ATM-208ENST00000525537 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
ATM-208ENST00000525537 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
ATM-208ENST00000525537 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
ATM-208ENST00000525537 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
ATM-208ENST00000525537 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
ATM-208ENST00000525537 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
ATM-208ENST00000525537 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
ATM-208ENST00000525537 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
ATM-208ENST00000525537 ANKRD13DQ6ZTN6 518 aa11.15□□□□□ -0.62
ATM-208ENST00000525537 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
ATM-208ENST00000525537 TRIM66O15016 1216 aa11.14□□□□□ -0.63
ATM-208ENST00000525537 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
ATM-208ENST00000525537 PDE4DQ08499 809 aa11.13□□□□□ -0.63
ATM-208ENST00000525537 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
ATM-208ENST00000525537 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
ATM-208ENST00000525537 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
ATM-208ENST00000525537 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
ATM-208ENST00000525537 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
ATM-208ENST00000525537 PDIA6Q15084 440 aa11.09□□□□□ -0.63
ATM-208ENST00000525537 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
ATM-208ENST00000525537 DPYSL4O14531 572 aa11.07□□□□□ -0.64
ATM-208ENST00000525537 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
ATM-208ENST00000525537 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
ATM-208ENST00000525537 UBTFP17480 764 aaKnown RBP11.05□□□□□ -0.64
ATM-208ENST00000525537 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms