RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 KDM5BQ9UGL1 1544 aa23.4■■□□□ 1.34
CCDC90B-203ENST00000525503 MPHOSPH9Q99550 1183 aa23.39■■□□□ 1.34
CCDC90B-203ENST00000525503 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
CCDC90B-203ENST00000525503 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
CCDC90B-203ENST00000525503 ITSN2Q9NZM3 1697 aa23.37■■□□□ 1.33
CCDC90B-203ENST00000525503 ADCY10Q96PN6 1610 aa23.36■■□□□ 1.33
CCDC90B-203ENST00000525503 ZNF644Q9H582 1327 aaPredicted RBP23.34■■□□□ 1.33
CCDC90B-203ENST00000525503 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
CCDC90B-203ENST00000525503 CFDP1Q9UEE9 299 aaPredicted RBP23.33■■□□□ 1.32
CCDC90B-203ENST00000525503 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
CCDC90B-203ENST00000525503 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
CCDC90B-203ENST00000525503 CCER2I3L3R5 266 aa23.29■■□□□ 1.32
CCDC90B-203ENST00000525503 ANP32CO43423 234 aa23.29■■□□□ 1.32
CCDC90B-203ENST00000525503 ABCA8O94911 1581 aa23.29■■□□□ 1.32
CCDC90B-203ENST00000525503 KIF14Q15058 1648 aa23.27■■□□□ 1.32
CCDC90B-203ENST00000525503 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
CCDC90B-203ENST00000525503 ANKRD30BQ9BXX2 1392 aa23.25■■□□□ 1.31
CCDC90B-203ENST00000525503 ADGBQ8N7X0 1667 aa23.25■■□□□ 1.31
CCDC90B-203ENST00000525503 ADGRL2O95490 1459 aa23.24■■□□□ 1.31
CCDC90B-203ENST00000525503 PLEKHD1A6NEE1 506 aa23.24■■□□□ 1.31
CCDC90B-203ENST00000525503 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
CCDC90B-203ENST00000525503 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
CCDC90B-203ENST00000525503 SLC4A1APQ9BWU0 796 aaKnown RBP23.21■■□□□ 1.31
CCDC90B-203ENST00000525503 ATP10BO94823 1461 aa23.2■■□□□ 1.31
CCDC90B-203ENST00000525503 L3MBTL2Q969R5 705 aa23.2■■□□□ 1.3
CCDC90B-203ENST00000525503 CROCC2H7BZ55 1655 aa23.2■■□□□ 1.3
CCDC90B-203ENST00000525503 FOXD1Q16676 465 aa23.19■■□□□ 1.3
CCDC90B-203ENST00000525503 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
CCDC90B-203ENST00000525503 ANKRD30AQ9BXX3 1397 aa23.18■■□□□ 1.3
CCDC90B-203ENST00000525503 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC90B-203ENST00000525503 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
CCDC90B-203ENST00000525503 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
CCDC90B-203ENST00000525503 PZPP20742 1482 aa23.15■■□□□ 1.3
CCDC90B-203ENST00000525503 PTPRGP23470 1445 aa23.14■■□□□ 1.3
CCDC90B-203ENST00000525503 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.3
CCDC90B-203ENST00000525503 TEX14Q8IWB6 1497 aa23.13■■□□□ 1.29
CCDC90B-203ENST00000525503 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
CCDC90B-203ENST00000525503 SUPT16HQ9Y5B9 1047 aaKnown RBP23.12■■□□□ 1.29
CCDC90B-203ENST00000525503 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
CCDC90B-203ENST00000525503 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
CCDC90B-203ENST00000525503 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.29
CCDC90B-203ENST00000525503 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
CCDC90B-203ENST00000525503 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
CCDC90B-203ENST00000525503 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
CCDC90B-203ENST00000525503 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
CCDC90B-203ENST00000525503 NBPF8Q3BBV2 869 aa23.03■■□□□ 1.28
CCDC90B-203ENST00000525503 CHD1O14646 1710 aa23.01■■□□□ 1.27
CCDC90B-203ENST00000525503 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
CCDC90B-203ENST00000525503 PKD2Q13563 968 aa23■■□□□ 1.27
CCDC90B-203ENST00000525503 SHROOM2Q13796 1616 aa23■■□□□ 1.27
CCDC90B-203ENST00000525503 CCDC7Q96M83 1385 aa22.99■■□□□ 1.27
CCDC90B-203ENST00000525503 KDM5DQ9BY66 1539 aa22.98■■□□□ 1.27
CCDC90B-203ENST00000525503 MBD5Q9P267 1494 aa22.98■■□□□ 1.27
CCDC90B-203ENST00000525503 RSPH4AQ5TD94 716 aa22.97■■□□□ 1.27
CCDC90B-203ENST00000525503 SPATA31E1Q6ZUB1 1445 aa22.96■■□□□ 1.27
CCDC90B-203ENST00000525503 NUP155O75694 1391 aa22.96■■□□□ 1.27
CCDC90B-203ENST00000525503 PREX2Q70Z35 1606 aa22.95■■□□□ 1.27
CCDC90B-203ENST00000525503 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
CCDC90B-203ENST00000525503 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.26
CCDC90B-203ENST00000525503 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCDC90B-203ENST00000525503 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
CCDC90B-203ENST00000525503 C11orf95C9JLR9 678 aaPredicted RBP22.9■■□□□ 1.26
CCDC90B-203ENST00000525503 CDC42BPBQ9Y5S2 1711 aa22.89■■□□□ 1.26
CCDC90B-203ENST00000525503 ABCC2Q92887 1545 aa22.89■■□□□ 1.25
CCDC90B-203ENST00000525503 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
CCDC90B-203ENST00000525503 ARHGEF12Q9NZN5 1544 aa22.86■■□□□ 1.25
CCDC90B-203ENST00000525503 UHRF1BP1Q6BDS2 1440 aa22.86■■□□□ 1.25
CCDC90B-203ENST00000525503 KIF7Q2M1P5 1343 aa22.86■■□□□ 1.25
CCDC90B-203ENST00000525503 NEFLP07196 543 aa22.84■■□□□ 1.25
CCDC90B-203ENST00000525503 MAST1Q9Y2H9 1570 aa22.84■■□□□ 1.25
CCDC90B-203ENST00000525503 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
CCDC90B-203ENST00000525503 ARHGAP5Q13017 1502 aa22.84■■□□□ 1.25
CCDC90B-203ENST00000525503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.83■■□□□ 1.25
CCDC90B-203ENST00000525503 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.24
CCDC90B-203ENST00000525503 PRKRIP1Q9H875 184 aaPredicted RBP22.82■■□□□ 1.24
CCDC90B-203ENST00000525503 USP47Q96K76 1375 aa22.82■■□□□ 1.24
CCDC90B-203ENST00000525503 FKBP8Q14318 412 aa22.81■■□□□ 1.24
CCDC90B-203ENST00000525503 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
CCDC90B-203ENST00000525503 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
CCDC90B-203ENST00000525503 RALGAPBQ86X10 1494 aa22.8■■□□□ 1.24
CCDC90B-203ENST00000525503 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
CCDC90B-203ENST00000525503 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC90B-203ENST00000525503 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
CCDC90B-203ENST00000525503 FAM135AQ9P2D6 1515 aa22.78■■□□□ 1.24
CCDC90B-203ENST00000525503 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.24
CCDC90B-203ENST00000525503 KDM5CP41229 1560 aa22.77■■□□□ 1.24
CCDC90B-203ENST00000525503 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
CCDC90B-203ENST00000525503 UHRF1BP1LA0JNW5 1464 aa22.76■■□□□ 1.23
CCDC90B-203ENST00000525503 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
CCDC90B-203ENST00000525503 UNC13BO14795 1591 aa22.74■■□□□ 1.23
CCDC90B-203ENST00000525503 PLCH2O75038 1416 aa22.7■■□□□ 1.22
CCDC90B-203ENST00000525503 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
CCDC90B-203ENST00000525503 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
CCDC90B-203ENST00000525503 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
CCDC90B-203ENST00000525503 BCORL1Q5H9F3 1711 aa22.69■■□□□ 1.22
CCDC90B-203ENST00000525503 ZCCHC11Q5TAX3 1644 aaKnown RBP22.69■■□□□ 1.22
CCDC90B-203ENST00000525503 DUOX2Q9NRD8 1548 aa22.68■■□□□ 1.22
CCDC90B-203ENST00000525503 CCDC144AA2RUR9 1427 aa22.68■■□□□ 1.22
CCDC90B-203ENST00000525503 CCDC184Q52MB2 194 aa22.67■■□□□ 1.22
CCDC90B-203ENST00000525503 EFCAB2Q5VUJ9 269 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms