RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MLECQ14165 292 aa15.82■□□□□ 0.12
PTPN12-216ENST00000523952 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
PTPN12-216ENST00000523952 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
PTPN12-216ENST00000523952 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
PTPN12-216ENST00000523952 DISP3Q9P2K9 1392 aa15.81■□□□□ 0.12
PTPN12-216ENST00000523952 SETD1BQ9UPS6 1966 aaKnown RBP15.8■□□□□ 0.12
PTPN12-216ENST00000523952 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
PTPN12-216ENST00000523952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTPN12-216ENST00000523952 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
PTPN12-216ENST00000523952 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
PTPN12-216ENST00000523952 STRCQ7RTU9 1775 aa15.77■□□□□ 0.11
PTPN12-216ENST00000523952 YEATS2Q9ULM3 1422 aa15.76■□□□□ 0.11
PTPN12-216ENST00000523952 SPATA31D1Q6ZQQ2 1576 aa15.75■□□□□ 0.11
PTPN12-216ENST00000523952 DMRT2Q9Y5R5 561 aa15.73■□□□□ 0.11
PTPN12-216ENST00000523952 SOCS7O14512 581 aa15.72■□□□□ 0.11
PTPN12-216ENST00000523952 ARHGEF12Q9NZN5 1544 aa15.71■□□□□ 0.11
PTPN12-216ENST00000523952 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
PTPN12-216ENST00000523952 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
PTPN12-216ENST00000523952 ATP10AO60312 1499 aa15.7■□□□□ 0.1
PTPN12-216ENST00000523952 C9orf84Q5VXU9 1444 aa15.69■□□□□ 0.1
PTPN12-216ENST00000523952 ILDR2Q71H61 639 aa15.69■□□□□ 0.1
PTPN12-216ENST00000523952 C3P01024 1663 aa15.69■□□□□ 0.1
PTPN12-216ENST00000523952 MYT1LQ9UL68 1186 aa15.68■□□□□ 0.1
PTPN12-216ENST00000523952 SUPT6HQ7KZ85 1726 aaKnown RBP15.68■□□□□ 0.1
PTPN12-216ENST00000523952 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
PTPN12-216ENST00000523952 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
PTPN12-216ENST00000523952 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
PTPN12-216ENST00000523952 KIF14Q15058 1648 aa15.65■□□□□ 0.1
PTPN12-216ENST00000523952 PLCH2O75038 1416 aa15.64■□□□□ 0.09
PTPN12-216ENST00000523952 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
PTPN12-216ENST00000523952 ESF1Q9H501 851 aaKnown RBP15.63■□□□□ 0.09
PTPN12-216ENST00000523952 EFCAB2Q5VUJ9 269 aa15.62■□□□□ 0.09
PTPN12-216ENST00000523952 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
PTPN12-216ENST00000523952 ARHGAP5Q13017 1502 aa15.62■□□□□ 0.09
PTPN12-216ENST00000523952 EEA1Q15075 1411 aa15.6■□□□□ 0.09
PTPN12-216ENST00000523952 CDC42BPBQ9Y5S2 1711 aa15.6■□□□□ 0.09
PTPN12-216ENST00000523952 DIP2CQ9Y2E4 1556 aa15.59■□□□□ 0.09
PTPN12-216ENST00000523952 ABCA6Q8N139 1617 aa15.58■□□□□ 0.09
PTPN12-216ENST00000523952 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
PTPN12-216ENST00000523952 PTPRTO14522 1441 aa15.58■□□□□ 0.08
PTPN12-216ENST00000523952 KDM5CP41229 1560 aa15.58■□□□□ 0.08
PTPN12-216ENST00000523952 REREQ9P2R6 1566 aa15.56■□□□□ 0.08
PTPN12-216ENST00000523952 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
PTPN12-216ENST00000523952 LRRIQ1Q96JM4 1722 aa15.56■□□□□ 0.08
PTPN12-216ENST00000523952 IQSEC2Q5JU85 1478 aa15.54■□□□□ 0.08
PTPN12-216ENST00000523952 CLIP1P30622 1438 aa15.54■□□□□ 0.08
PTPN12-216ENST00000523952 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
PTPN12-216ENST00000523952 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
PTPN12-216ENST00000523952 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
PTPN12-216ENST00000523952 LTBP4Q8N2S1 1624 aa15.53■□□□□ 0.08
PTPN12-216ENST00000523952 AFAP1Q8N556 730 aa15.52■□□□□ 0.08
PTPN12-216ENST00000523952 CAMSAP1Q5T5Y3 1602 aa15.5■□□□□ 0.07
PTPN12-216ENST00000523952 KIDINS220Q9ULH0 1771 aa15.5■□□□□ 0.07
PTPN12-216ENST00000523952 TRAPPC8Q9Y2L5 1435 aa15.5■□□□□ 0.07
PTPN12-216ENST00000523952 AGLP35573 1532 aa15.49■□□□□ 0.07
PTPN12-216ENST00000523952 CDC42BPAQ5VT25 1732 aa15.49■□□□□ 0.07
PTPN12-216ENST00000523952 MAPK8IP2Q13387 824 aaPredicted RBP15.49■□□□□ 0.07
PTPN12-216ENST00000523952 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
PTPN12-216ENST00000523952 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
PTPN12-216ENST00000523952 CNTLNQ9NXG0 1405 aa15.48■□□□□ 0.07
PTPN12-216ENST00000523952 MLH3Q9UHC1 1453 aa15.47■□□□□ 0.07
PTPN12-216ENST00000523952 NCOA1Q15788 1441 aa15.47■□□□□ 0.07
PTPN12-216ENST00000523952 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
PTPN12-216ENST00000523952 ABCC1P33527 1531 aa15.47■□□□□ 0.07
PTPN12-216ENST00000523952 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
PTPN12-216ENST00000523952 ZNF142P52746 1687 aaPredicted RBP15.46■□□□□ 0.07
PTPN12-216ENST00000523952 MYO3AQ8NEV4 1616 aa15.45■□□□□ 0.06
PTPN12-216ENST00000523952 UBAP1LF5GYI3 381 aa15.44■□□□□ 0.06
PTPN12-216ENST00000523952 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
PTPN12-216ENST00000523952 NPATQ14207 1427 aa15.41■□□□□ 0.06
PTPN12-216ENST00000523952 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
PTPN12-216ENST00000523952 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
PTPN12-216ENST00000523952 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
PTPN12-216ENST00000523952 CEP170BQ9Y4F5 1589 aaPredicted RBP15.38■□□□□ 0.05
PTPN12-216ENST00000523952 CCDC18Q5T9S5 1454 aa15.38■□□□□ 0.05
PTPN12-216ENST00000523952 ZNF335Q9H4Z2 1342 aaPredicted RBP15.38■□□□□ 0.05
PTPN12-216ENST00000523952 SAMD9LQ8IVG5 1584 aa15.37■□□□□ 0.05
PTPN12-216ENST00000523952 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
PTPN12-216ENST00000523952 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
PTPN12-216ENST00000523952 ZNF777Q9ULD5 760 aaPredicted RBP15.36■□□□□ 0.05
PTPN12-216ENST00000523952 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
PTPN12-216ENST00000523952 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
PTPN12-216ENST00000523952 PKD2Q13563 968 aa15.35■□□□□ 0.05
PTPN12-216ENST00000523952 PLA2R1Q13018 1463 aa15.34■□□□□ 0.05
PTPN12-216ENST00000523952 ATP7AQ04656 1500 aa15.34■□□□□ 0.05
PTPN12-216ENST00000523952 MED1Q15648 1581 aaPredicted RBP15.34■□□□□ 0.05
PTPN12-216ENST00000523952 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
PTPN12-216ENST00000523952 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
PTPN12-216ENST00000523952 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
PTPN12-216ENST00000523952 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
PTPN12-216ENST00000523952 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
PTPN12-216ENST00000523952 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
PTPN12-216ENST00000523952 A2MP01023 1474 aa15.28■□□□□ 0.04
PTPN12-216ENST00000523952 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
PTPN12-216ENST00000523952 GGT6Q6P531 493 aa15.28■□□□□ 0.04
PTPN12-216ENST00000523952 TOM1O60784 492 aa15.27■□□□□ 0.04
PTPN12-216ENST00000523952 CPS1P31327 1500 aa15.27■□□□□ 0.03
PTPN12-216ENST00000523952 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.03
PTPN12-216ENST00000523952 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
PTPN12-216ENST00000523952 HNRNPMP52272 730 aaKnown RBP eCLIP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms