RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 IER5LQ5T953 404 aa12.51□□□□□ -0.41
CPS1-211ENST00000523702 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
CPS1-211ENST00000523702 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CPS1-211ENST00000523702 DSG2Q14126 1118 aa12.49□□□□□ -0.41
CPS1-211ENST00000523702 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
CPS1-211ENST00000523702 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
CPS1-211ENST00000523702 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
CPS1-211ENST00000523702 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
CPS1-211ENST00000523702 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
CPS1-211ENST00000523702 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
CPS1-211ENST00000523702 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
CPS1-211ENST00000523702 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
CPS1-211ENST00000523702 PLCG2P16885 1265 aa12.45□□□□□ -0.42
CPS1-211ENST00000523702 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
CPS1-211ENST00000523702 C2orf72A6NCS6 295 aa12.43□□□□□ -0.42
CPS1-211ENST00000523702 TMEM92Q6UXU6 159 aa12.43□□□□□ -0.42
CPS1-211ENST00000523702 KIF3CO14782 793 aa12.42□□□□□ -0.42
CPS1-211ENST00000523702 FOXK1P85037 733 aa12.41□□□□□ -0.42
CPS1-211ENST00000523702 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
CPS1-211ENST00000523702 SEC24BO95487 1268 aa12.39□□□□□ -0.43
CPS1-211ENST00000523702 PLPP6Q8IY26 295 aa12.39□□□□□ -0.43
CPS1-211ENST00000523702 DPYSL4O14531 572 aa12.38□□□□□ -0.43
CPS1-211ENST00000523702 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
CPS1-211ENST00000523702 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
CPS1-211ENST00000523702 G3V3G9 751 aa12.35□□□□□ -0.43
CPS1-211ENST00000523702 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
CPS1-211ENST00000523702 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
CPS1-211ENST00000523702 C7P10643 843 aa12.33□□□□□ -0.44
CPS1-211ENST00000523702 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
CPS1-211ENST00000523702 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
CPS1-211ENST00000523702 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
CPS1-211ENST00000523702 RBM26Q5T8P6 1007 aaKnown RBP12.28□□□□□ -0.44
CPS1-211ENST00000523702 PDIA6Q15084 440 aa12.26□□□□□ -0.45
CPS1-211ENST00000523702 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
CPS1-211ENST00000523702 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPS1-211ENST00000523702 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
CPS1-211ENST00000523702 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
CPS1-211ENST00000523702 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
CPS1-211ENST00000523702 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
CPS1-211ENST00000523702 ZMYND10O75800 440 aa12.2□□□□□ -0.46
CPS1-211ENST00000523702 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
CPS1-211ENST00000523702 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
CPS1-211ENST00000523702 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
CPS1-211ENST00000523702 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
CPS1-211ENST00000523702 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
CPS1-211ENST00000523702 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
CPS1-211ENST00000523702 OSBPP22059 807 aa12.11□□□□□ -0.47
CPS1-211ENST00000523702 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
CPS1-211ENST00000523702 DDX12PQ92771 950 aa12.11□□□□□ -0.47
CPS1-211ENST00000523702 EVI5O60447 810 aa12.1□□□□□ -0.47
CPS1-211ENST00000523702 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
CPS1-211ENST00000523702 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
CPS1-211ENST00000523702 PTGER2P43116 358 aa12.09□□□□□ -0.47
CPS1-211ENST00000523702 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
CPS1-211ENST00000523702 GPR37O15354 613 aa12.08□□□□□ -0.48
CPS1-211ENST00000523702 TBC1D12O60347 775 aa12.08□□□□□ -0.48
CPS1-211ENST00000523702 SLC34A2O95436 690 aa12.06□□□□□ -0.48
CPS1-211ENST00000523702 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
CPS1-211ENST00000523702 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
CPS1-211ENST00000523702 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
CPS1-211ENST00000523702 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
CPS1-211ENST00000523702 PCDHGA4Q9Y5G9 962 aa12□□□□□ -0.49
CPS1-211ENST00000523702 AK7Q96M32 723 aa11.99□□□□□ -0.49
CPS1-211ENST00000523702 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
CPS1-211ENST00000523702 FECHP22830 423 aa11.98□□□□□ -0.49
CPS1-211ENST00000523702 TMEM132AQ24JP5 1023 aa11.97□□□□□ -0.49
CPS1-211ENST00000523702 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.56e-8■■■■■ 28.3
CPS1-211ENST00000523702 TRIM66O15016 1216 aa11.94□□□□□ -0.5
CPS1-211ENST00000523702 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
CPS1-211ENST00000523702 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
CPS1-211ENST00000523702 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
CPS1-211ENST00000523702 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
CPS1-211ENST00000523702 SLAIN1Q8ND83 568 aa11.91□□□□□ -0.5
CPS1-211ENST00000523702 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
CPS1-211ENST00000523702 GNPATO15228 680 aa11.9□□□□□ -0.5
CPS1-211ENST00000523702 PHF14O94880 888 aa11.9□□□□□ -0.5
CPS1-211ENST00000523702 PTGDRQ13258 359 aa11.9□□□□□ -0.5
CPS1-211ENST00000523702 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
CPS1-211ENST00000523702 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
CPS1-211ENST00000523702 FCHSD2O94868 740 aa11.89□□□□□ -0.51
CPS1-211ENST00000523702 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
CPS1-211ENST00000523702 IRF6O14896 467 aa11.88□□□□□ -0.51
CPS1-211ENST00000523702 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
CPS1-211ENST00000523702 PDE4DQ08499 809 aa11.88□□□□□ -0.51
CPS1-211ENST00000523702 TSR1Q2NL82 804 aaKnown RBP11.88□□□□□ -0.51
CPS1-211ENST00000523702 MINK1Q8N4C8 1332 aaPredicted RBP11.87□□□□□ -0.51
CPS1-211ENST00000523702 NUDT7P0C024 238 aa11.87□□□□□ -0.51
CPS1-211ENST00000523702 HIC1Q14526 733 aa11.87□□□□□ -0.51
CPS1-211ENST00000523702 CCDC102AQ96A19 550 aa11.87□□□□□ -0.51
CPS1-211ENST00000523702 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
CPS1-211ENST00000523702 MAP2K5Q13163 448 aa11.86□□□□□ -0.51
CPS1-211ENST00000523702 EPAS1Q99814 870 aa11.86□□□□□ -0.51
CPS1-211ENST00000523702 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
CPS1-211ENST00000523702 MAP3K7O43318 606 aa11.84□□□□□ -0.51
CPS1-211ENST00000523702 FOSBP53539 338 aa11.83□□□□□ -0.52
CPS1-211ENST00000523702 KDM4CQ9H3R0 1056 aa11.83□□□□□ -0.52
CPS1-211ENST00000523702 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
CPS1-211ENST00000523702 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
CPS1-211ENST00000523702 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
CPS1-211ENST00000523702 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms