RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 VARS2Q5ST30 1063 aaKnown RBP14.7□□□□□ -0.06
TVP23C-207ENST00000523573 GPR153Q6NV75 609 aa14.63□□□□□ -0.07
TVP23C-207ENST00000523573 TAOK2Q9UL54 1235 aa14.62□□□□□ -0.07
TVP23C-207ENST00000523573 NLRP6P59044 892 aa14.61□□□□□ -0.07
TVP23C-207ENST00000523573 ZNF687Q8N1G0 1237 aa14.6□□□□□ -0.07
TVP23C-207ENST00000523573 RNF166Q96A37 237 aaPredicted RBP14.58□□□□□ -0.08
TVP23C-207ENST00000523573 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
TVP23C-207ENST00000523573 FBXO22Q8NEZ5 403 aa14.55□□□□□ -0.08
TVP23C-207ENST00000523573 ARSIQ5FYB1 569 aa14.54□□□□□ -0.08
TVP23C-207ENST00000523573 MYT1LQ9UL68 1186 aa14.54□□□□□ -0.08
TVP23C-207ENST00000523573 STK24Q9Y6E0 443 aa14.53□□□□□ -0.08
TVP23C-207ENST00000523573 MFRPQ9BY79 579 aa14.48□□□□□ -0.09
TVP23C-207ENST00000523573 PTGER2P43116 358 aa14.47□□□□□ -0.09
TVP23C-207ENST00000523573 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
TVP23C-207ENST00000523573 STK25O00506 426 aa14.46□□□□□ -0.09
TVP23C-207ENST00000523573 KHSRPQ92945 711 aaKnown RBP eCLIP14.45□□□□□ -0.1
TVP23C-207ENST00000523573 KIF3CO14782 793 aa14.41□□□□□ -0.1
TVP23C-207ENST00000523573 ANKRD13DQ6ZTN6 518 aa14.41□□□□□ -0.1
TVP23C-207ENST00000523573 C2orf72A6NCS6 295 aa14.4□□□□□ -0.1
TVP23C-207ENST00000523573 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
TVP23C-207ENST00000523573 LSM11P83369 360 aaKnown RBP eCLIP14.36□□□□□ -0.11
TVP23C-207ENST00000523573 NUDT7P0C024 238 aa14.34□□□□□ -0.11
TVP23C-207ENST00000523573 SLC34A2O95436 690 aa14.32□□□□□ -0.12
TVP23C-207ENST00000523573 TMC2Q8TDI7 906 aa14.32□□□□□ -0.12
TVP23C-207ENST00000523573 PBX2P40425 430 aa14.31□□□□□ -0.12
TVP23C-207ENST00000523573 PCDHGA4Q9Y5G9 962 aa14.3□□□□□ -0.12
TVP23C-207ENST00000523573 RGL2O15211 777 aa14.28□□□□□ -0.12
TVP23C-207ENST00000523573 LHX6Q9UPM6 363 aa14.28□□□□□ -0.12
TVP23C-207ENST00000523573 PKD2Q13563 968 aa14.26□□□□□ -0.13
TVP23C-207ENST00000523573 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
TVP23C-207ENST00000523573 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
TVP23C-207ENST00000523573 PPP1R37O75864 691 aa14.19□□□□□ -0.14
TVP23C-207ENST00000523573 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
TVP23C-207ENST00000523573 ARHGAP33O14559 1287 aa14.12□□□□□ -0.15
TVP23C-207ENST00000523573 PTCD2Q8WV60 388 aaKnown RBP14.11□□□□□ -0.15
TVP23C-207ENST00000523573 ADGRD1Q6QNK2 874 aa14.1□□□□□ -0.15
TVP23C-207ENST00000523573 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
TVP23C-207ENST00000523573 HCSTQ9UBK5 93 aa14.09□□□□□ -0.15
TVP23C-207ENST00000523573 FOXK1P85037 733 aa14.07□□□□□ -0.16
TVP23C-207ENST00000523573 PLPP6Q8IY26 295 aa14.06□□□□□ -0.16
TVP23C-207ENST00000523573 PLA2G2EQ9NZK7 142 aa14.04□□□□□ -0.16
TVP23C-207ENST00000523573 TK2O00142 265 aa14.03□□□□□ -0.16
TVP23C-207ENST00000523573 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
TVP23C-207ENST00000523573 HS6ST3Q8IZP7 471 aa14.02□□□□□ -0.17
TVP23C-207ENST00000523573 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
TVP23C-207ENST00000523573 TBC1D12O60347 775 aa14□□□□□ -0.17
TVP23C-207ENST00000523573 PSEN2P49810 448 aa14□□□□□ -0.17
TVP23C-207ENST00000523573 DMRTA1Q5VZB9 504 aa13.99□□□□□ -0.17
TVP23C-207ENST00000523573 DSG2Q14126 1118 aa13.98□□□□□ -0.17
TVP23C-207ENST00000523573 HRO43593 1189 aa13.96□□□□□ -0.17
TVP23C-207ENST00000523573 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
TVP23C-207ENST00000523573 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
TVP23C-207ENST00000523573 KCNK17Q96T54 332 aa13.9□□□□□ -0.18
TVP23C-207ENST00000523573 CHGAP10645 457 aaKnown RBP13.89□□□□□ -0.19
TVP23C-207ENST00000523573 KCTD12Q96CX2 325 aaKnown RBP13.89□□□□□ -0.19
TVP23C-207ENST00000523573 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
TVP23C-207ENST00000523573 RYDENQ9NUL5 291 aaKnown RBP13.84□□□□□ -0.19
TVP23C-207ENST00000523573 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
TVP23C-207ENST00000523573 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
TVP23C-207ENST00000523573 VPS9D1Q9Y2B5 631 aa13.82□□□□□ -0.2
TVP23C-207ENST00000523573 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
TVP23C-207ENST00000523573 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
TVP23C-207ENST00000523573 CRISPLD2Q9H0B8 497 aa13.8□□□□□ -0.2
TVP23C-207ENST00000523573 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
TVP23C-207ENST00000523573 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
TVP23C-207ENST00000523573 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
TVP23C-207ENST00000523573 FOSBP53539 338 aa13.74□□□□□ -0.21
TVP23C-207ENST00000523573 PTPN5P54829 565 aa13.73□□□□□ -0.21
TVP23C-207ENST00000523573 PTPREP23469 700 aa13.72□□□□□ -0.21
TVP23C-207ENST00000523573 PDE4AP27815 886 aa13.7□□□□□ -0.22
TVP23C-207ENST00000523573 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
TVP23C-207ENST00000523573 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
TVP23C-207ENST00000523573 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
TVP23C-207ENST00000523573 BHMG1C9JSJ3 638 aaPredicted RBP13.67□□□□□ -0.22
TVP23C-207ENST00000523573 ZBED2Q9BTP6 218 aa13.67□□□□□ -0.22
TVP23C-207ENST00000523573 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
TVP23C-207ENST00000523573 EVI5O60447 810 aa13.66□□□□□ -0.22
TVP23C-207ENST00000523573 THSD4Q6ZMP0 1018 aa13.66□□□□□ -0.22
TVP23C-207ENST00000523573 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
TVP23C-207ENST00000523573 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
TVP23C-207ENST00000523573 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
TVP23C-207ENST00000523573 WNT2BQ93097 391 aa13.63□□□□□ -0.23
TVP23C-207ENST00000523573 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
TVP23C-207ENST00000523573 ADAM33Q9BZ11 813 aa13.61□□□□□ -0.23
TVP23C-207ENST00000523573 RGS20O76081 388 aa13.6□□□□□ -0.23
TVP23C-207ENST00000523573 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
TVP23C-207ENST00000523573 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
TVP23C-207ENST00000523573 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
TVP23C-207ENST00000523573 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
TVP23C-207ENST00000523573 MFSD10Q14728 455 aa13.53□□□□□ -0.24
TVP23C-207ENST00000523573 A0A0G2JS52 829 aa13.52□□□□□ -0.25
TVP23C-207ENST00000523573 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
TVP23C-207ENST00000523573 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
TVP23C-207ENST00000523573 RABGEF1Q9UJ41 708 aa13.49□□□□□ -0.25
TVP23C-207ENST00000523573 PCDHGA10Q9Y5H3 936 aa13.49□□□□□ -0.25
TVP23C-207ENST00000523573 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
TVP23C-207ENST00000523573 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
TVP23C-207ENST00000523573 IRX2Q9BZI1 471 aaPredicted RBP13.46□□□□□ -0.25
TVP23C-207ENST00000523573 PROX2Q3B8N5 592 aa13.45□□□□□ -0.26
TVP23C-207ENST00000523573 COL9A1P20849 921 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms