RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
NSMCE2-211ENST00000523549 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
NSMCE2-211ENST00000523549 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
NSMCE2-211ENST00000523549 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
NSMCE2-211ENST00000523549 KRTAP3-3Q9BYR6 98 aa12.75□□□□□ -0.37
NSMCE2-211ENST00000523549 KRTAP3-2Q9BYR7 98 aa12.75□□□□□ -0.37
NSMCE2-211ENST00000523549 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
NSMCE2-211ENST00000523549 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
NSMCE2-211ENST00000523549 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
NSMCE2-211ENST00000523549 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
NSMCE2-211ENST00000523549 KIF3CO14782 793 aa12.68□□□□□ -0.38
NSMCE2-211ENST00000523549 ERBB3P21860 1342 aa12.66□□□□□ -0.38
NSMCE2-211ENST00000523549 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
NSMCE2-211ENST00000523549 PPP1R37O75864 691 aa12.62□□□□□ -0.39
NSMCE2-211ENST00000523549 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
NSMCE2-211ENST00000523549 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
NSMCE2-211ENST00000523549 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
NSMCE2-211ENST00000523549 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
NSMCE2-211ENST00000523549 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
NSMCE2-211ENST00000523549 SLC34A2O95436 690 aa12.53□□□□□ -0.4
NSMCE2-211ENST00000523549 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
NSMCE2-211ENST00000523549 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
NSMCE2-211ENST00000523549 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
NSMCE2-211ENST00000523549 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
NSMCE2-211ENST00000523549 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
NSMCE2-211ENST00000523549 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
NSMCE2-211ENST00000523549 NUDT7P0C024 238 aa12.43□□□□□ -0.42
NSMCE2-211ENST00000523549 FOXK1P85037 733 aa12.41□□□□□ -0.42
NSMCE2-211ENST00000523549 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
NSMCE2-211ENST00000523549 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
NSMCE2-211ENST00000523549 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
NSMCE2-211ENST00000523549 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
NSMCE2-211ENST00000523549 POTEEQ6S8J3 1075 aa12.36□□□□□ -0.43
NSMCE2-211ENST00000523549 PLPP6Q8IY26 295 aa12.36□□□□□ -0.43
NSMCE2-211ENST00000523549 DSG2Q14126 1118 aa12.34□□□□□ -0.43
NSMCE2-211ENST00000523549 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
NSMCE2-211ENST00000523549 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
NSMCE2-211ENST00000523549 MYT1LQ9UL68 1186 aa12.31□□□□□ -0.44
NSMCE2-211ENST00000523549 PBX2P40425 430 aa12.3□□□□□ -0.44
NSMCE2-211ENST00000523549 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
NSMCE2-211ENST00000523549 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
NSMCE2-211ENST00000523549 PTGER2P43116 358 aa12.29□□□□□ -0.44
NSMCE2-211ENST00000523549 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
NSMCE2-211ENST00000523549 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
NSMCE2-211ENST00000523549 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
NSMCE2-211ENST00000523549 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
NSMCE2-211ENST00000523549 NCKAP5LQ9HCH0 1330 aa12.22□□□□□ -0.45
NSMCE2-211ENST00000523549 TBC1D12O60347 775 aa12.22□□□□□ -0.45
NSMCE2-211ENST00000523549 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
NSMCE2-211ENST00000523549 ARHGAP33O14559 1287 aa12.21□□□□□ -0.45
NSMCE2-211ENST00000523549 PDE4AP27815 886 aa12.17□□□□□ -0.46
NSMCE2-211ENST00000523549 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
NSMCE2-211ENST00000523549 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
NSMCE2-211ENST00000523549 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
NSMCE2-211ENST00000523549 TK2O00142 265 aa12.12□□□□□ -0.47
NSMCE2-211ENST00000523549 PSEN2P49810 448 aa12.12□□□□□ -0.47
NSMCE2-211ENST00000523549 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
NSMCE2-211ENST00000523549 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
NSMCE2-211ENST00000523549 HRO43593 1189 aa12.1□□□□□ -0.47
NSMCE2-211ENST00000523549 MFSD10Q14728 455 aa12.1□□□□□ -0.47
NSMCE2-211ENST00000523549 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
NSMCE2-211ENST00000523549 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
NSMCE2-211ENST00000523549 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
NSMCE2-211ENST00000523549 DDX27Q96GQ7 796 aaKnown RBP12.06□□□□□ -0.48
NSMCE2-211ENST00000523549 FOSBP53539 338 aa12.04□□□□□ -0.48
NSMCE2-211ENST00000523549 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
NSMCE2-211ENST00000523549 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
NSMCE2-211ENST00000523549 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
NSMCE2-211ENST00000523549 EVI5O60447 810 aa12.01□□□□□ -0.49
NSMCE2-211ENST00000523549 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
NSMCE2-211ENST00000523549 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
NSMCE2-211ENST00000523549 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
NSMCE2-211ENST00000523549 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
NSMCE2-211ENST00000523549 HCSTQ9UBK5 93 aa11.98□□□□□ -0.49
NSMCE2-211ENST00000523549 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
NSMCE2-211ENST00000523549 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
NSMCE2-211ENST00000523549 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
NSMCE2-211ENST00000523549 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
NSMCE2-211ENST00000523549 PTPREP23469 700 aa11.93□□□□□ -0.5
NSMCE2-211ENST00000523549 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
NSMCE2-211ENST00000523549 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
NSMCE2-211ENST00000523549 ADAM33Q9BZ11 813 aa11.93□□□□□ -0.5
NSMCE2-211ENST00000523549 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
NSMCE2-211ENST00000523549 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
NSMCE2-211ENST00000523549 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
NSMCE2-211ENST00000523549 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
NSMCE2-211ENST00000523549 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
NSMCE2-211ENST00000523549 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
NSMCE2-211ENST00000523549 PHF14O94880 888 aa11.83□□□□□ -0.52
NSMCE2-211ENST00000523549 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
NSMCE2-211ENST00000523549 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
NSMCE2-211ENST00000523549 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
NSMCE2-211ENST00000523549 DPYSL4O14531 572 aa11.79□□□□□ -0.52
NSMCE2-211ENST00000523549 COL9A1P20849 921 aa11.79□□□□□ -0.52
NSMCE2-211ENST00000523549 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
NSMCE2-211ENST00000523549 SPRYD3Q8NCJ5 442 aa11.78□□□□□ -0.52
NSMCE2-211ENST00000523549 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
NSMCE2-211ENST00000523549 MRPL50Q8N5N7 158 aaKnown RBP11.77□□□□□ -0.53
NSMCE2-211ENST00000523549 PTPN5P54829 565 aa11.76□□□□□ -0.53
NSMCE2-211ENST00000523549 RABGEF1Q9UJ41 708 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms