RNA–Protein interactions for RNA: ENST00000520563.3

SORBS3-209, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 4

Gene SORBS3, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-209ENST00000520563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
SORBS3-209ENST00000520563 HECW1Q76N89 1606 aa18.9■□□□□ 0.62
SORBS3-209ENST00000520563 ARHGEF12Q9NZN5 1544 aa18.89■□□□□ 0.61
SORBS3-209ENST00000520563 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
SORBS3-209ENST00000520563 DMRT2Q9Y5R5 561 aa18.86■□□□□ 0.61
SORBS3-209ENST00000520563 CEBPAP49715 358 aaPredicted RBP18.84■□□□□ 0.61
SORBS3-209ENST00000520563 ATP10AO60312 1499 aa18.81■□□□□ 0.6
SORBS3-209ENST00000520563 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
SORBS3-209ENST00000520563 UHRF1BP1Q6BDS2 1440 aa18.81■□□□□ 0.6
SORBS3-209ENST00000520563 SCAPERQ9BY12 1400 aa18.81■□□□□ 0.6
SORBS3-209ENST00000520563 PTPRTO14522 1441 aa18.77■□□□□ 0.6
SORBS3-209ENST00000520563 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
SORBS3-209ENST00000520563 PLCH2O75038 1416 aa18.75■□□□□ 0.59
SORBS3-209ENST00000520563 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
SORBS3-209ENST00000520563 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
SORBS3-209ENST00000520563 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
SORBS3-209ENST00000520563 CDK13Q14004 1512 aaKnown RBP18.72■□□□□ 0.59
SORBS3-209ENST00000520563 C3P01024 1663 aa18.69■□□□□ 0.58
SORBS3-209ENST00000520563 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
SORBS3-209ENST00000520563 MYO5CQ9NQX4 1742 aa18.68■□□□□ 0.58
SORBS3-209ENST00000520563 ZNF518AQ6AHZ1 1483 aa18.66■□□□□ 0.58
SORBS3-209ENST00000520563 KDM5CP41229 1560 aa18.66■□□□□ 0.58
SORBS3-209ENST00000520563 DIP2CQ9Y2E4 1556 aa18.66■□□□□ 0.58
SORBS3-209ENST00000520563 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
SORBS3-209ENST00000520563 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
SORBS3-209ENST00000520563 REREQ9P2R6 1566 aa18.64■□□□□ 0.57
SORBS3-209ENST00000520563 AFAP1Q8N556 730 aa18.62■□□□□ 0.57
SORBS3-209ENST00000520563 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
SORBS3-209ENST00000520563 ABCA6Q8N139 1617 aa18.61■□□□□ 0.57
SORBS3-209ENST00000520563 KIF14Q15058 1648 aa18.6■□□□□ 0.57
SORBS3-209ENST00000520563 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
SORBS3-209ENST00000520563 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.56
SORBS3-209ENST00000520563 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
SORBS3-209ENST00000520563 UBAP1LF5GYI3 381 aa18.57■□□□□ 0.56
SORBS3-209ENST00000520563 ESF1Q9H501 851 aaKnown RBP18.57■□□□□ 0.56
SORBS3-209ENST00000520563 AGLP35573 1532 aa18.57■□□□□ 0.56
SORBS3-209ENST00000520563 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
SORBS3-209ENST00000520563 MLH3Q9UHC1 1453 aa18.55■□□□□ 0.56
SORBS3-209ENST00000520563 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
SORBS3-209ENST00000520563 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
SORBS3-209ENST00000520563 NCKAP5LQ9HCH0 1330 aa18.5■□□□□ 0.55
SORBS3-209ENST00000520563 NPATQ14207 1427 aa18.5■□□□□ 0.55
SORBS3-209ENST00000520563 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
SORBS3-209ENST00000520563 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
SORBS3-209ENST00000520563 CDK11AQ9UQ88 783 aaPredicted RBP18.49■□□□□ 0.55
SORBS3-209ENST00000520563 MED1Q15648 1581 aaPredicted RBP18.49■□□□□ 0.55
SORBS3-209ENST00000520563 EEA1Q15075 1411 aa18.49■□□□□ 0.55
SORBS3-209ENST00000520563 MROH2AA6NES4 1674 aa18.48■□□□□ 0.55
SORBS3-209ENST00000520563 ABCC1P33527 1531 aa18.48■□□□□ 0.55
SORBS3-209ENST00000520563 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
SORBS3-209ENST00000520563 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
SORBS3-209ENST00000520563 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
SORBS3-209ENST00000520563 ZNF142P52746 1687 aaPredicted RBP18.45■□□□□ 0.54
SORBS3-209ENST00000520563 CLIP1P30622 1438 aa18.45■□□□□ 0.54
SORBS3-209ENST00000520563 PLA2R1Q13018 1463 aa18.45■□□□□ 0.54
SORBS3-209ENST00000520563 PREX2Q70Z35 1606 aa18.44■□□□□ 0.54
SORBS3-209ENST00000520563 MYO3AQ8NEV4 1616 aa18.44■□□□□ 0.54
SORBS3-209ENST00000520563 TCOF1Q13428 1488 aaKnown RBP18.44■□□□□ 0.54
SORBS3-209ENST00000520563 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
SORBS3-209ENST00000520563 HSPA1LP34931 641 aa18.42■□□□□ 0.54
SORBS3-209ENST00000520563 PKD2Q13563 968 aa18.42■□□□□ 0.54
SORBS3-209ENST00000520563 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
SORBS3-209ENST00000520563 LRRIQ1Q96JM4 1722 aa18.42■□□□□ 0.54
SORBS3-209ENST00000520563 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
SORBS3-209ENST00000520563 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
SORBS3-209ENST00000520563 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
SORBS3-209ENST00000520563 CLTCQ00610 1675 aaKnown RBP18.38■□□□□ 0.53
SORBS3-209ENST00000520563 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
SORBS3-209ENST00000520563 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
SORBS3-209ENST00000520563 SAMD9LQ8IVG5 1584 aa18.37■□□□□ 0.53
SORBS3-209ENST00000520563 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
SORBS3-209ENST00000520563 CDC42BPAQ5VT25 1732 aa18.33■□□□□ 0.52
SORBS3-209ENST00000520563 TOM1O60784 492 aa18.32■□□□□ 0.52
SORBS3-209ENST00000520563 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
SORBS3-209ENST00000520563 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
SORBS3-209ENST00000520563 CPS1P31327 1500 aa18.31■□□□□ 0.52
SORBS3-209ENST00000520563 SYCP2Q9BX26 1530 aa18.3■□□□□ 0.52
SORBS3-209ENST00000520563 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
SORBS3-209ENST00000520563 DNMT1P26358 1616 aaKnown RBP18.29■□□□□ 0.52
SORBS3-209ENST00000520563 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
SORBS3-209ENST00000520563 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
SORBS3-209ENST00000520563 A2ML1A8K2U0 1454 aa18.28■□□□□ 0.52
SORBS3-209ENST00000520563 UBTFP17480 764 aaKnown RBP18.28■□□□□ 0.52
SORBS3-209ENST00000520563 NEURL4Q96JN8 1562 aa18.28■□□□□ 0.52
SORBS3-209ENST00000520563 POLR1AO95602 1720 aaPredicted RBP18.27■□□□□ 0.52
SORBS3-209ENST00000520563 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
SORBS3-209ENST00000520563 A2MP01023 1474 aa18.26■□□□□ 0.51
SORBS3-209ENST00000520563 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
SORBS3-209ENST00000520563 INO80Q9ULG1 1556 aaPredicted RBP18.26■□□□□ 0.51
SORBS3-209ENST00000520563 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
SORBS3-209ENST00000520563 ALKQ9UM73 1620 aa18.26■□□□□ 0.51
SORBS3-209ENST00000520563 GGT6Q6P531 493 aa18.25■□□□□ 0.51
SORBS3-209ENST00000520563 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
SORBS3-209ENST00000520563 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
SORBS3-209ENST00000520563 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
SORBS3-209ENST00000520563 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
SORBS3-209ENST00000520563 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
SORBS3-209ENST00000520563 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
SORBS3-209ENST00000520563 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
SORBS3-209ENST00000520563 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms