RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
PABPC1-212ENST00000519622 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
PABPC1-212ENST00000519622 NLRP6P59044 892 aa8.25□□□□□ -1.09
PABPC1-212ENST00000519622 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
PABPC1-212ENST00000519622 TAOK2Q9UL54 1235 aa8.25□□□□□ -1.09
PABPC1-212ENST00000519622 HS6ST3Q8IZP7 471 aa8.23□□□□□ -1.09
PABPC1-212ENST00000519622 EMP3P54852 163 aa8.21□□□□□ -1.1
PABPC1-212ENST00000519622 SHROOM4Q9ULL8 1493 aa8.19□□□□□ -1.1
PABPC1-212ENST00000519622 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
PABPC1-212ENST00000519622 PPP1R37O75864 691 aa8.18□□□□□ -1.1
PABPC1-212ENST00000519622 HS3ST6Q96QI5 342 aa8.18□□□□□ -1.1
PABPC1-212ENST00000519622 BBXQ8WY36 941 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-212ENST00000519622 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-212ENST00000519622 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
PABPC1-212ENST00000519622 DOK7Q18PE1 504 aa8.15□□□□□ -1.1
PABPC1-212ENST00000519622 NKX1-1Q15270 411 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-212ENST00000519622 KIF3CO14782 793 aa8.13□□□□□ -1.11
PABPC1-212ENST00000519622 C2orf72A6NCS6 295 aa8.12□□□□□ -1.11
PABPC1-212ENST00000519622 GPR153Q6NV75 609 aa8.12□□□□□ -1.11
PABPC1-212ENST00000519622 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
PABPC1-212ENST00000519622 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
PABPC1-212ENST00000519622 DNAJC5Q9H3Z4 198 aa8.12□□□□□ -1.11
PABPC1-212ENST00000519622 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-212ENST00000519622 PAXIP1Q6ZW49 1069 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-212ENST00000519622 SPNS2Q8IVW8 549 aa8.11□□□□□ -1.11
PABPC1-212ENST00000519622 MYO15BQ96JP2 1530 aa8.1□□□□□ -1.11
PABPC1-212ENST00000519622 PLCB2Q00722 1185 aa8.1□□□□□ -1.11
PABPC1-212ENST00000519622 KHSRPQ92945 711 aaKnown RBP eCLIP8.1□□□□□ -1.117e-7■■□□□ 13.4
PABPC1-212ENST00000519622 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
PABPC1-212ENST00000519622 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
PABPC1-212ENST00000519622 ERBB3P21860 1342 aa8.08□□□□□ -1.12
PABPC1-212ENST00000519622 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
PABPC1-212ENST00000519622 ZSWIM6Q9HCJ5 1215 aa8.07□□□□□ -1.12
PABPC1-212ENST00000519622 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
PABPC1-212ENST00000519622 VARS2Q5ST30 1063 aaKnown RBP8.06□□□□□ -1.12
PABPC1-212ENST00000519622 SPRYD3Q8NCJ5 442 aa8.06□□□□□ -1.12
PABPC1-212ENST00000519622 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-212ENST00000519622 TMC2Q8TDI7 906 aa8.02□□□□□ -1.13
PABPC1-212ENST00000519622 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
PABPC1-212ENST00000519622 ABCC9O60706 1549 aa8.01□□□□□ -1.13
PABPC1-212ENST00000519622 SLC24A1O60721 1099 aa8□□□□□ -1.13
PABPC1-212ENST00000519622 SLC34A2O95436 690 aa7.99□□□□□ -1.13
PABPC1-212ENST00000519622 NUDT7P0C024 238 aa7.99□□□□□ -1.13
PABPC1-212ENST00000519622 ZNF687Q8N1G0 1237 aa7.99□□□□□ -1.13
PABPC1-212ENST00000519622 PCDHGA4Q9Y5G9 962 aa7.99□□□□□ -1.13
PABPC1-212ENST00000519622 ZNF316A6NFI3 1004 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-212ENST00000519622 GPHNQ9NQX3 736 aaPredicted RBP7.97□□□□□ -1.13
PABPC1-212ENST00000519622 RYDENQ9NUL5 291 aaKnown RBP7.97□□□□□ -1.13
PABPC1-212ENST00000519622 DSG2Q14126 1118 aa7.96□□□□□ -1.14
PABPC1-212ENST00000519622 FOXK1P85037 733 aa7.95□□□□□ -1.14
PABPC1-212ENST00000519622 PLPP6Q8IY26 295 aa7.95□□□□□ -1.14
PABPC1-212ENST00000519622 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
PABPC1-212ENST00000519622 LHX6Q9UPM6 363 aa7.95□□□□□ -1.14
PABPC1-212ENST00000519622 SCRIBQ14160 1630 aa7.95□□□□□ -1.14
PABPC1-212ENST00000519622 KDM4FA0A1W2PPD8 638 aa7.94□□□□□ -1.14
PABPC1-212ENST00000519622 POTEEQ6S8J3 1075 aa7.93□□□□□ -1.14
PABPC1-212ENST00000519622 NACADO15069 1562 aa7.93□□□□□ -1.14
PABPC1-212ENST00000519622 PTCD2Q8WV60 388 aaKnown RBP7.92□□□□□ -1.14
PABPC1-212ENST00000519622 NCKAP5LQ9HCH0 1330 aa7.9□□□□□ -1.14
PABPC1-212ENST00000519622 CRISPLD2Q9H0B8 497 aa7.9□□□□□ -1.14
PABPC1-212ENST00000519622 AXIN2Q9Y2T1 843 aa7.9□□□□□ -1.14
PABPC1-212ENST00000519622 SUPT5HO00267 1087 aaKnown RBP7.89□□□□□ -1.15
PABPC1-212ENST00000519622 ANKRD13DQ6ZTN6 518 aa7.89□□□□□ -1.15
PABPC1-212ENST00000519622 CADPS2Q86UW7 1296 aa7.89□□□□□ -1.15
PABPC1-212ENST00000519622 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
PABPC1-212ENST00000519622 OXER1Q8TDS5 423 aa7.85□□□□□ -1.15
PABPC1-212ENST00000519622 KDM2AQ9Y2K7 1162 aa7.85□□□□□ -1.15
PABPC1-212ENST00000519622 PPP1R15BQ5SWA1 713 aa7.84□□□□□ -1.15
PABPC1-212ENST00000519622 UPF1Q92900 1129 aaKnown RBP eCLIP7.84□□□□□ -1.15
PABPC1-212ENST00000519622 RSF1Q96T23 1441 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-212ENST00000519622 RNF166Q96A37 237 aaPredicted RBP7.83□□□□□ -1.16
PABPC1-212ENST00000519622 MYT1LQ9UL68 1186 aa7.83□□□□□ -1.16
PABPC1-212ENST00000519622 PDE4AP27815 886 aa7.82□□□□□ -1.16
PABPC1-212ENST00000519622 VSIG10Q8N0Z9 540 aa7.82□□□□□ -1.16
PABPC1-212ENST00000519622 LARP6Q9BRS8 491 aaKnown RBP7.82□□□□□ -1.16
PABPC1-212ENST00000519622 TBC1D12O60347 775 aa7.81□□□□□ -1.16
PABPC1-212ENST00000519622 PBX2P40425 430 aa7.81□□□□□ -1.16
PABPC1-212ENST00000519622 UNC13AQ9UPW8 1703 aa7.81□□□□□ -1.16
PABPC1-212ENST00000519622 PSEN2P49810 448 aa7.8□□□□□ -1.16
PABPC1-212ENST00000519622 DMRTA1Q5VZB9 504 aa7.8□□□□□ -1.16
PABPC1-212ENST00000519622 ARHGAP33O14559 1287 aa7.79□□□□□ -1.16
PABPC1-212ENST00000519622 RB1CC1Q8TDY2 1594 aa7.79□□□□□ -1.16
PABPC1-212ENST00000519622 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-212ENST00000519622 DDX27Q96GQ7 796 aaKnown RBP7.78□□□□□ -1.16
PABPC1-212ENST00000519622 CECR2Q9BXF3 1484 aa7.78□□□□□ -1.16
PABPC1-212ENST00000519622 MFSD10Q14728 455 aa7.77□□□□□ -1.17
PABPC1-212ENST00000519622 EIF4G1Q04637 1599 aaKnown RBP7.76□□□□□ -1.17
PABPC1-212ENST00000519622 MROH2BQ7Z745 1585 aa7.76□□□□□ -1.17
PABPC1-212ENST00000519622 PPP4R3BQ5MIZ7 849 aa7.76□□□□□ -1.17
PABPC1-212ENST00000519622 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
PABPC1-212ENST00000519622 EMILIN3Q9NT22 766 aa7.76□□□□□ -1.17
PABPC1-212ENST00000519622 PTGER2P43116 358 aa7.75□□□□□ -1.17
PABPC1-212ENST00000519622 ANO8Q9HCE9 1232 aaPredicted RBP7.75□□□□□ -1.17
PABPC1-212ENST00000519622 ZNF454Q8N9F8 522 aa7.74□□□□□ -1.17
PABPC1-212ENST00000519622 EVI5O60447 810 aa7.73□□□□□ -1.17
PABPC1-212ENST00000519622 HRO43593 1189 aa7.72□□□□□ -1.17
PABPC1-212ENST00000519622 FOSBP53539 338 aa7.72□□□□□ -1.17
PABPC1-212ENST00000519622 KCNK17Q96T54 332 aa7.72□□□□□ -1.17
PABPC1-212ENST00000519622 BAZ1AQ9NRL2 1556 aaPredicted RBP7.71□□□□□ -1.17
PABPC1-212ENST00000519622 BICRAQ9NZM4 1560 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms