RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 ERBB3P21860 1342 aa6.5□□□□□ -1.37
CCNC-208ENST00000519617 NLRP6P59044 892 aa6.49□□□□□ -1.37
CCNC-208ENST00000519617 FBXO22Q8NEZ5 403 aa6.49□□□□□ -1.37
CCNC-208ENST00000519617 BCL11BQ9C0K0 894 aaPredicted RBP6.49□□□□□ -1.37
CCNC-208ENST00000519617 GPR153Q6NV75 609 aa6.47□□□□□ -1.37
CCNC-208ENST00000519617 STK24Q9Y6E0 443 aa6.46□□□□□ -1.38
CCNC-208ENST00000519617 VARS2Q5ST30 1063 aaKnown RBP6.45□□□□□ -1.38
CCNC-208ENST00000519617 MFRPQ9BY79 579 aa6.45□□□□□ -1.38
CCNC-208ENST00000519617 ECM2O94769 699 aaPredicted RBP6.44□□□□□ -1.38
CCNC-208ENST00000519617 STK25O00506 426 aa6.43□□□□□ -1.38
CCNC-208ENST00000519617 ZNF687Q8N1G0 1237 aa6.43□□□□□ -1.38
CCNC-208ENST00000519617 PKD2Q13563 968 aa6.42□□□□□ -1.38
CCNC-208ENST00000519617 ARSIQ5FYB1 569 aa6.42□□□□□ -1.38
CCNC-208ENST00000519617 KIF3CO14782 793 aa6.41□□□□□ -1.38
CCNC-208ENST00000519617 RGL2O15211 777 aa6.4□□□□□ -1.38
CCNC-208ENST00000519617 C2orf72A6NCS6 295 aa6.38□□□□□ -1.39
CCNC-208ENST00000519617 ZNF316A6NFI3 1004 aaPredicted RBP6.38□□□□□ -1.39
CCNC-208ENST00000519617 KHSRPQ92945 711 aaKnown RBP eCLIP6.37□□□□□ -1.39
CCNC-208ENST00000519617 SLC34A2O95436 690 aa6.36□□□□□ -1.39
CCNC-208ENST00000519617 RNF166Q96A37 237 aaPredicted RBP6.36□□□□□ -1.39
CCNC-208ENST00000519617 PTGER2P43116 358 aa6.35□□□□□ -1.39
CCNC-208ENST00000519617 MYT1LQ9UL68 1186 aa6.35□□□□□ -1.39
CCNC-208ENST00000519617 PPP1R37O75864 691 aa6.33□□□□□ -1.4
CCNC-208ENST00000519617 TMC2Q8TDI7 906 aa6.33□□□□□ -1.4
CCNC-208ENST00000519617 PCDHGA4Q9Y5G9 962 aa6.33□□□□□ -1.4
CCNC-208ENST00000519617 NUDT7P0C024 238 aa6.32□□□□□ -1.4
CCNC-208ENST00000519617 PBX2P40425 430 aa6.31□□□□□ -1.4
CCNC-208ENST00000519617 LSM11P83369 360 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCNC-208ENST00000519617 ANKRD13DQ6ZTN6 518 aa6.31□□□□□ -1.4
CCNC-208ENST00000519617 LHX6Q9UPM6 363 aa6.3□□□□□ -1.4
CCNC-208ENST00000519617 KDM4FA0A1W2PPD8 638 aa6.28□□□□□ -1.4
CCNC-208ENST00000519617 POTEEQ6S8J3 1075 aa6.28□□□□□ -1.4
CCNC-208ENST00000519617 HS6ST3Q8IZP7 471 aa6.28□□□□□ -1.4
CCNC-208ENST00000519617 PTCD2Q8WV60 388 aaKnown RBP6.28□□□□□ -1.4
CCNC-208ENST00000519617 PSDA5PKW4 1024 aaPredicted RBP6.26□□□□□ -1.41
CCNC-208ENST00000519617 FOXK1P85037 733 aa6.26□□□□□ -1.41
CCNC-208ENST00000519617 GPHNQ9NQX3 736 aaPredicted RBP6.26□□□□□ -1.41
CCNC-208ENST00000519617 AXIN2Q9Y2T1 843 aa6.25□□□□□ -1.41
CCNC-208ENST00000519617 PLPP6Q8IY26 295 aa6.24□□□□□ -1.41
CCNC-208ENST00000519617 DNAJC5Q9H3Z4 198 aa6.24□□□□□ -1.41
CCNC-208ENST00000519617 ARHGAP33O14559 1287 aa6.23□□□□□ -1.41
CCNC-208ENST00000519617 DSG2Q14126 1118 aa6.22□□□□□ -1.41
CCNC-208ENST00000519617 TBC1D12O60347 775 aa6.21□□□□□ -1.42
CCNC-208ENST00000519617 CHGAP10645 457 aaKnown RBP6.21□□□□□ -1.42
CCNC-208ENST00000519617 TK2O00142 265 aa6.2□□□□□ -1.42
CCNC-208ENST00000519617 NKX1-1Q15270 411 aaPredicted RBP6.2□□□□□ -1.42
CCNC-208ENST00000519617 ADGRD1Q6QNK2 874 aa6.2□□□□□ -1.42
CCNC-208ENST00000519617 RYDENQ9NUL5 291 aaKnown RBP6.19□□□□□ -1.42
CCNC-208ENST00000519617 HRO43593 1189 aa6.18□□□□□ -1.42
CCNC-208ENST00000519617 PPP4R3BQ5MIZ7 849 aa6.18□□□□□ -1.42
CCNC-208ENST00000519617 PSEN2P49810 448 aa6.17□□□□□ -1.42
CCNC-208ENST00000519617 DMRTA1Q5VZB9 504 aa6.17□□□□□ -1.42
CCNC-208ENST00000519617 OXER1Q8TDS5 423 aa6.17□□□□□ -1.42
CCNC-208ENST00000519617 CRISPLD2Q9H0B8 497 aa6.17□□□□□ -1.42
CCNC-208ENST00000519617 HCSTQ9UBK5 93 aa6.17□□□□□ -1.42
CCNC-208ENST00000519617 PPP1R15BQ5SWA1 713 aa6.13□□□□□ -1.43
CCNC-208ENST00000519617 PLA2G2EQ9NZK7 142 aa6.13□□□□□ -1.43
CCNC-208ENST00000519617 PDE4AP27815 886 aa6.12□□□□□ -1.43
CCNC-208ENST00000519617 KCNK17Q96T54 332 aa6.12□□□□□ -1.43
CCNC-208ENST00000519617 NCKAP5LQ9HCH0 1330 aa6.12□□□□□ -1.43
CCNC-208ENST00000519617 UPF1Q92900 1129 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCNC-208ENST00000519617 KCNH8Q96L42 1107 aa6.11□□□□□ -1.43
CCNC-208ENST00000519617 SLC4A5Q9BY07 1137 aa6.11□□□□□ -1.43
CCNC-208ENST00000519617 BCL2L12Q9HB09 334 aa6.11□□□□□ -1.43
CCNC-208ENST00000519617 ANO8Q9HCE9 1232 aaPredicted RBP6.11□□□□□ -1.43
CCNC-208ENST00000519617 VPS9D1Q9Y2B5 631 aa6.11□□□□□ -1.43
CCNC-208ENST00000519617 GTPBP6O43824 516 aaPredicted RBP6.1□□□□□ -1.43
CCNC-208ENST00000519617 FOSBP53539 338 aa6.1□□□□□ -1.43
CCNC-208ENST00000519617 ZNF454Q8N9F8 522 aa6.1□□□□□ -1.43
CCNC-208ENST00000519617 STAC3Q96MF2 364 aa6.1□□□□□ -1.43
CCNC-208ENST00000519617 KCTD12Q96CX2 325 aaKnown RBP6.08□□□□□ -1.44
CCNC-208ENST00000519617 BHMG1C9JSJ3 638 aaPredicted RBP6.07□□□□□ -1.44
CCNC-208ENST00000519617 JPH4Q96JJ6 628 aa6.07□□□□□ -1.44
CCNC-208ENST00000519617 EVI5O60447 810 aa6.06□□□□□ -1.44
CCNC-208ENST00000519617 PTPREP23469 700 aa6.06□□□□□ -1.44
CCNC-208ENST00000519617 MFSD10Q14728 455 aa6.06□□□□□ -1.44
CCNC-208ENST00000519617 DDX27Q96GQ7 796 aaKnown RBP6.06□□□□□ -1.44
CCNC-208ENST00000519617 LARP6Q9BRS8 491 aaKnown RBP6.06□□□□□ -1.44
CCNC-208ENST00000519617 ZDHHC16Q969W1 377 aa6.05□□□□□ -1.44
CCNC-208ENST00000519617 ZBED2Q9BTP6 218 aa6.05□□□□□ -1.44
CCNC-208ENST00000519617 MAP3K9P80192 1104 aa6.03□□□□□ -1.44
CCNC-208ENST00000519617 ADAM33Q9BZ11 813 aa6.03□□□□□ -1.44
CCNC-208ENST00000519617 PTPN5P54829 565 aa6.02□□□□□ -1.45
CCNC-208ENST00000519617 IFFO2Q5TF58 517 aa6.02□□□□□ -1.45
CCNC-208ENST00000519617 EMILIN3Q9NT22 766 aa6.02□□□□□ -1.45
CCNC-208ENST00000519617 THSD4Q6ZMP0 1018 aa6.01□□□□□ -1.45
CCNC-208ENST00000519617 MRPL50Q8N5N7 158 aaKnown RBP6.01□□□□□ -1.45
CCNC-208ENST00000519617 GOLGA8CPA6NN73 597 aa6□□□□□ -1.45
CCNC-208ENST00000519617 PCDHGA10Q9Y5H3 936 aa6□□□□□ -1.45
CCNC-208ENST00000519617 CADPS2Q86UW7 1296 aa5.99□□□□□ -1.45
CCNC-208ENST00000519617 WNT2BQ93097 391 aa5.99□□□□□ -1.45
CCNC-208ENST00000519617 NBPF3Q9H094 633 aa5.99□□□□□ -1.45
CCNC-208ENST00000519617 PPP1R3GB7ZBB8 358 aa5.98□□□□□ -1.45
CCNC-208ENST00000519617 FBXW7Q969H0 707 aa5.98□□□□□ -1.45
CCNC-208ENST00000519617 RGS20O76081 388 aa5.97□□□□□ -1.45
CCNC-208ENST00000519617 PHF14O94880 888 aa5.97□□□□□ -1.45
CCNC-208ENST00000519617 DCAF8L2P0C7V8 631 aa5.97□□□□□ -1.45
CCNC-208ENST00000519617 CAMK2BQ13554 666 aa5.97□□□□□ -1.45
CCNC-208ENST00000519617 TYW1BQ6NUM6 668 aa5.97□□□□□ -1.45
CCNC-208ENST00000519617 RABGEF1Q9UJ41 708 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms