RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
SH2D4A-202ENST00000518040 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
SH2D4A-202ENST00000518040 TTC37Q6PGP7 1564 aa16.88■□□□□ 0.29
SH2D4A-202ENST00000518040 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
SH2D4A-202ENST00000518040 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
SH2D4A-202ENST00000518040 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
SH2D4A-202ENST00000518040 FER1L4A9Z1Z3 1794 aa16.85■□□□□ 0.29
SH2D4A-202ENST00000518040 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
SH2D4A-202ENST00000518040 NUP153P49790 1475 aaKnown RBP16.84■□□□□ 0.29
SH2D4A-202ENST00000518040 MLECQ14165 292 aa16.82■□□□□ 0.28
SH2D4A-202ENST00000518040 SPATA31D1Q6ZQQ2 1576 aa16.82■□□□□ 0.28
SH2D4A-202ENST00000518040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.28
SH2D4A-202ENST00000518040 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
SH2D4A-202ENST00000518040 SIGLEC1Q9BZZ2 1709 aa16.79■□□□□ 0.28
SH2D4A-202ENST00000518040 HECW1Q76N89 1606 aa16.78■□□□□ 0.28
SH2D4A-202ENST00000518040 ATP10AO60312 1499 aa16.78■□□□□ 0.28
SH2D4A-202ENST00000518040 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.27
SH2D4A-202ENST00000518040 UHRF1BP1Q6BDS2 1440 aa16.77■□□□□ 0.27
SH2D4A-202ENST00000518040 PTPRTO14522 1441 aa16.75■□□□□ 0.27
SH2D4A-202ENST00000518040 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
SH2D4A-202ENST00000518040 SCAPERQ9BY12 1400 aa16.75■□□□□ 0.27
SH2D4A-202ENST00000518040 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
SH2D4A-202ENST00000518040 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
SH2D4A-202ENST00000518040 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
SH2D4A-202ENST00000518040 PLCH2O75038 1416 aa16.72■□□□□ 0.27
SH2D4A-202ENST00000518040 CEBPAP49715 358 aaPredicted RBP16.71■□□□□ 0.27
SH2D4A-202ENST00000518040 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
SH2D4A-202ENST00000518040 EFCAB2Q5VUJ9 269 aa16.69■□□□□ 0.26
SH2D4A-202ENST00000518040 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
SH2D4A-202ENST00000518040 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
SH2D4A-202ENST00000518040 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
SH2D4A-202ENST00000518040 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
SH2D4A-202ENST00000518040 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
SH2D4A-202ENST00000518040 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
SH2D4A-202ENST00000518040 MYO5CQ9NQX4 1742 aa16.61■□□□□ 0.25
SH2D4A-202ENST00000518040 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
SH2D4A-202ENST00000518040 KDM5CP41229 1560 aa16.6■□□□□ 0.25
SH2D4A-202ENST00000518040 NCOA1Q15788 1441 aa16.59■□□□□ 0.25
SH2D4A-202ENST00000518040 C3P01024 1663 aa16.59■□□□□ 0.25
SH2D4A-202ENST00000518040 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
SH2D4A-202ENST00000518040 CDK13Q14004 1512 aaKnown RBP16.58■□□□□ 0.25
SH2D4A-202ENST00000518040 AGLP35573 1532 aa16.58■□□□□ 0.24
SH2D4A-202ENST00000518040 EEA1Q15075 1411 aa16.58■□□□□ 0.24
SH2D4A-202ENST00000518040 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
SH2D4A-202ENST00000518040 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
SH2D4A-202ENST00000518040 DIP2CQ9Y2E4 1556 aa16.56■□□□□ 0.24
SH2D4A-202ENST00000518040 MLH3Q9UHC1 1453 aa16.55■□□□□ 0.24
SH2D4A-202ENST00000518040 ARHGAP5Q13017 1502 aa16.54■□□□□ 0.24
SH2D4A-202ENST00000518040 KIF14Q15058 1648 aa16.53■□□□□ 0.24
SH2D4A-202ENST00000518040 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
SH2D4A-202ENST00000518040 NPATQ14207 1427 aa16.52■□□□□ 0.24
SH2D4A-202ENST00000518040 FMN1Q68DA7 1419 aa16.52■□□□□ 0.23
SH2D4A-202ENST00000518040 CLIP1P30622 1438 aa16.51■□□□□ 0.23
SH2D4A-202ENST00000518040 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
SH2D4A-202ENST00000518040 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
SH2D4A-202ENST00000518040 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
SH2D4A-202ENST00000518040 PKD2Q13563 968 aa16.49■□□□□ 0.23
SH2D4A-202ENST00000518040 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
SH2D4A-202ENST00000518040 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
SH2D4A-202ENST00000518040 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
SH2D4A-202ENST00000518040 PLA2R1Q13018 1463 aa16.46■□□□□ 0.22
SH2D4A-202ENST00000518040 ZMYM3Q14202 1370 aa16.43■□□□□ 0.22
SH2D4A-202ENST00000518040 NCKAP5LQ9HCH0 1330 aa16.43■□□□□ 0.22
SH2D4A-202ENST00000518040 ABCC1P33527 1531 aa16.43■□□□□ 0.22
SH2D4A-202ENST00000518040 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
SH2D4A-202ENST00000518040 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
SH2D4A-202ENST00000518040 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
SH2D4A-202ENST00000518040 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
SH2D4A-202ENST00000518040 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
SH2D4A-202ENST00000518040 TCOF1Q13428 1488 aaKnown RBP16.4■□□□□ 0.22
SH2D4A-202ENST00000518040 PREX2Q70Z35 1606 aa16.39■□□□□ 0.22
SH2D4A-202ENST00000518040 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
SH2D4A-202ENST00000518040 TOM1O60784 492 aa16.38■□□□□ 0.21
SH2D4A-202ENST00000518040 HOXD11P31277 338 aaPredicted RBP16.37■□□□□ 0.21
SH2D4A-202ENST00000518040 CEP170BQ9Y4F5 1589 aaPredicted RBP16.37■□□□□ 0.21
SH2D4A-202ENST00000518040 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
SH2D4A-202ENST00000518040 SUPT6HQ7KZ85 1726 aaKnown RBP16.36■□□□□ 0.21
SH2D4A-202ENST00000518040 HSPA1LP34931 641 aa16.36■□□□□ 0.21
SH2D4A-202ENST00000518040 ARHGAP35Q9NRY4 1499 aa16.34■□□□□ 0.21
SH2D4A-202ENST00000518040 CPS1P31327 1500 aa16.34■□□□□ 0.21
SH2D4A-202ENST00000518040 PTPRKQ15262 1439 aa16.33■□□□□ 0.21
SH2D4A-202ENST00000518040 SAMD9LQ8IVG5 1584 aa16.32■□□□□ 0.2
SH2D4A-202ENST00000518040 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
SH2D4A-202ENST00000518040 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
SH2D4A-202ENST00000518040 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
SH2D4A-202ENST00000518040 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
SH2D4A-202ENST00000518040 CLTCQ00610 1675 aaKnown RBP16.31■□□□□ 0.2
SH2D4A-202ENST00000518040 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
SH2D4A-202ENST00000518040 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
SH2D4A-202ENST00000518040 CDC42BPAQ5VT25 1732 aa16.28■□□□□ 0.2
SH2D4A-202ENST00000518040 LRRIQ1Q96JM4 1722 aa16.28■□□□□ 0.2
SH2D4A-202ENST00000518040 A2MP01023 1474 aa16.27■□□□□ 0.2
SH2D4A-202ENST00000518040 ATP7AQ04656 1500 aa16.27■□□□□ 0.19
SH2D4A-202ENST00000518040 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.19
SH2D4A-202ENST00000518040 GGT6Q6P531 493 aa16.26■□□□□ 0.19
SH2D4A-202ENST00000518040 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
SH2D4A-202ENST00000518040 ZNF777Q9ULD5 760 aaPredicted RBP16.26■□□□□ 0.19
SH2D4A-202ENST00000518040 PLEKHH2Q8IVE3 1493 aa16.26■□□□□ 0.19
SH2D4A-202ENST00000518040 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
SH2D4A-202ENST00000518040 DNMT1P26358 1616 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms