RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 FAM205CA6NFA0 338 aa15.32■□□□□ 0.04
RN7SKP253-201ENST00000516424 HS3ST6Q96QI5 342 aa15.31■□□□□ 0.04
RN7SKP253-201ENST00000516424 HOXB1P14653 301 aaPredicted RBP15.29■□□□□ 0.04
RN7SKP253-201ENST00000516424 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
RN7SKP253-201ENST00000516424 SPNS2Q8IVW8 549 aa15.2■□□□□ 0.02
RN7SKP253-201ENST00000516424 KRTAP3-3Q9BYR6 98 aa15.2■□□□□ 0.02
RN7SKP253-201ENST00000516424 KRTAP3-2Q9BYR7 98 aa15.2■□□□□ 0.02
RN7SKP253-201ENST00000516424 ZSWIM6Q9HCJ5 1215 aa15.17■□□□□ 0.02
RN7SKP253-201ENST00000516424 ERBB3P21860 1342 aa15.17■□□□□ 0.02
RN7SKP253-201ENST00000516424 GPR153Q6NV75 609 aa15.15■□□□□ 0.02
RN7SKP253-201ENST00000516424 PPP1R37O75864 691 aa15.14■□□□□ 0.01
RN7SKP253-201ENST00000516424 C2orf72A6NCS6 295 aa15.13■□□□□ 0.01
RN7SKP253-201ENST00000516424 KIF3CO14782 793 aa15.13■□□□□ 0.01
RN7SKP253-201ENST00000516424 MMRN1Q13201 1228 aa15.13■□□□□ 0.01
RN7SKP253-201ENST00000516424 HS6ST3Q8IZP7 471 aa15.13■□□□□ 0.01
RN7SKP253-201ENST00000516424 VARS2Q5ST30 1063 aaKnown RBP15.11■□□□□ 0.01
RN7SKP253-201ENST00000516424 ARSIQ5FYB1 569 aa15.09■□□□□ 0.01
RN7SKP253-201ENST00000516424 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
RN7SKP253-201ENST00000516424 KHSRPQ92945 711 aaKnown RBP eCLIP15.06■□□□□ 0
RN7SKP253-201ENST00000516424 TMC2Q8TDI7 906 aa15.03■□□□□ -0
RN7SKP253-201ENST00000516424 NKX1-1Q15270 411 aaPredicted RBP14.96□□□□□ -0.01
RN7SKP253-201ENST00000516424 ZNF687Q8N1G0 1237 aa14.96□□□□□ -0.01
RN7SKP253-201ENST00000516424 ZNF316A6NFI3 1004 aaPredicted RBP14.94□□□□□ -0.02
RN7SKP253-201ENST00000516424 SLC34A2O95436 690 aa14.93□□□□□ -0.02
RN7SKP253-201ENST00000516424 NUDT7P0C024 238 aa14.93□□□□□ -0.02
RN7SKP253-201ENST00000516424 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
RN7SKP253-201ENST00000516424 PCDHGA4Q9Y5G9 962 aa14.92□□□□□ -0.02
RN7SKP253-201ENST00000516424 GPHNQ9NQX3 736 aaPredicted RBP14.85□□□□□ -0.03
RN7SKP253-201ENST00000516424 LHX6Q9UPM6 363 aa14.85□□□□□ -0.03
RN7SKP253-201ENST00000516424 FOXK1P85037 733 aa14.84□□□□□ -0.03
RN7SKP253-201ENST00000516424 PLPP6Q8IY26 295 aa14.83□□□□□ -0.04
RN7SKP253-201ENST00000516424 DSG2Q14126 1118 aa14.82□□□□□ -0.04
RN7SKP253-201ENST00000516424 RYDENQ9NUL5 291 aaKnown RBP14.8□□□□□ -0.04
RN7SKP253-201ENST00000516424 PTCD2Q8WV60 388 aaKnown RBP14.78□□□□□ -0.04
RN7SKP253-201ENST00000516424 ANKRD13DQ6ZTN6 518 aa14.77□□□□□ -0.05
RN7SKP253-201ENST00000516424 KDM4FA0A1W2PPD8 638 aa14.75□□□□□ -0.05
RN7SKP253-201ENST00000516424 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
RN7SKP253-201ENST00000516424 LSM11P83369 360 aaKnown RBP eCLIP14.74□□□□□ -0.05
RN7SKP253-201ENST00000516424 RNF166Q96A37 237 aaPredicted RBP14.74□□□□□ -0.05
RN7SKP253-201ENST00000516424 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
RN7SKP253-201ENST00000516424 POTEEQ6S8J3 1075 aa14.73□□□□□ -0.05
RN7SKP253-201ENST00000516424 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
RN7SKP253-201ENST00000516424 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.05
RN7SKP253-201ENST00000516424 CRISPLD2Q9H0B8 497 aa14.71□□□□□ -0.05
RN7SKP253-201ENST00000516424 PBX2P40425 430 aa14.7□□□□□ -0.06
RN7SKP253-201ENST00000516424 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
RN7SKP253-201ENST00000516424 PTGER2P43116 358 aa14.66□□□□□ -0.06
RN7SKP253-201ENST00000516424 PSDA5PKW4 1024 aaPredicted RBP14.65□□□□□ -0.06
RN7SKP253-201ENST00000516424 TBC1D12O60347 775 aa14.64□□□□□ -0.07
RN7SKP253-201ENST00000516424 PPP1R15BQ5SWA1 713 aa14.63□□□□□ -0.07
RN7SKP253-201ENST00000516424 UPF1Q92900 1129 aaKnown RBP eCLIP14.63□□□□□ -0.07
RN7SKP253-201ENST00000516424 OXER1Q8TDS5 423 aa14.62□□□□□ -0.07
RN7SKP253-201ENST00000516424 ARHGAP33O14559 1287 aa14.59□□□□□ -0.07
RN7SKP253-201ENST00000516424 PDE4AP27815 886 aa14.59□□□□□ -0.07
RN7SKP253-201ENST00000516424 PPP4R3BQ5MIZ7 849 aa14.57□□□□□ -0.08
RN7SKP253-201ENST00000516424 PSEN2P49810 448 aa14.55□□□□□ -0.08
RN7SKP253-201ENST00000516424 LARP6Q9BRS8 491 aaKnown RBP14.55□□□□□ -0.08
RN7SKP253-201ENST00000516424 DMRTA1Q5VZB9 504 aa14.53□□□□□ -0.08
RN7SKP253-201ENST00000516424 ADGRD1Q6QNK2 874 aa14.53□□□□□ -0.08
RN7SKP253-201ENST00000516424 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
RN7SKP253-201ENST00000516424 MFSD10Q14728 455 aa14.48□□□□□ -0.09
RN7SKP253-201ENST00000516424 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
RN7SKP253-201ENST00000516424 ZNF454Q8N9F8 522 aa14.47□□□□□ -0.09
RN7SKP253-201ENST00000516424 KCNK17Q96T54 332 aa14.47□□□□□ -0.09
RN7SKP253-201ENST00000516424 TK2O00142 265 aa14.45□□□□□ -0.1
RN7SKP253-201ENST00000516424 HRO43593 1189 aa14.43□□□□□ -0.1
RN7SKP253-201ENST00000516424 EVI5O60447 810 aa14.43□□□□□ -0.1
RN7SKP253-201ENST00000516424 FOSBP53539 338 aa14.41□□□□□ -0.1
RN7SKP253-201ENST00000516424 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
RN7SKP253-201ENST00000516424 EMILIN3Q9NT22 766 aa14.41□□□□□ -0.1
RN7SKP253-201ENST00000516424 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
RN7SKP253-201ENST00000516424 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
RN7SKP253-201ENST00000516424 MAP3K9P80192 1104 aa14.38□□□□□ -0.11
RN7SKP253-201ENST00000516424 JPH4Q96JJ6 628 aa14.36□□□□□ -0.11
RN7SKP253-201ENST00000516424 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
RN7SKP253-201ENST00000516424 VPS9D1Q9Y2B5 631 aa14.34□□□□□ -0.11
RN7SKP253-201ENST00000516424 PTPREP23469 700 aa14.31□□□□□ -0.12
RN7SKP253-201ENST00000516424 ZDHHC16Q969W1 377 aa14.31□□□□□ -0.12
RN7SKP253-201ENST00000516424 ADAM33Q9BZ11 813 aa14.31□□□□□ -0.12
RN7SKP253-201ENST00000516424 HCSTQ9UBK5 93 aa14.31□□□□□ -0.12
RN7SKP253-201ENST00000516424 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
RN7SKP253-201ENST00000516424 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
RN7SKP253-201ENST00000516424 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
RN7SKP253-201ENST00000516424 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
RN7SKP253-201ENST00000516424 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
RN7SKP253-201ENST00000516424 CAMK2BQ13554 666 aa14.26□□□□□ -0.13
RN7SKP253-201ENST00000516424 ZBED2Q9BTP6 218 aa14.25□□□□□ -0.13
RN7SKP253-201ENST00000516424 PCDHGA10Q9Y5H3 936 aa14.25□□□□□ -0.13
RN7SKP253-201ENST00000516424 BHMG1C9JSJ3 638 aaPredicted RBP14.21□□□□□ -0.13
RN7SKP253-201ENST00000516424 DPYSL4O14531 572 aa14.21□□□□□ -0.13
RN7SKP253-201ENST00000516424 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
RN7SKP253-201ENST00000516424 PLA2G2EQ9NZK7 142 aa14.2□□□□□ -0.14
RN7SKP253-201ENST00000516424 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
RN7SKP253-201ENST00000516424 PHF14O94880 888 aa14.17□□□□□ -0.14
RN7SKP253-201ENST00000516424 TYW1BQ6NUM6 668 aa14.16□□□□□ -0.14
RN7SKP253-201ENST00000516424 PPP1R3GB7ZBB8 358 aa14.15□□□□□ -0.14
RN7SKP253-201ENST00000516424 COL9A1P20849 921 aa14.15□□□□□ -0.14
RN7SKP253-201ENST00000516424 FBXW7Q969H0 707 aa14.15□□□□□ -0.14
RN7SKP253-201ENST00000516424 PTPN5P54829 565 aa14.13□□□□□ -0.15
RN7SKP253-201ENST00000516424 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms