RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 MYT1LQ9UL68 1186 aa5.98□□□□□ -1.45
RNU6-561P-201ENST00000516222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.96□□□□□ -1.46
RNU6-561P-201ENST00000516222 ZFP91Q96JP5 570 aaPredicted RBP5.96□□□□□ -1.46
RNU6-561P-201ENST00000516222 GPR153Q6NV75 609 aa5.94□□□□□ -1.46
RNU6-561P-201ENST00000516222 PHF8Q9UPP1 1060 aa5.94□□□□□ -1.46
RNU6-561P-201ENST00000516222 ARSIQ5FYB1 569 aa5.93□□□□□ -1.46
RNU6-561P-201ENST00000516222 ANKRD13DQ6ZTN6 518 aa5.93□□□□□ -1.46
RNU6-561P-201ENST00000516222 TMEM92Q6UXU6 159 aa5.91□□□□□ -1.46
RNU6-561P-201ENST00000516222 BCL11BQ9C0K0 894 aaPredicted RBP5.91□□□□□ -1.46
RNU6-561P-201ENST00000516222 STK24Q9Y6E0 443 aa5.91□□□□□ -1.46
RNU6-561P-201ENST00000516222 ZNF316A6NFI3 1004 aaPredicted RBP5.9□□□□□ -1.46
RNU6-561P-201ENST00000516222 MS4A4AQ96JQ5 239 aa5.9□□□□□ -1.46
RNU6-561P-201ENST00000516222 RNF25Q96BH1 459 aaPredicted RBP5.89□□□□□ -1.47
RNU6-561P-201ENST00000516222 STK25O00506 426 aa5.88□□□□□ -1.47
RNU6-561P-201ENST00000516222 PBX2P40425 430 aa5.88□□□□□ -1.47
RNU6-561P-201ENST00000516222 TMC2Q8TDI7 906 aa5.88□□□□□ -1.47
RNU6-561P-201ENST00000516222 LSM11P83369 360 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU6-561P-201ENST00000516222 PSDA5PKW4 1024 aaPredicted RBP5.85□□□□□ -1.47
RNU6-561P-201ENST00000516222 ECM2O94769 699 aaPredicted RBP5.85□□□□□ -1.47
RNU6-561P-201ENST00000516222 FBXO22Q8NEZ5 403 aa5.85□□□□□ -1.47
RNU6-561P-201ENST00000516222 C2orf72A6NCS6 295 aa5.84□□□□□ -1.47
RNU6-561P-201ENST00000516222 SLC34A2O95436 690 aa5.83□□□□□ -1.48
RNU6-561P-201ENST00000516222 NUDT7P0C024 238 aa5.83□□□□□ -1.48
RNU6-561P-201ENST00000516222 KHSRPQ92945 711 aaKnown RBP eCLIP5.83□□□□□ -1.48
RNU6-561P-201ENST00000516222 STAC3Q96MF2 364 aa5.83□□□□□ -1.48
RNU6-561P-201ENST00000516222 MFRPQ9BY79 579 aa5.82□□□□□ -1.48
RNU6-561P-201ENST00000516222 HCSTQ9UBK5 93 aa5.82□□□□□ -1.48
RNU6-561P-201ENST00000516222 PCDHGA4Q9Y5G9 962 aa5.82□□□□□ -1.48
RNU6-561P-201ENST00000516222 KCNH8Q96L42 1107 aa5.81□□□□□ -1.48
RNU6-561P-201ENST00000516222 LHX6Q9UPM6 363 aa5.81□□□□□ -1.48
RNU6-561P-201ENST00000516222 ARHGAP33O14559 1287 aa5.8□□□□□ -1.48
RNU6-561P-201ENST00000516222 KIF3CO14782 793 aa5.8□□□□□ -1.48
RNU6-561P-201ENST00000516222 TBC1D12O60347 775 aa5.8□□□□□ -1.48
RNU6-561P-201ENST00000516222 PLA2G2EQ9NZK7 142 aa5.78□□□□□ -1.48
RNU6-561P-201ENST00000516222 AXIN2Q9Y2T1 843 aa5.77□□□□□ -1.49
RNU6-561P-201ENST00000516222 ADGRD1Q6QNK2 874 aa5.76□□□□□ -1.49
RNU6-561P-201ENST00000516222 TK2O00142 265 aa5.75□□□□□ -1.49
RNU6-561P-201ENST00000516222 PPP4R3BQ5MIZ7 849 aa5.75□□□□□ -1.49
RNU6-561P-201ENST00000516222 PTCD2Q8WV60 388 aaKnown RBP5.74□□□□□ -1.49
RNU6-561P-201ENST00000516222 RGL2O15211 777 aa5.72□□□□□ -1.49
RNU6-561P-201ENST00000516222 FOXK1P85037 733 aa5.72□□□□□ -1.49
RNU6-561P-201ENST00000516222 RYDENQ9NUL5 291 aaKnown RBP5.72□□□□□ -1.49
RNU6-561P-201ENST00000516222 PLPP6Q8IY26 295 aa5.71□□□□□ -1.5
RNU6-561P-201ENST00000516222 GPHNQ9NQX3 736 aaPredicted RBP5.71□□□□□ -1.5
RNU6-561P-201ENST00000516222 PKD2Q13563 968 aa5.7□□□□□ -1.5
RNU6-561P-201ENST00000516222 POTEEQ6S8J3 1075 aa5.7□□□□□ -1.5
RNU6-561P-201ENST00000516222 PPP1R37O75864 691 aa5.69□□□□□ -1.5
RNU6-561P-201ENST00000516222 KCTD12Q96CX2 325 aaKnown RBP5.69□□□□□ -1.5
RNU6-561P-201ENST00000516222 GOLGA8CPA6NN73 597 aa5.68□□□□□ -1.5
RNU6-561P-201ENST00000516222 PSEN2P49810 448 aa5.68□□□□□ -1.5
RNU6-561P-201ENST00000516222 HRO43593 1189 aa5.67□□□□□ -1.5
RNU6-561P-201ENST00000516222 KCNK17Q96T54 332 aa5.67□□□□□ -1.5
RNU6-561P-201ENST00000516222 DMRTA1Q5VZB9 504 aa5.66□□□□□ -1.5
RNU6-561P-201ENST00000516222 KDM4FA0A1W2PPD8 638 aa5.65□□□□□ -1.5
RNU6-561P-201ENST00000516222 DSG2Q14126 1118 aa5.65□□□□□ -1.5
RNU6-561P-201ENST00000516222 HS6ST3Q8IZP7 471 aa5.65□□□□□ -1.5
RNU6-561P-201ENST00000516222 RGS20O76081 388 aa5.64□□□□□ -1.51
RNU6-561P-201ENST00000516222 CHGAP10645 457 aaKnown RBP5.64□□□□□ -1.51
RNU6-561P-201ENST00000516222 PTPN5P54829 565 aa5.64□□□□□ -1.51
RNU6-561P-201ENST00000516222 ZNF454Q8N9F8 522 aa5.64□□□□□ -1.51
RNU6-561P-201ENST00000516222 PTPREP23469 700 aa5.63□□□□□ -1.51
RNU6-561P-201ENST00000516222 VPS9D1Q9Y2B5 631 aa5.63□□□□□ -1.51
RNU6-561P-201ENST00000516222 PDE4AP27815 886 aa5.62□□□□□ -1.51
RNU6-561P-201ENST00000516222 MRPL50Q8N5N7 158 aaKnown RBP5.62□□□□□ -1.51
RNU6-561P-201ENST00000516222 UPF1Q92900 1129 aaKnown RBP eCLIP5.62□□□□□ -1.51
RNU6-561P-201ENST00000516222 SLC4A5Q9BY07 1137 aa5.62□□□□□ -1.51
RNU6-561P-201ENST00000516222 OXER1Q8TDS5 423 aa5.61□□□□□ -1.51
RNU6-561P-201ENST00000516222 NBPF3Q9H094 633 aa5.61□□□□□ -1.51
RNU6-561P-201ENST00000516222 BCL2L12Q9HB09 334 aa5.61□□□□□ -1.51
RNU6-561P-201ENST00000516222 PPP1R15BQ5SWA1 713 aa5.59□□□□□ -1.51
RNU6-561P-201ENST00000516222 IFFO2Q5TF58 517 aa5.59□□□□□ -1.51
RNU6-561P-201ENST00000516222 WNT2BQ93097 391 aa5.59□□□□□ -1.51
RNU6-561P-201ENST00000516222 MAP3K9P80192 1104 aa5.58□□□□□ -1.52
RNU6-561P-201ENST00000516222 IRX2Q9BZI1 471 aaPredicted RBP5.58□□□□□ -1.52
RNU6-561P-201ENST00000516222 FOSBP53539 338 aa5.57□□□□□ -1.52
RNU6-561P-201ENST00000516222 THSD4Q6ZMP0 1018 aa5.57□□□□□ -1.52
RNU6-561P-201ENST00000516222 ZDHHC16Q969W1 377 aa5.57□□□□□ -1.52
RNU6-561P-201ENST00000516222 EVI5O60447 810 aa5.56□□□□□ -1.52
RNU6-561P-201ENST00000516222 JPH4Q96JJ6 628 aa5.56□□□□□ -1.52
RNU6-561P-201ENST00000516222 BHMG1C9JSJ3 638 aaPredicted RBP5.55□□□□□ -1.52
RNU6-561P-201ENST00000516222 ZBED2Q9BTP6 218 aa5.55□□□□□ -1.52
RNU6-561P-201ENST00000516222 CRISPLD2Q9H0B8 497 aa5.55□□□□□ -1.52
RNU6-561P-201ENST00000516222 DNAJC5Q9H3Z4 198 aa5.55□□□□□ -1.52
RNU6-561P-201ENST00000516222 ANO8Q9HCE9 1232 aaPredicted RBP5.55□□□□□ -1.52
RNU6-561P-201ENST00000516222 ANKK1Q8NFD2 765 aa5.54□□□□□ -1.52
RNU6-561P-201ENST00000516222 DDX27Q96GQ7 796 aaKnown RBP5.54□□□□□ -1.52
RNU6-561P-201ENST00000516222 NYAP1Q6ZVC0 841 aa5.53□□□□□ -1.52
RNU6-561P-201ENST00000516222 LARP6Q9BRS8 491 aaKnown RBP5.53□□□□□ -1.52
RNU6-561P-201ENST00000516222 A0A0G2JS52 829 aa5.52□□□□□ -1.53
RNU6-561P-201ENST00000516222 FBXW7Q969H0 707 aa5.52□□□□□ -1.53
RNU6-561P-201ENST00000516222 RABGEF1Q9UJ41 708 aa5.52□□□□□ -1.53
RNU6-561P-201ENST00000516222 PPP1R3GB7ZBB8 358 aa5.51□□□□□ -1.53
RNU6-561P-201ENST00000516222 LAPTM4BQ86VI4 370 aa5.5□□□□□ -1.53
RNU6-561P-201ENST00000516222 ADAM33Q9BZ11 813 aa5.5□□□□□ -1.53
RNU6-561P-201ENST00000516222 NKX1-1Q15270 411 aaPredicted RBP5.49□□□□□ -1.53
RNU6-561P-201ENST00000516222 TYW1BQ6NUM6 668 aa5.49□□□□□ -1.53
RNU6-561P-201ENST00000516222 NCKAP5LQ9HCH0 1330 aa5.48□□□□□ -1.53
RNU6-561P-201ENST00000516222 ONECUT3O60422 494 aaPredicted RBP5.48□□□□□ -1.53
RNU6-561P-201ENST00000516222 PHF14O94880 888 aa5.47□□□□□ -1.53
RNU6-561P-201ENST00000516222 KCNC4Q03721 635 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms