RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 HS3ST6Q96QI5 342 aa6.57□□□□□ -1.36
SNORA40.9-201ENST00000515895 PPP1R37O75864 691 aa6.56□□□□□ -1.36
SNORA40.9-201ENST00000515895 DOK7Q18PE1 504 aa6.56□□□□□ -1.36
SNORA40.9-201ENST00000515895 HOXB1P14653 301 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.9-201ENST00000515895 CHGAP10645 457 aaKnown RBP6.53□□□□□ -1.36
SNORA40.9-201ENST00000515895 HS6ST3Q8IZP7 471 aa6.53□□□□□ -1.36
SNORA40.9-201ENST00000515895 C2orf72A6NCS6 295 aa6.52□□□□□ -1.37
SNORA40.9-201ENST00000515895 RIMBP2O15034 1052 aa6.52□□□□□ -1.37
SNORA40.9-201ENST00000515895 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
SNORA40.9-201ENST00000515895 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
SNORA40.9-201ENST00000515895 ERBB3P21860 1342 aa6.5□□□□□ -1.37
SNORA40.9-201ENST00000515895 KIF3CO14782 793 aa6.5□□□□□ -1.37
SNORA40.9-201ENST00000515895 GPR153Q6NV75 609 aa6.5□□□□□ -1.37
SNORA40.9-201ENST00000515895 KHSRPQ92945 711 aaKnown RBP eCLIP6.5□□□□□ -1.37
SNORA40.9-201ENST00000515895 NKX1-1Q15270 411 aaPredicted RBP6.49□□□□□ -1.37
SNORA40.9-201ENST00000515895 ARSIQ5FYB1 569 aa6.49□□□□□ -1.37
SNORA40.9-201ENST00000515895 VARS2Q5ST30 1063 aaKnown RBP6.49□□□□□ -1.37
SNORA40.9-201ENST00000515895 AMER1Q5JTC6 1135 aaPredicted RBP6.48□□□□□ -1.37
SNORA40.9-201ENST00000515895 SPNS2Q8IVW8 549 aa6.48□□□□□ -1.37
SNORA40.9-201ENST00000515895 TMC2Q8TDI7 906 aa6.47□□□□□ -1.37
SNORA40.9-201ENST00000515895 ZSWIM6Q9HCJ5 1215 aa6.47□□□□□ -1.37
SNORA40.9-201ENST00000515895 DCAF8L2P0C7V8 631 aa6.46□□□□□ -1.38
SNORA40.9-201ENST00000515895 MMRN1Q13201 1228 aa6.46□□□□□ -1.38
SNORA40.9-201ENST00000515895 DNAJC5Q9H3Z4 198 aa6.44□□□□□ -1.38
SNORA40.9-201ENST00000515895 NUDT7P0C024 238 aa6.43□□□□□ -1.38
SNORA40.9-201ENST00000515895 RTN4Q9NQC3 1192 aaKnown RBP6.43□□□□□ -1.38
SNORA40.9-201ENST00000515895 ZNF316A6NFI3 1004 aaPredicted RBP6.42□□□□□ -1.38
SNORA40.9-201ENST00000515895 PCDHGA4Q9Y5G9 962 aa6.42□□□□□ -1.38
SNORA40.9-201ENST00000515895 ZNF687Q8N1G0 1237 aa6.4□□□□□ -1.38
SNORA40.9-201ENST00000515895 RYDENQ9NUL5 291 aaKnown RBP6.4□□□□□ -1.38
SNORA40.9-201ENST00000515895 SLC34A2O95436 690 aa6.39□□□□□ -1.39
SNORA40.9-201ENST00000515895 DSG2Q14126 1118 aa6.39□□□□□ -1.39
SNORA40.9-201ENST00000515895 PLPP6Q8IY26 295 aa6.39□□□□□ -1.39
SNORA40.9-201ENST00000515895 GPHNQ9NQX3 736 aaPredicted RBP6.39□□□□□ -1.39
SNORA40.9-201ENST00000515895 LHX6Q9UPM6 363 aa6.39□□□□□ -1.39
SNORA40.9-201ENST00000515895 FOXK1P85037 733 aa6.38□□□□□ -1.39
SNORA40.9-201ENST00000515895 GTPBP6O43824 516 aaPredicted RBP6.37□□□□□ -1.39
SNORA40.9-201ENST00000515895 AXIN2Q9Y2T1 843 aa6.35□□□□□ -1.39
SNORA40.9-201ENST00000515895 NCKAP5LQ9HCH0 1330 aa6.34□□□□□ -1.39
SNORA40.9-201ENST00000515895 POTEEQ6S8J3 1075 aa6.34□□□□□ -1.39
SNORA40.9-201ENST00000515895 ANKRD13DQ6ZTN6 518 aa6.34□□□□□ -1.39
SNORA40.9-201ENST00000515895 PTCD2Q8WV60 388 aaKnown RBP6.34□□□□□ -1.39
SNORA40.9-201ENST00000515895 CRISPLD2Q9H0B8 497 aa6.34□□□□□ -1.39
SNORA40.9-201ENST00000515895 KDM4FA0A1W2PPD8 638 aa6.33□□□□□ -1.4
SNORA40.9-201ENST00000515895 UPF1Q92900 1129 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNORA40.9-201ENST00000515895 PPP1R15BQ5SWA1 713 aa6.32□□□□□ -1.4
SNORA40.9-201ENST00000515895 LSM11P83369 360 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNORA40.9-201ENST00000515895 RNF166Q96A37 237 aaPredicted RBP6.31□□□□□ -1.4
SNORA40.9-201ENST00000515895 BBXQ8WY36 941 aaPredicted RBP6.3□□□□□ -1.4
SNORA40.9-201ENST00000515895 MYT1LQ9UL68 1186 aa6.3□□□□□ -1.4
SNORA40.9-201ENST00000515895 PDE4AP27815 886 aa6.29□□□□□ -1.4
SNORA40.9-201ENST00000515895 CADPS2Q86UW7 1296 aa6.29□□□□□ -1.4
SNORA40.9-201ENST00000515895 OXER1Q8TDS5 423 aa6.29□□□□□ -1.4
SNORA40.9-201ENST00000515895 LARP6Q9BRS8 491 aaKnown RBP6.29□□□□□ -1.4
SNORA40.9-201ENST00000515895 PBX2P40425 430 aa6.28□□□□□ -1.4
SNORA40.9-201ENST00000515895 TBC1D12O60347 775 aa6.27□□□□□ -1.41
SNORA40.9-201ENST00000515895 PSEN2P49810 448 aa6.27□□□□□ -1.41
SNORA40.9-201ENST00000515895 DDX27Q96GQ7 796 aaKnown RBP6.27□□□□□ -1.41
SNORA40.9-201ENST00000515895 DMRTA1Q5VZB9 504 aa6.26□□□□□ -1.41
SNORA40.9-201ENST00000515895 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.26□□□□□ -1.41
SNORA40.9-201ENST00000515895 PSDA5PKW4 1024 aaPredicted RBP6.25□□□□□ -1.41
SNORA40.9-201ENST00000515895 ARHGAP33O14559 1287 aa6.25□□□□□ -1.41
SNORA40.9-201ENST00000515895 PPP4R3BQ5MIZ7 849 aa6.25□□□□□ -1.41
SNORA40.9-201ENST00000515895 PTGER2P43116 358 aa6.24□□□□□ -1.41
SNORA40.9-201ENST00000515895 MFSD10Q14728 455 aa6.24□□□□□ -1.41
SNORA40.9-201ENST00000515895 ZNF454Q8N9F8 522 aa6.24□□□□□ -1.41
SNORA40.9-201ENST00000515895 ADGRD1Q6QNK2 874 aa6.23□□□□□ -1.41
SNORA40.9-201ENST00000515895 SPRYD3Q8NCJ5 442 aa6.23□□□□□ -1.41
SNORA40.9-201ENST00000515895 KCNK17Q96T54 332 aa6.23□□□□□ -1.41
SNORA40.9-201ENST00000515895 EMILIN3Q9NT22 766 aa6.23□□□□□ -1.41
SNORA40.9-201ENST00000515895 EVI5O60447 810 aa6.22□□□□□ -1.41
SNORA40.9-201ENST00000515895 MAP3K9P80192 1104 aa6.2□□□□□ -1.42
SNORA40.9-201ENST00000515895 PAXIP1Q6ZW49 1069 aaPredicted RBP6.2□□□□□ -1.42
SNORA40.9-201ENST00000515895 FOSBP53539 338 aa6.19□□□□□ -1.42
SNORA40.9-201ENST00000515895 HRO43593 1189 aa6.18□□□□□ -1.42
SNORA40.9-201ENST00000515895 CFAP44Q96MT7 982 aa6.18□□□□□ -1.42
SNORA40.9-201ENST00000515895 ANO8Q9HCE9 1232 aaPredicted RBP6.18□□□□□ -1.42
SNORA40.9-201ENST00000515895 TK2O00142 265 aa6.17□□□□□ -1.42
SNORA40.9-201ENST00000515895 JPH4Q96JJ6 628 aa6.17□□□□□ -1.42
SNORA40.9-201ENST00000515895 ADAM33Q9BZ11 813 aa6.17□□□□□ -1.42
SNORA40.9-201ENST00000515895 BCL2L12Q9HB09 334 aa6.17□□□□□ -1.42
SNORA40.9-201ENST00000515895 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
SNORA40.9-201ENST00000515895 DPYSL4O14531 572 aa6.15□□□□□ -1.42
SNORA40.9-201ENST00000515895 PTPREP23469 700 aa6.15□□□□□ -1.42
SNORA40.9-201ENST00000515895 CAMK2BQ13554 666 aa6.15□□□□□ -1.42
SNORA40.9-201ENST00000515895 ZDHHC16Q969W1 377 aa6.15□□□□□ -1.42
SNORA40.9-201ENST00000515895 VPS9D1Q9Y2B5 631 aa6.15□□□□□ -1.42
SNORA40.9-201ENST00000515895 PCDHGA10Q9Y5H3 936 aa6.15□□□□□ -1.42
SNORA40.9-201ENST00000515895 KCTD12Q96CX2 325 aaKnown RBP6.14□□□□□ -1.43
SNORA40.9-201ENST00000515895 ZBED2Q9BTP6 218 aa6.13□□□□□ -1.43
SNORA40.9-201ENST00000515895 STAC3Q96MF2 364 aa6.12□□□□□ -1.43
SNORA40.9-201ENST00000515895 PHF14O94880 888 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 COL9A1P20849 921 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 PROX2Q3B8N5 592 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 TYW1BQ6NUM6 668 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 DDX12PQ92771 950 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 SLC4A5Q9BY07 1137 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 HCSTQ9UBK5 93 aa6.1□□□□□ -1.43
SNORA40.9-201ENST00000515895 BHMG1C9JSJ3 638 aaPredicted RBP6.09□□□□□ -1.43
SNORA40.9-201ENST00000515895 PPP1R3GB7ZBB8 358 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms