RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 HFM1A2PYH4 1435 aa15.25■□□□□ 0.03
CDK18-222ENST00000515494 GPATCH8Q9UKJ3 1502 aaKnown RBP15.24■□□□□ 0.03
CDK18-222ENST00000515494 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
CDK18-222ENST00000515494 ABCC2Q92887 1545 aa15.23■□□□□ 0.03
CDK18-222ENST00000515494 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
CDK18-222ENST00000515494 TCOF1Q13428 1488 aaKnown RBP15.22■□□□□ 0.03
CDK18-222ENST00000515494 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
CDK18-222ENST00000515494 CYB5RLQ6IPT4 315 aa15.2■□□□□ 0.02
CDK18-222ENST00000515494 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
CDK18-222ENST00000515494 ABCC5O15440 1437 aa15.17■□□□□ 0.02
CDK18-222ENST00000515494 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
CDK18-222ENST00000515494 DAPK1P53355 1430 aa15.16■□□□□ 0.02
CDK18-222ENST00000515494 ABCC10Q5T3U5 1492 aa15.16■□□□□ 0.02
CDK18-222ENST00000515494 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDK18-222ENST00000515494 KDM6BO15054 1643 aa15.16■□□□□ 0.02
CDK18-222ENST00000515494 MIER1Q8N108 512 aa15.15■□□□□ 0.02
CDK18-222ENST00000515494 ZCCHC11Q5TAX3 1644 aaKnown RBP15.14■□□□□ 0.02
CDK18-222ENST00000515494 FOXD1Q16676 465 aa15.14■□□□□ 0.01
CDK18-222ENST00000515494 ADCY10Q96PN6 1610 aa15.13■□□□□ 0.01
CDK18-222ENST00000515494 CDC42BPAQ5VT25 1732 aa15.13■□□□□ 0.01
CDK18-222ENST00000515494 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
CDK18-222ENST00000515494 KDM5BQ9UGL1 1544 aa15.11■□□□□ 0.01
CDK18-222ENST00000515494 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
CDK18-222ENST00000515494 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
CDK18-222ENST00000515494 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
CDK18-222ENST00000515494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDK18-222ENST00000515494 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
CDK18-222ENST00000515494 ITSN2Q9NZM3 1697 aa15.1■□□□□ 0.01
CDK18-222ENST00000515494 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
CDK18-222ENST00000515494 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
CDK18-222ENST00000515494 MPHOSPH9Q99550 1183 aa15.08■□□□□ 0
CDK18-222ENST00000515494 TONSLQ96HA7 1378 aa15.08■□□□□ 0
CDK18-222ENST00000515494 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
CDK18-222ENST00000515494 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
CDK18-222ENST00000515494 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
CDK18-222ENST00000515494 GCC2Q8IWJ2 1684 aa15.07■□□□□ 0
CDK18-222ENST00000515494 DENND4BO75064 1496 aaPredicted RBP15.06■□□□□ 0
CDK18-222ENST00000515494 ASXL2Q76L83 1435 aa15.06■□□□□ 0
CDK18-222ENST00000515494 AKNAQ7Z591 1439 aa15.06■□□□□ 0
CDK18-222ENST00000515494 CDC42BPBQ9Y5S2 1711 aa15.05■□□□□ -0
CDK18-222ENST00000515494 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
CDK18-222ENST00000515494 ROCK1Q13464 1354 aa15.04■□□□□ -0
CDK18-222ENST00000515494 AFAP1Q8N556 730 aa15.03■□□□□ -0
CDK18-222ENST00000515494 NCOA1Q15788 1441 aa15.03■□□□□ -0
CDK18-222ENST00000515494 WDR7Q9Y4E6 1490 aa15.03■□□□□ -0
CDK18-222ENST00000515494 SAMD9LQ8IVG5 1584 aa15.03■□□□□ -0
CDK18-222ENST00000515494 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
CDK18-222ENST00000515494 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
CDK18-222ENST00000515494 SYCP2Q9BX26 1530 aa15.02■□□□□ -0
CDK18-222ENST00000515494 ANKRD30AQ9BXX3 1397 aa15.02■□□□□ -0
CDK18-222ENST00000515494 TIMELESSQ9UNS1 1208 aa15.02□□□□□ -0.01
CDK18-222ENST00000515494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.015e-8■■□□□ 13.2
CDK18-222ENST00000515494 PREX2Q70Z35 1606 aa15□□□□□ -0.01
CDK18-222ENST00000515494 PLCH2O75038 1416 aa15□□□□□ -0.01
CDK18-222ENST00000515494 MBD5Q9P267 1494 aa15□□□□□ -0.01
CDK18-222ENST00000515494 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
CDK18-222ENST00000515494 MYO5CQ9NQX4 1742 aa14.98□□□□□ -0.01
CDK18-222ENST00000515494 ARHGEF12Q9NZN5 1544 aa14.98□□□□□ -0.01
CDK18-222ENST00000515494 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
CDK18-222ENST00000515494 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.01
CDK18-222ENST00000515494 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
CDK18-222ENST00000515494 DDX10Q13206 875 aaKnown RBP14.95□□□□□ -0.02
CDK18-222ENST00000515494 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
CDK18-222ENST00000515494 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
CDK18-222ENST00000515494 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
CDK18-222ENST00000515494 NUP155O75694 1391 aa14.94□□□□□ -0.02
CDK18-222ENST00000515494 PKD2Q13563 968 aa14.94□□□□□ -0.02
CDK18-222ENST00000515494 L3MBTL2Q969R5 705 aa14.94□□□□□ -0.02
CDK18-222ENST00000515494 ANP32EQ9BTT0 268 aa14.93□□□□□ -0.02
CDK18-222ENST00000515494 FANCAO15360 1455 aa14.93□□□□□ -0.02
CDK18-222ENST00000515494 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
CDK18-222ENST00000515494 ANKRD30BQ9BXX2 1392 aa14.92□□□□□ -0.02
CDK18-222ENST00000515494 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
CDK18-222ENST00000515494 CROCC2H7BZ55 1655 aa14.92□□□□□ -0.02
CDK18-222ENST00000515494 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
CDK18-222ENST00000515494 PZPP20742 1482 aa14.91□□□□□ -0.02
CDK18-222ENST00000515494 ADGBQ8N7X0 1667 aa14.91□□□□□ -0.02
CDK18-222ENST00000515494 SCAPERQ9BY12 1400 aa14.9□□□□□ -0.02
CDK18-222ENST00000515494 CD109Q6YHK3 1445 aa14.9□□□□□ -0.02
CDK18-222ENST00000515494 FAM69CQ0P6D2 419 aa14.89□□□□□ -0.03
CDK18-222ENST00000515494 ARHGEF5Q12774 1597 aa14.88□□□□□ -0.03
CDK18-222ENST00000515494 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
CDK18-222ENST00000515494 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
CDK18-222ENST00000515494 ADGRL1O94910 1474 aa14.87□□□□□ -0.03
CDK18-222ENST00000515494 SHANK2Q9UPX8 1470 aa14.87□□□□□ -0.03
CDK18-222ENST00000515494 PLEKHH2Q8IVE3 1493 aa14.87□□□□□ -0.03
CDK18-222ENST00000515494 ABCC1P33527 1531 aa14.86□□□□□ -0.03
CDK18-222ENST00000515494 ZNF326Q5BKZ1 582 aaKnown RBP14.85□□□□□ -0.03
CDK18-222ENST00000515494 ABCA9Q8IUA7 1624 aa14.85□□□□□ -0.03
CDK18-222ENST00000515494 NBPF8Q3BBV2 869 aa14.85□□□□□ -0.03
CDK18-222ENST00000515494 RPRD2Q5VT52 1461 aaKnown RBP14.84□□□□□ -0.03
CDK18-222ENST00000515494 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
CDK18-222ENST00000515494 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
CDK18-222ENST00000515494 KIF3BO15066 747 aa14.82□□□□□ -0.04
CDK18-222ENST00000515494 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
CDK18-222ENST00000515494 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
CDK18-222ENST00000515494 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
CDK18-222ENST00000515494 EIF4G2P78344 907 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDK18-222ENST00000515494 TSPOAP1O95153 1857 aa14.76□□□□□ -0.05
CDK18-222ENST00000515494 GGT6Q6P531 493 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms