RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
SNX2-213ENST00000514949 ADCY10Q96PN6 1610 aa24.6■■□□□ 1.53
SNX2-213ENST00000514949 RPRD2Q5VT52 1461 aaKnown RBP24.59■■□□□ 1.53
SNX2-213ENST00000514949 ARID3CA6NKF2 412 aa24.58■■□□□ 1.52
SNX2-213ENST00000514949 ITSN2Q9NZM3 1697 aa24.58■■□□□ 1.52
SNX2-213ENST00000514949 NUP160Q12769 1436 aa24.57■■□□□ 1.52
SNX2-213ENST00000514949 HSPA5P11021 654 aaKnown RBP24.55■■□□□ 1.52
SNX2-213ENST00000514949 L3MBTL2Q969R5 705 aa24.55■■□□□ 1.52
SNX2-213ENST00000514949 EIF4G2P78344 907 aaKnown RBP eCLIP24.54■■□□□ 1.522e-6■■■■■ 26.9
SNX2-213ENST00000514949 WASHC2AQ641Q2 1341 aa24.54■■□□□ 1.52
SNX2-213ENST00000514949 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
SNX2-213ENST00000514949 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
SNX2-213ENST00000514949 PRG4Q92954 1404 aaPredicted RBP24.53■■□□□ 1.52
SNX2-213ENST00000514949 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
SNX2-213ENST00000514949 GPATCH8Q9UKJ3 1502 aaKnown RBP24.53■■□□□ 1.52
SNX2-213ENST00000514949 ADGRL2O95490 1459 aa24.53■■□□□ 1.52
SNX2-213ENST00000514949 CAMSAP2Q08AD1 1489 aa24.52■■□□□ 1.52
SNX2-213ENST00000514949 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
SNX2-213ENST00000514949 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
SNX2-213ENST00000514949 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
SNX2-213ENST00000514949 ADGBQ8N7X0 1667 aa24.51■■□□□ 1.51
SNX2-213ENST00000514949 NCOA1Q15788 1441 aa24.5■■□□□ 1.51
SNX2-213ENST00000514949 CROCC2H7BZ55 1655 aa24.47■■□□□ 1.51
SNX2-213ENST00000514949 PZPP20742 1482 aa24.46■■□□□ 1.51
SNX2-213ENST00000514949 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
SNX2-213ENST00000514949 KIF14Q15058 1648 aa24.45■■□□□ 1.5
SNX2-213ENST00000514949 JPH4Q96JJ6 628 aa24.45■■□□□ 1.5
SNX2-213ENST00000514949 FOXD1Q16676 465 aa24.44■■□□□ 1.5
SNX2-213ENST00000514949 CNTLNQ9NXG0 1405 aa24.44■■□□□ 1.5
SNX2-213ENST00000514949 SLC4A1APQ9BWU0 796 aaKnown RBP24.43■■□□□ 1.5
SNX2-213ENST00000514949 ABCA8O94911 1581 aa24.43■■□□□ 1.5
SNX2-213ENST00000514949 SPATA31E1Q6ZUB1 1445 aa24.43■■□□□ 1.5
SNX2-213ENST00000514949 MYT1Q01538 1121 aa24.41■■□□□ 1.5
SNX2-213ENST00000514949 CCDC7Q96M83 1385 aa24.4■■□□□ 1.5
SNX2-213ENST00000514949 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
SNX2-213ENST00000514949 POLR1AO95602 1720 aaPredicted RBP24.39■■□□□ 1.49
SNX2-213ENST00000514949 FKBP8Q14318 412 aa24.38■■□□□ 1.49
SNX2-213ENST00000514949 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
SNX2-213ENST00000514949 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
SNX2-213ENST00000514949 ANKRD30AQ9BXX3 1397 aa24.37■■□□□ 1.49
SNX2-213ENST00000514949 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
SNX2-213ENST00000514949 MBD5Q9P267 1494 aa24.37■■□□□ 1.49
SNX2-213ENST00000514949 TSHZ2Q9NRE2 1034 aa24.35■■□□□ 1.49
SNX2-213ENST00000514949 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
SNX2-213ENST00000514949 NEFLP07196 543 aa24.34■■□□□ 1.49
SNX2-213ENST00000514949 ATP10BO94823 1461 aa24.33■■□□□ 1.49
SNX2-213ENST00000514949 C11orf95C9JLR9 678 aaPredicted RBP24.33■■□□□ 1.49
SNX2-213ENST00000514949 PLEKHD1A6NEE1 506 aa24.31■■□□□ 1.48
SNX2-213ENST00000514949 ANKRD50Q9ULJ7 1429 aa24.3■■□□□ 1.48
SNX2-213ENST00000514949 FBLN2P98095 1184 aa24.3■■□□□ 1.48
SNX2-213ENST00000514949 KDM5DQ9BY66 1539 aa24.28■■□□□ 1.48
SNX2-213ENST00000514949 PRKRIP1Q9H875 184 aaPredicted RBP24.28■■□□□ 1.48
SNX2-213ENST00000514949 ARHGEF5Q12774 1597 aa24.25■■□□□ 1.47
SNX2-213ENST00000514949 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
SNX2-213ENST00000514949 C9orf84Q5VXU9 1444 aa24.24■■□□□ 1.47
SNX2-213ENST00000514949 KIF7Q2M1P5 1343 aa24.24■■□□□ 1.47
SNX2-213ENST00000514949 HNRNPUQ00839 825 aaKnown RBP eCLIP24.24■■□□□ 1.47
SNX2-213ENST00000514949 UHRF1BP1Q6BDS2 1440 aa24.23■■□□□ 1.47
SNX2-213ENST00000514949 PKD2Q13563 968 aa24.22■■□□□ 1.47
SNX2-213ENST00000514949 BCANQ96GW7 911 aa24.2■■□□□ 1.47
SNX2-213ENST00000514949 PTPRGP23470 1445 aa24.2■■□□□ 1.46
SNX2-213ENST00000514949 ARID4BQ4LE39 1312 aaPredicted RBP24.19■■□□□ 1.46
SNX2-213ENST00000514949 ARHGEF12Q9NZN5 1544 aa24.19■■□□□ 1.46
SNX2-213ENST00000514949 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
SNX2-213ENST00000514949 KDM5CP41229 1560 aa24.15■■□□□ 1.46
SNX2-213ENST00000514949 NUP155O75694 1391 aa24.15■■□□□ 1.46
SNX2-213ENST00000514949 TSPY4P0CV99 314 aa24.14■■□□□ 1.46
SNX2-213ENST00000514949 TSPY10P0CW01 314 aa24.14■■□□□ 1.46
SNX2-213ENST00000514949 RALGAPBQ86X10 1494 aa24.14■■□□□ 1.45
SNX2-213ENST00000514949 USP47Q96K76 1375 aa24.14■■□□□ 1.45
SNX2-213ENST00000514949 RSPH4AQ5TD94 716 aa24.12■■□□□ 1.45
SNX2-213ENST00000514949 ERICH6BQ5W0A0 696 aa24.12■■□□□ 1.45
SNX2-213ENST00000514949 PREX2Q70Z35 1606 aa24.12■■□□□ 1.45
SNX2-213ENST00000514949 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
SNX2-213ENST00000514949 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
SNX2-213ENST00000514949 KIF15Q9NS87 1388 aa24.11■■□□□ 1.45
SNX2-213ENST00000514949 CDC42BPBQ9Y5S2 1711 aa24.09■■□□□ 1.45
SNX2-213ENST00000514949 CCDC141Q6ZP82 1450 aa24.09■■□□□ 1.45
SNX2-213ENST00000514949 ZBED9Q6R2W3 1325 aa24.09■■□□□ 1.45
SNX2-213ENST00000514949 SAMD9LQ8IVG5 1584 aa24.09■■□□□ 1.45
SNX2-213ENST00000514949 MRS2Q9HD23 443 aa24.08■■□□□ 1.45
SNX2-213ENST00000514949 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
SNX2-213ENST00000514949 ROCK2O75116 1388 aaKnown RBP24.05■■□□□ 1.44
SNX2-213ENST00000514949 MAST1Q9Y2H9 1570 aa24.05■■□□□ 1.44
SNX2-213ENST00000514949 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
SNX2-213ENST00000514949 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
SNX2-213ENST00000514949 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
SNX2-213ENST00000514949 CHD1O14646 1710 aa23.99■■□□□ 1.43
SNX2-213ENST00000514949 UNC13BO14795 1591 aa23.97■■□□□ 1.43
SNX2-213ENST00000514949 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
SNX2-213ENST00000514949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.42
SNX2-213ENST00000514949 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
SNX2-213ENST00000514949 CARD11Q9BXL7 1154 aa23.94■■□□□ 1.42
SNX2-213ENST00000514949 PLXNC1O60486 1568 aa23.94■■□□□ 1.42
SNX2-213ENST00000514949 TTC37Q6PGP7 1564 aa23.94■■□□□ 1.42
SNX2-213ENST00000514949 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
SNX2-213ENST00000514949 SYCP2Q9BX26 1530 aa23.92■■□□□ 1.42
SNX2-213ENST00000514949 RBM19Q9Y4C8 960 aaKnown RBP23.92■■□□□ 1.42
SNX2-213ENST00000514949 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
SNX2-213ENST00000514949 ARHGAP5Q13017 1502 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms