RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
MATR3-225ENST00000514528 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
MATR3-225ENST00000514528 ATP10AO60312 1499 aa28.27■■■□□ 2.12
MATR3-225ENST00000514528 EFCAB2Q5VUJ9 269 aa28.25■■■□□ 2.11
MATR3-225ENST00000514528 C9orf84Q5VXU9 1444 aa28.24■■■□□ 2.11
MATR3-225ENST00000514528 TROQ12816 1431 aaPredicted RBP28.19■■■□□ 2.1
MATR3-225ENST00000514528 MLECQ14165 292 aa28.19■■■□□ 2.1
MATR3-225ENST00000514528 KDM5CP41229 1560 aa28.19■■■□□ 2.1
MATR3-225ENST00000514528 KIF14Q15058 1648 aa28.18■■■□□ 2.1
MATR3-225ENST00000514528 CDK11AQ9UQ88 783 aaPredicted RBP28.18■■■□□ 2.1
MATR3-225ENST00000514528 ZNF518AQ6AHZ1 1483 aa28.18■■■□□ 2.1
MATR3-225ENST00000514528 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
MATR3-225ENST00000514528 MYO5CQ9NQX4 1742 aa28.17■■■□□ 2.1
MATR3-225ENST00000514528 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
MATR3-225ENST00000514528 PLPPR3Q6T4P5 718 aa28.14■■■□□ 2.1
MATR3-225ENST00000514528 AFAP1Q8N556 730 aa28.11■■■□□ 2.09
MATR3-225ENST00000514528 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
MATR3-225ENST00000514528 REREQ9P2R6 1566 aa28.1■■■□□ 2.09
MATR3-225ENST00000514528 ATP1B4Q9UN42 357 aaPredicted RBP28.09■■■□□ 2.09
MATR3-225ENST00000514528 ARHGAP5Q13017 1502 aa28.08■■■□□ 2.09
MATR3-225ENST00000514528 CLIP1P30622 1438 aa28.08■■■□□ 2.09
MATR3-225ENST00000514528 MLH3Q9UHC1 1453 aa28.07■■■□□ 2.08
MATR3-225ENST00000514528 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
MATR3-225ENST00000514528 CEBPAP49715 358 aaPredicted RBP28.06■■■□□ 2.08
MATR3-225ENST00000514528 PREX1Q8TCU6 1659 aa28.06■■■□□ 2.08
MATR3-225ENST00000514528 LRRIQ1Q96JM4 1722 aa28.03■■■□□ 2.08
MATR3-225ENST00000514528 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
MATR3-225ENST00000514528 AGLP35573 1532 aa28.01■■■□□ 2.07
MATR3-225ENST00000514528 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
MATR3-225ENST00000514528 CASKIN1Q8WXD9 1431 aa27.99■■■□□ 2.07
MATR3-225ENST00000514528 TRAPPC8Q9Y2L5 1435 aa27.99■■■□□ 2.07
MATR3-225ENST00000514528 ABCA6Q8N139 1617 aa27.99■■■□□ 2.07
MATR3-225ENST00000514528 ABCC1P33527 1531 aa27.98■■■□□ 2.07
MATR3-225ENST00000514528 CDC42BPBQ9Y5S2 1711 aa27.98■■■□□ 2.07
MATR3-225ENST00000514528 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
MATR3-225ENST00000514528 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
MATR3-225ENST00000514528 CCDC18Q5T9S5 1454 aa27.95■■■□□ 2.07
MATR3-225ENST00000514528 STRCQ7RTU9 1775 aa27.95■■■□□ 2.06
MATR3-225ENST00000514528 DMRT2Q9Y5R5 561 aa27.94■■■□□ 2.06
MATR3-225ENST00000514528 PTPRTO14522 1441 aa27.89■■■□□ 2.06
MATR3-225ENST00000514528 SETD1BQ9UPS6 1966 aaKnown RBP27.88■■■□□ 2.05
MATR3-225ENST00000514528 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
MATR3-225ENST00000514528 C3P01024 1663 aa27.87■■■□□ 2.05
MATR3-225ENST00000514528 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
MATR3-225ENST00000514528 CNTLNQ9NXG0 1405 aa27.84■■■□□ 2.05
MATR3-225ENST00000514528 MYT1LQ9UL68 1186 aa27.84■■■□□ 2.05
MATR3-225ENST00000514528 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
MATR3-225ENST00000514528 SAMD9LQ8IVG5 1584 aa27.81■■■□□ 2.04
MATR3-225ENST00000514528 CDC42BPAQ5VT25 1732 aa27.8■■■□□ 2.04
MATR3-225ENST00000514528 GPATCH8Q9UKJ3 1502 aaKnown RBP27.79■■■□□ 2.04
MATR3-225ENST00000514528 NCOA1Q15788 1441 aa27.78■■■□□ 2.04
MATR3-225ENST00000514528 NPATQ14207 1427 aa27.77■■■□□ 2.04
MATR3-225ENST00000514528 LTBP4Q8N2S1 1624 aa27.77■■■□□ 2.04
MATR3-225ENST00000514528 ESF1Q9H501 851 aaKnown RBP27.75■■■□□ 2.03
MATR3-225ENST00000514528 KIAA1107Q9UPP5 1409 aa27.75■■■□□ 2.03
MATR3-225ENST00000514528 SYCP2Q9BX26 1530 aa27.73■■■□□ 2.03
MATR3-225ENST00000514528 MROH2AA6NES4 1674 aa27.71■■■□□ 2.03
MATR3-225ENST00000514528 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.03
MATR3-225ENST00000514528 PLXNC1O60486 1568 aa27.7■■■□□ 2.03
MATR3-225ENST00000514528 ZMYM3Q14202 1370 aa27.7■■■□□ 2.02
MATR3-225ENST00000514528 SPAG9O60271 1321 aaKnown RBP27.69■■■□□ 2.02
MATR3-225ENST00000514528 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.024e-9■■■■■ 28.9
MATR3-225ENST00000514528 INO80Q9ULG1 1556 aaPredicted RBP27.66■■■□□ 2.02
MATR3-225ENST00000514528 PLEKHH2Q8IVE3 1493 aa27.66■■■□□ 2.02
MATR3-225ENST00000514528 ZNF777Q9ULD5 760 aaPredicted RBP27.66■■■□□ 2.02
MATR3-225ENST00000514528 ATP7AQ04656 1500 aa27.66■■■□□ 2.02
MATR3-225ENST00000514528 A2MP01023 1474 aa27.63■■■□□ 2.01
MATR3-225ENST00000514528 CAMSAP1Q5T5Y3 1602 aa27.63■■■□□ 2.01
MATR3-225ENST00000514528 ILDR2Q71H61 639 aa27.61■■■□□ 2.01
MATR3-225ENST00000514528 CFDP1Q9UEE9 299 aaPredicted RBP27.61■■■□□ 2.01
MATR3-225ENST00000514528 DISP3Q9P2K9 1392 aa27.6■■■□□ 2.01
MATR3-225ENST00000514528 PTPRKQ15262 1439 aa27.6■■■□□ 2.01
MATR3-225ENST00000514528 CCNB3Q8WWL7 1395 aa27.59■■■□□ 2.01
MATR3-225ENST00000514528 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
MATR3-225ENST00000514528 PPP6R1Q9UPN7 881 aa27.56■■■□□ 2
MATR3-225ENST00000514528 TCOF1Q13428 1488 aaKnown RBP27.56■■■□□ 2
MATR3-225ENST00000514528 MBD5Q9P267 1494 aa27.56■■■□□ 2
MATR3-225ENST00000514528 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
MATR3-225ENST00000514528 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
MATR3-225ENST00000514528 NCKAP5LQ9HCH0 1330 aa27.53■■■□□ 2
MATR3-225ENST00000514528 CLTCQ00610 1675 aaKnown RBP27.52■■■□□ 2
MATR3-225ENST00000514528 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
MATR3-225ENST00000514528 PKD2Q13563 968 aa27.52■■■□□ 2
MATR3-225ENST00000514528 CEP170BQ9Y4F5 1589 aaPredicted RBP27.52■■■□□ 2
MATR3-225ENST00000514528 MTUS2Q5JR59 1369 aa27.51■■□□□ 1.99
MATR3-225ENST00000514528 SOCS7O14512 581 aa27.5■■□□□ 1.99
MATR3-225ENST00000514528 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
MATR3-225ENST00000514528 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
MATR3-225ENST00000514528 ZNF335Q9H4Z2 1342 aaPredicted RBP27.49■■□□□ 1.99
MATR3-225ENST00000514528 ZNF644Q9H582 1327 aaPredicted RBP27.49■■□□□ 1.99
MATR3-225ENST00000514528 GGT6Q6P531 493 aa27.48■■□□□ 1.99
MATR3-225ENST00000514528 SPATA31D1Q6ZQQ2 1576 aa27.47■■□□□ 1.99
MATR3-225ENST00000514528 CEP162Q5TB80 1403 aa27.46■■□□□ 1.99
MATR3-225ENST00000514528 ADGBQ8N7X0 1667 aa27.46■■□□□ 1.99
MATR3-225ENST00000514528 EHBP1L1Q8N3D4 1523 aa27.44■■□□□ 1.98
MATR3-225ENST00000514528 DHX29Q7Z478 1369 aaKnown RBP27.44■■□□□ 1.98
MATR3-225ENST00000514528 A2ML1A8K2U0 1454 aa27.42■■□□□ 1.98
MATR3-225ENST00000514528 FAM135AQ9P2D6 1515 aa27.37■■□□□ 1.97
MATR3-225ENST00000514528 DNMT1P26358 1616 aaKnown RBP27.37■■□□□ 1.97
MATR3-225ENST00000514528 UBAP1LF5GYI3 381 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms