RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 ILDR1Q86SU0 546 aaPredicted RBP12.75□□□□□ -0.37
SRPK1-213ENST00000513367 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
SRPK1-213ENST00000513367 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
SRPK1-213ENST00000513367 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
SRPK1-213ENST00000513367 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
SRPK1-213ENST00000513367 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
SRPK1-213ENST00000513367 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
SRPK1-213ENST00000513367 GSE1Q14687 1217 aa12.68□□□□□ -0.38
SRPK1-213ENST00000513367 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
SRPK1-213ENST00000513367 WDR62O43379 1518 aa12.67□□□□□ -0.38
SRPK1-213ENST00000513367 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
SRPK1-213ENST00000513367 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
SRPK1-213ENST00000513367 ERBB3P21860 1342 aa12.64□□□□□ -0.39
SRPK1-213ENST00000513367 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
SRPK1-213ENST00000513367 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
SRPK1-213ENST00000513367 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
SRPK1-213ENST00000513367 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
SRPK1-213ENST00000513367 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
SRPK1-213ENST00000513367 ARHGEF11O15085 1522 aa12.61□□□□□ -0.39
SRPK1-213ENST00000513367 G3V3G9 751 aa12.59□□□□□ -0.39
SRPK1-213ENST00000513367 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
SRPK1-213ENST00000513367 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
SRPK1-213ENST00000513367 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
SRPK1-213ENST00000513367 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
SRPK1-213ENST00000513367 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
SRPK1-213ENST00000513367 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-213ENST00000513367 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
SRPK1-213ENST00000513367 CEP164Q9UPV0 1460 aa12.51□□□□□ -0.41
SRPK1-213ENST00000513367 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
SRPK1-213ENST00000513367 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
SRPK1-213ENST00000513367 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
SRPK1-213ENST00000513367 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
SRPK1-213ENST00000513367 ARAP1Q96P48 1450 aa12.44□□□□□ -0.42
SRPK1-213ENST00000513367 GPR153Q6NV75 609 aa12.43□□□□□ -0.42
SRPK1-213ENST00000513367 EFCAB3Q8N7B9 438 aa12.42□□□□□ -0.42
SRPK1-213ENST00000513367 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
SRPK1-213ENST00000513367 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
SRPK1-213ENST00000513367 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
SRPK1-213ENST00000513367 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
SRPK1-213ENST00000513367 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
SRPK1-213ENST00000513367 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
SRPK1-213ENST00000513367 ANKRD13DQ6ZTN6 518 aa12.36□□□□□ -0.43
SRPK1-213ENST00000513367 PTGER2P43116 358 aa12.33□□□□□ -0.44
SRPK1-213ENST00000513367 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
SRPK1-213ENST00000513367 CHD1O14646 1710 aa12.32□□□□□ -0.44
SRPK1-213ENST00000513367 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
SRPK1-213ENST00000513367 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
SRPK1-213ENST00000513367 KHSRPQ92945 711 aaKnown RBP eCLIP12.31□□□□□ -0.441e-7■■■□□ 15.1
SRPK1-213ENST00000513367 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
SRPK1-213ENST00000513367 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
SRPK1-213ENST00000513367 CFTRP13569 1480 aa12.27□□□□□ -0.44
SRPK1-213ENST00000513367 IFT140Q96RY7 1462 aa12.27□□□□□ -0.44
SRPK1-213ENST00000513367 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
SRPK1-213ENST00000513367 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
SRPK1-213ENST00000513367 WIZO95785 1651 aa12.25□□□□□ -0.45
SRPK1-213ENST00000513367 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
SRPK1-213ENST00000513367 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
SRPK1-213ENST00000513367 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
SRPK1-213ENST00000513367 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.463e-8■■□□□ 14
SRPK1-213ENST00000513367 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
SRPK1-213ENST00000513367 SOX12O15370 315 aa12.16□□□□□ -0.46
SRPK1-213ENST00000513367 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
SRPK1-213ENST00000513367 TOPBP1Q92547 1522 aa12.13□□□□□ -0.47
SRPK1-213ENST00000513367 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
SRPK1-213ENST00000513367 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
SRPK1-213ENST00000513367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
SRPK1-213ENST00000513367 NUDT7P0C024 238 aa12.1□□□□□ -0.47
SRPK1-213ENST00000513367 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
SRPK1-213ENST00000513367 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
SRPK1-213ENST00000513367 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
SRPK1-213ENST00000513367 PBX2P40425 430 aa12.08□□□□□ -0.48
SRPK1-213ENST00000513367 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
SRPK1-213ENST00000513367 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
SRPK1-213ENST00000513367 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
SRPK1-213ENST00000513367 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
SRPK1-213ENST00000513367 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
SRPK1-213ENST00000513367 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
SRPK1-213ENST00000513367 CHMP7Q8WUX9 453 aaPredicted RBP12.03□□□□□ -0.48
SRPK1-213ENST00000513367 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
SRPK1-213ENST00000513367 KIF3CO14782 793 aa12.02□□□□□ -0.49
SRPK1-213ENST00000513367 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
SRPK1-213ENST00000513367 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
SRPK1-213ENST00000513367 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
SRPK1-213ENST00000513367 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
SRPK1-213ENST00000513367 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
SRPK1-213ENST00000513367 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
SRPK1-213ENST00000513367 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
SRPK1-213ENST00000513367 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
SRPK1-213ENST00000513367 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
SRPK1-213ENST00000513367 PCDHGA4Q9Y5G9 962 aa11.98□□□□□ -0.49
SRPK1-213ENST00000513367 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
SRPK1-213ENST00000513367 NLRP6P59044 892 aa11.97□□□□□ -0.49
SRPK1-213ENST00000513367 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.49
SRPK1-213ENST00000513367 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
SRPK1-213ENST00000513367 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
SRPK1-213ENST00000513367 MAGI1Q96QZ7 1491 aaPredicted RBP11.91□□□□□ -0.5
SRPK1-213ENST00000513367 SLC34A2O95436 690 aa11.91□□□□□ -0.5
SRPK1-213ENST00000513367 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
SRPK1-213ENST00000513367 SOGA1O94964 1423 aa11.91□□□□□ -0.5
SRPK1-213ENST00000513367 HRO43593 1189 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms