RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
DHFR-207ENST00000513314 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
DHFR-207ENST00000513314 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
DHFR-207ENST00000513314 HS3ST6Q96QI5 342 aa12.9□□□□□ -0.34
DHFR-207ENST00000513314 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
DHFR-207ENST00000513314 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
DHFR-207ENST00000513314 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
DHFR-207ENST00000513314 PPP1R37O75864 691 aa12.87□□□□□ -0.35
DHFR-207ENST00000513314 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
DHFR-207ENST00000513314 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
DHFR-207ENST00000513314 MMRN1Q13201 1228 aa12.82□□□□□ -0.36
DHFR-207ENST00000513314 KRTAP3-3Q9BYR6 98 aa12.82□□□□□ -0.36
DHFR-207ENST00000513314 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
DHFR-207ENST00000513314 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
DHFR-207ENST00000513314 RYDENQ9NUL5 291 aaKnown RBP12.82□□□□□ -0.36
DHFR-207ENST00000513314 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
DHFR-207ENST00000513314 KIF3CO14782 793 aa12.81□□□□□ -0.36
DHFR-207ENST00000513314 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
DHFR-207ENST00000513314 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
DHFR-207ENST00000513314 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
DHFR-207ENST00000513314 ERBB3P21860 1342 aa12.76□□□□□ -0.37
DHFR-207ENST00000513314 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
DHFR-207ENST00000513314 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
DHFR-207ENST00000513314 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
DHFR-207ENST00000513314 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
DHFR-207ENST00000513314 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
DHFR-207ENST00000513314 SLC34A2O95436 690 aa12.66□□□□□ -0.38
DHFR-207ENST00000513314 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
DHFR-207ENST00000513314 FOXK1P85037 733 aa12.63□□□□□ -0.39
DHFR-207ENST00000513314 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
DHFR-207ENST00000513314 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
DHFR-207ENST00000513314 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
DHFR-207ENST00000513314 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
DHFR-207ENST00000513314 DSG2Q14126 1118 aa12.58□□□□□ -0.4
DHFR-207ENST00000513314 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
DHFR-207ENST00000513314 NUDT7P0C024 238 aa12.56□□□□□ -0.4
DHFR-207ENST00000513314 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
DHFR-207ENST00000513314 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
DHFR-207ENST00000513314 PDE4AP27815 886 aa12.54□□□□□ -0.4
DHFR-207ENST00000513314 BBXQ8WY36 941 aaPredicted RBP12.53□□□□□ -0.4
DHFR-207ENST00000513314 TBC1D12O60347 775 aa12.5□□□□□ -0.41
DHFR-207ENST00000513314 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
DHFR-207ENST00000513314 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
DHFR-207ENST00000513314 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
DHFR-207ENST00000513314 KDM4FA0A1W2PPD8 638 aa12.45□□□□□ -0.42
DHFR-207ENST00000513314 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
DHFR-207ENST00000513314 PSDA5PKW4 1024 aaPredicted RBP12.44□□□□□ -0.42
DHFR-207ENST00000513314 PTGER2P43116 358 aa12.44□□□□□ -0.42
DHFR-207ENST00000513314 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
DHFR-207ENST00000513314 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
DHFR-207ENST00000513314 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
DHFR-207ENST00000513314 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
DHFR-207ENST00000513314 PBX2P40425 430 aa12.42□□□□□ -0.42
DHFR-207ENST00000513314 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
DHFR-207ENST00000513314 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
DHFR-207ENST00000513314 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
DHFR-207ENST00000513314 MFSD10Q14728 455 aa12.4□□□□□ -0.42
DHFR-207ENST00000513314 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
DHFR-207ENST00000513314 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
DHFR-207ENST00000513314 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
DHFR-207ENST00000513314 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
DHFR-207ENST00000513314 PPP4R3BQ5MIZ7 849 aa12.33□□□□□ -0.44
DHFR-207ENST00000513314 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
DHFR-207ENST00000513314 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
DHFR-207ENST00000513314 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
DHFR-207ENST00000513314 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
DHFR-207ENST00000513314 EVI5O60447 810 aa12.28□□□□□ -0.44
DHFR-207ENST00000513314 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
DHFR-207ENST00000513314 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
DHFR-207ENST00000513314 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
DHFR-207ENST00000513314 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
DHFR-207ENST00000513314 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
DHFR-207ENST00000513314 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
DHFR-207ENST00000513314 PSEN2P49810 448 aa12.22□□□□□ -0.45
DHFR-207ENST00000513314 FOSBP53539 338 aa12.22□□□□□ -0.45
DHFR-207ENST00000513314 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
DHFR-207ENST00000513314 TK2O00142 265 aa12.21□□□□□ -0.45
DHFR-207ENST00000513314 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
DHFR-207ENST00000513314 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
DHFR-207ENST00000513314 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
DHFR-207ENST00000513314 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
DHFR-207ENST00000513314 HRO43593 1189 aa12.16□□□□□ -0.46
DHFR-207ENST00000513314 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
DHFR-207ENST00000513314 DPYSL4O14531 572 aa12.14□□□□□ -0.47
DHFR-207ENST00000513314 PTPREP23469 700 aa12.13□□□□□ -0.47
DHFR-207ENST00000513314 WDR70Q9NW82 654 aa12.12□□□□□ -0.47
DHFR-207ENST00000513314 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
DHFR-207ENST00000513314 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
DHFR-207ENST00000513314 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
DHFR-207ENST00000513314 PHF14O94880 888 aa12.09□□□□□ -0.47
DHFR-207ENST00000513314 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
DHFR-207ENST00000513314 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
DHFR-207ENST00000513314 E2F4Q16254 413 aa12.08□□□□□ -0.48
DHFR-207ENST00000513314 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
DHFR-207ENST00000513314 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
DHFR-207ENST00000513314 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
DHFR-207ENST00000513314 EPAS1Q99814 870 aa12.05□□□□□ -0.48
DHFR-207ENST00000513314 ZBED2Q9BTP6 218 aa12.04□□□□□ -0.48
DHFR-207ENST00000513314 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
DHFR-207ENST00000513314 PDIA6Q15084 440 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms