RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 PKD2Q13563 968 aa8.29□□□□□ -1.08
SUB1-212ENST00000513013 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
SUB1-212ENST00000513013 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
SUB1-212ENST00000513013 ERBB3P21860 1342 aa8.27□□□□□ -1.09
SUB1-212ENST00000513013 RGL2O15211 777 aa8.25□□□□□ -1.09
SUB1-212ENST00000513013 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
SUB1-212ENST00000513013 MFRPQ9BY79 579 aa8.25□□□□□ -1.09
SUB1-212ENST00000513013 TMEM92Q6UXU6 159 aa8.24□□□□□ -1.09
SUB1-212ENST00000513013 MMRN1Q13201 1228 aa8.22□□□□□ -1.09
SUB1-212ENST00000513013 POTEB3A0JP26 581 aa8.19□□□□□ -1.1
SUB1-212ENST00000513013 POTEBQ6S5H4 581 aa8.19□□□□□ -1.1
SUB1-212ENST00000513013 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
SUB1-212ENST00000513013 VARS2Q5ST30 1063 aaKnown RBP8.18□□□□□ -1.1
SUB1-212ENST00000513013 GPR153Q6NV75 609 aa8.18□□□□□ -1.1
SUB1-212ENST00000513013 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
SUB1-212ENST00000513013 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
SUB1-212ENST00000513013 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
SUB1-212ENST00000513013 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
SUB1-212ENST00000513013 C2orf72A6NCS6 295 aa8.15□□□□□ -1.1
SUB1-212ENST00000513013 KIF3CO14782 793 aa8.15□□□□□ -1.1
SUB1-212ENST00000513013 ZNF687Q8N1G0 1237 aa8.15□□□□□ -1.1
SUB1-212ENST00000513013 ARSIQ5FYB1 569 aa8.14□□□□□ -1.11
SUB1-212ENST00000513013 SLC34A2O95436 690 aa8.13□□□□□ -1.11
SUB1-212ENST00000513013 ZNF316A6NFI3 1004 aaPredicted RBP8.11□□□□□ -1.11
SUB1-212ENST00000513013 PTGER2P43116 358 aa8.11□□□□□ -1.11
SUB1-212ENST00000513013 CHGAP10645 457 aaKnown RBP8.1□□□□□ -1.11
SUB1-212ENST00000513013 PSDA5PKW4 1024 aaPredicted RBP8.08□□□□□ -1.12
SUB1-212ENST00000513013 PPP1R37O75864 691 aa8.07□□□□□ -1.12
SUB1-212ENST00000513013 PBX2P40425 430 aa8.07□□□□□ -1.12
SUB1-212ENST00000513013 DNAJC5Q9H3Z4 198 aa8.07□□□□□ -1.12
SUB1-212ENST00000513013 PCDHGA4Q9Y5G9 962 aa8.07□□□□□ -1.12
SUB1-212ENST00000513013 TBC1D12O60347 775 aa8.05□□□□□ -1.12
SUB1-212ENST00000513013 NUDT7P0C024 238 aa8.05□□□□□ -1.12
SUB1-212ENST00000513013 FOXK1P85037 733 aa8.04□□□□□ -1.12
SUB1-212ENST00000513013 KHSRPQ92945 711 aaKnown RBP eCLIP8.04□□□□□ -1.125e-7■■□□□ 12.3
SUB1-212ENST00000513013 RNF166Q96A37 237 aaPredicted RBP8.04□□□□□ -1.12
SUB1-212ENST00000513013 GPHNQ9NQX3 736 aaPredicted RBP8.04□□□□□ -1.12
SUB1-212ENST00000513013 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
SUB1-212ENST00000513013 ANKRD13DQ6ZTN6 518 aa8.02□□□□□ -1.13
SUB1-212ENST00000513013 PTCD2Q8WV60 388 aaKnown RBP8.02□□□□□ -1.13
SUB1-212ENST00000513013 LSM11P83369 360 aaKnown RBP eCLIP8.01□□□□□ -1.133e-6■■■□□ 18.3
SUB1-212ENST00000513013 PLPP6Q8IY26 295 aa8.01□□□□□ -1.13
SUB1-212ENST00000513013 LHX6Q9UPM6 363 aa8.01□□□□□ -1.13
SUB1-212ENST00000513013 PLCB2Q00722 1185 aa7.97□□□□□ -1.13
SUB1-212ENST00000513013 ARHGAP33O14559 1287 aa7.96□□□□□ -1.14
SUB1-212ENST00000513013 DSG2Q14126 1118 aa7.96□□□□□ -1.14
SUB1-212ENST00000513013 KCNH8Q96L42 1107 aa7.96□□□□□ -1.14
SUB1-212ENST00000513013 PDE4AP27815 886 aa7.95□□□□□ -1.14
SUB1-212ENST00000513013 NKX1-1Q15270 411 aaPredicted RBP7.95□□□□□ -1.14
SUB1-212ENST00000513013 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
SUB1-212ENST00000513013 DCAF8L2P0C7V8 631 aa7.93□□□□□ -1.14
SUB1-212ENST00000513013 KDM4FA0A1W2PPD8 638 aa7.92□□□□□ -1.14
SUB1-212ENST00000513013 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
SUB1-212ENST00000513013 TK2O00142 265 aa7.91□□□□□ -1.14
SUB1-212ENST00000513013 PPP1R15BQ5SWA1 713 aa7.9□□□□□ -1.14
SUB1-212ENST00000513013 OXER1Q8TDS5 423 aa7.9□□□□□ -1.14
SUB1-212ENST00000513013 STAC3Q96MF2 364 aa7.9□□□□□ -1.14
SUB1-212ENST00000513013 AXIN2Q9Y2T1 843 aa7.9□□□□□ -1.14
SUB1-212ENST00000513013 ADGRD1Q6QNK2 874 aa7.89□□□□□ -1.15
SUB1-212ENST00000513013 GTPBP6O43824 516 aaPredicted RBP7.88□□□□□ -1.15
SUB1-212ENST00000513013 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
SUB1-212ENST00000513013 UPF1Q92900 1129 aaKnown RBP eCLIP7.86□□□□□ -1.15
SUB1-212ENST00000513013 DDX27Q96GQ7 796 aaKnown RBP7.86□□□□□ -1.15
SUB1-212ENST00000513013 HCSTQ9UBK5 93 aa7.86□□□□□ -1.15
SUB1-212ENST00000513013 LARP6Q9BRS8 491 aaKnown RBP7.85□□□□□ -1.15
SUB1-212ENST00000513013 NCKAP5LQ9HCH0 1330 aa7.83□□□□□ -1.16
SUB1-212ENST00000513013 ZNF454Q8N9F8 522 aa7.83□□□□□ -1.16
SUB1-212ENST00000513013 KCNK17Q96T54 332 aa7.83□□□□□ -1.16
SUB1-212ENST00000513013 PSEN2P49810 448 aa7.82□□□□□ -1.16
SUB1-212ENST00000513013 HAP1P54257 671 aaPredicted RBP7.82□□□□□ -1.16
SUB1-212ENST00000513013 MAP3K9P80192 1104 aa7.82□□□□□ -1.16
SUB1-212ENST00000513013 BCL2L12Q9HB09 334 aa7.81□□□□□ -1.16
SUB1-212ENST00000513013 ANO8Q9HCE9 1232 aaPredicted RBP7.81□□□□□ -1.16
SUB1-212ENST00000513013 PTPREP23469 700 aa7.8□□□□□ -1.16
SUB1-212ENST00000513013 MFSD10Q14728 455 aa7.8□□□□□ -1.16
SUB1-212ENST00000513013 DMRTA1Q5VZB9 504 aa7.8□□□□□ -1.16
SUB1-212ENST00000513013 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
SUB1-212ENST00000513013 SLC4A5Q9BY07 1137 aa7.8□□□□□ -1.16
SUB1-212ENST00000513013 HRO43593 1189 aa7.79□□□□□ -1.16
SUB1-212ENST00000513013 EVI5O60447 810 aa7.79□□□□□ -1.16
SUB1-212ENST00000513013 FOSBP53539 338 aa7.79□□□□□ -1.16
SUB1-212ENST00000513013 VSIG10Q8N0Z9 540 aa7.78□□□□□ -1.16
SUB1-212ENST00000513013 BCANQ96GW7 911 aa7.78□□□□□ -1.16
SUB1-212ENST00000513013 ZDHHC16Q969W1 377 aa7.77□□□□□ -1.17
SUB1-212ENST00000513013 VPS9D1Q9Y2B5 631 aa7.77□□□□□ -1.17
SUB1-212ENST00000513013 BBXQ8WY36 941 aaPredicted RBP7.76□□□□□ -1.17
SUB1-212ENST00000513013 PLA2G2EQ9NZK7 142 aa7.75□□□□□ -1.17
SUB1-212ENST00000513013 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
SUB1-212ENST00000513013 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
SUB1-212ENST00000513013 KCTD12Q96CX2 325 aaKnown RBP7.74□□□□□ -1.17
SUB1-212ENST00000513013 NBPF3Q9H094 633 aa7.73□□□□□ -1.17
SUB1-212ENST00000513013 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.72□□□□□ -1.17
SUB1-212ENST00000513013 MRPL50Q8N5N7 158 aaKnown RBP7.71□□□□□ -1.18
SUB1-212ENST00000513013 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.18
SUB1-212ENST00000513013 PHF14O94880 888 aa7.7□□□□□ -1.18
SUB1-212ENST00000513013 TYW1BQ6NUM6 668 aa7.7□□□□□ -1.18
SUB1-212ENST00000513013 ADAM33Q9BZ11 813 aa7.7□□□□□ -1.18
SUB1-212ENST00000513013 EMILIN3Q9NT22 766 aa7.7□□□□□ -1.18
SUB1-212ENST00000513013 PPP1R3GB7ZBB8 358 aa7.69□□□□□ -1.18
SUB1-212ENST00000513013 EPAS1Q99814 870 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms