RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
PFDN1-205ENST00000512925 MLECQ14165 292 aa17.65■□□□□ 0.42
PFDN1-205ENST00000512925 ZFYVE16Q7Z3T8 1539 aa17.65■□□□□ 0.42
PFDN1-205ENST00000512925 EFCAB5A4FU69 1503 aa17.62■□□□□ 0.41
PFDN1-205ENST00000512925 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
PFDN1-205ENST00000512925 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
PFDN1-205ENST00000512925 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
PFDN1-205ENST00000512925 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
PFDN1-205ENST00000512925 SCAPERQ9BY12 1400 aa17.6■□□□□ 0.41
PFDN1-205ENST00000512925 PLCH2O75038 1416 aa17.59■□□□□ 0.41
PFDN1-205ENST00000512925 ILDR2Q71H61 639 aa17.59■□□□□ 0.41
PFDN1-205ENST00000512925 ARHGEF12Q9NZN5 1544 aa17.58■□□□□ 0.41
PFDN1-205ENST00000512925 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
PFDN1-205ENST00000512925 ATP10AO60312 1499 aa17.56■□□□□ 0.4
PFDN1-205ENST00000512925 FER1L4A9Z1Z3 1794 aa17.56■□□□□ 0.4
PFDN1-205ENST00000512925 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
PFDN1-205ENST00000512925 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
PFDN1-205ENST00000512925 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
PFDN1-205ENST00000512925 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
PFDN1-205ENST00000512925 SOCS7O14512 581 aa17.51■□□□□ 0.39
PFDN1-205ENST00000512925 EEA1Q15075 1411 aa17.51■□□□□ 0.39
PFDN1-205ENST00000512925 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
PFDN1-205ENST00000512925 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
PFDN1-205ENST00000512925 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
PFDN1-205ENST00000512925 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
PFDN1-205ENST00000512925 AFAP1Q8N556 730 aa17.48■□□□□ 0.39
PFDN1-205ENST00000512925 UHRF1BP1Q6BDS2 1440 aa17.45■□□□□ 0.38
PFDN1-205ENST00000512925 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
PFDN1-205ENST00000512925 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
PFDN1-205ENST00000512925 PTPRTO14522 1441 aa17.43■□□□□ 0.38
PFDN1-205ENST00000512925 KDM5CP41229 1560 aa17.43■□□□□ 0.38
PFDN1-205ENST00000512925 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
PFDN1-205ENST00000512925 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
PFDN1-205ENST00000512925 CDK11AQ9UQ88 783 aaPredicted RBP17.4■□□□□ 0.38
PFDN1-205ENST00000512925 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
PFDN1-205ENST00000512925 DIP2CQ9Y2E4 1556 aa17.4■□□□□ 0.38
PFDN1-205ENST00000512925 KIF14Q15058 1648 aa17.39■□□□□ 0.38
PFDN1-205ENST00000512925 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
PFDN1-205ENST00000512925 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
PFDN1-205ENST00000512925 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
PFDN1-205ENST00000512925 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
PFDN1-205ENST00000512925 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
PFDN1-205ENST00000512925 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
PFDN1-205ENST00000512925 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
PFDN1-205ENST00000512925 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
PFDN1-205ENST00000512925 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
PFDN1-205ENST00000512925 AGLP35573 1532 aa17.35■□□□□ 0.37
PFDN1-205ENST00000512925 C3P01024 1663 aa17.35■□□□□ 0.37
PFDN1-205ENST00000512925 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
PFDN1-205ENST00000512925 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
PFDN1-205ENST00000512925 NCOA1Q15788 1441 aa17.33■□□□□ 0.36
PFDN1-205ENST00000512925 IQSEC2Q5JU85 1478 aa17.32■□□□□ 0.36
PFDN1-205ENST00000512925 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
PFDN1-205ENST00000512925 CLIP1P30622 1438 aa17.3■□□□□ 0.36
PFDN1-205ENST00000512925 EHMT2Q96KQ7 1210 aa17.3■□□□□ 0.36
PFDN1-205ENST00000512925 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
PFDN1-205ENST00000512925 CDC42BPBQ9Y5S2 1711 aa17.29■□□□□ 0.36
PFDN1-205ENST00000512925 ABCC1P33527 1531 aa17.27■□□□□ 0.36
PFDN1-205ENST00000512925 CNTLNQ9NXG0 1405 aa17.27■□□□□ 0.35
PFDN1-205ENST00000512925 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
PFDN1-205ENST00000512925 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
PFDN1-205ENST00000512925 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
PFDN1-205ENST00000512925 NPATQ14207 1427 aa17.24■□□□□ 0.35
PFDN1-205ENST00000512925 ZMYM3Q14202 1370 aa17.24■□□□□ 0.35
PFDN1-205ENST00000512925 CAMSAP1Q5T5Y3 1602 aa17.24■□□□□ 0.35
PFDN1-205ENST00000512925 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
PFDN1-205ENST00000512925 PREX2Q70Z35 1606 aa17.23■□□□□ 0.35
PFDN1-205ENST00000512925 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
PFDN1-205ENST00000512925 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
PFDN1-205ENST00000512925 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
PFDN1-205ENST00000512925 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
PFDN1-205ENST00000512925 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
PFDN1-205ENST00000512925 PKD2Q13563 968 aa17.17■□□□□ 0.34
PFDN1-205ENST00000512925 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
PFDN1-205ENST00000512925 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
PFDN1-205ENST00000512925 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
PFDN1-205ENST00000512925 TCOF1Q13428 1488 aaKnown RBP17.16■□□□□ 0.34
PFDN1-205ENST00000512925 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
PFDN1-205ENST00000512925 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
PFDN1-205ENST00000512925 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
PFDN1-205ENST00000512925 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
PFDN1-205ENST00000512925 GPATCH8Q9UKJ3 1502 aaKnown RBP17.13■□□□□ 0.33
PFDN1-205ENST00000512925 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
PFDN1-205ENST00000512925 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
PFDN1-205ENST00000512925 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
PFDN1-205ENST00000512925 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
PFDN1-205ENST00000512925 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
PFDN1-205ENST00000512925 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
PFDN1-205ENST00000512925 GGT6Q6P531 493 aa17.1■□□□□ 0.33
PFDN1-205ENST00000512925 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
PFDN1-205ENST00000512925 A2MP01023 1474 aa17.1■□□□□ 0.33
PFDN1-205ENST00000512925 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
PFDN1-205ENST00000512925 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
PFDN1-205ENST00000512925 HSPA1LP34931 641 aa17.07■□□□□ 0.32
PFDN1-205ENST00000512925 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
PFDN1-205ENST00000512925 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
PFDN1-205ENST00000512925 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
PFDN1-205ENST00000512925 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
PFDN1-205ENST00000512925 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
PFDN1-205ENST00000512925 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms