RNA–Protein interactions for RNA: ENST00000512797.5

RPS3A-211, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-211ENST00000512797 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
RPS3A-211ENST00000512797 KIF3CO14782 793 aa13.03□□□□□ -0.32
RPS3A-211ENST00000512797 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
RPS3A-211ENST00000512797 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
RPS3A-211ENST00000512797 EMP3P54852 163 aa13.01□□□□□ -0.33
RPS3A-211ENST00000512797 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
RPS3A-211ENST00000512797 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
RPS3A-211ENST00000512797 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
RPS3A-211ENST00000512797 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
RPS3A-211ENST00000512797 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
RPS3A-211ENST00000512797 FAM205CA6NFA0 338 aa12.96□□□□□ -0.33
RPS3A-211ENST00000512797 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
RPS3A-211ENST00000512797 TMC2Q8TDI7 906 aa12.96□□□□□ -0.33
RPS3A-211ENST00000512797 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
RPS3A-211ENST00000512797 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
RPS3A-211ENST00000512797 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
RPS3A-211ENST00000512797 RYDENQ9NUL5 291 aaKnown RBP12.93□□□□□ -0.34
RPS3A-211ENST00000512797 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
RPS3A-211ENST00000512797 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
RPS3A-211ENST00000512797 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
RPS3A-211ENST00000512797 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.356e-9■□□□□ 10
RPS3A-211ENST00000512797 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
RPS3A-211ENST00000512797 ERBB3P21860 1342 aa12.87□□□□□ -0.35
RPS3A-211ENST00000512797 FOXK1P85037 733 aa12.84□□□□□ -0.35
RPS3A-211ENST00000512797 SLC34A2O95436 690 aa12.83□□□□□ -0.36
RPS3A-211ENST00000512797 DSG2Q14126 1118 aa12.83□□□□□ -0.36
RPS3A-211ENST00000512797 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
RPS3A-211ENST00000512797 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
RPS3A-211ENST00000512797 PCDHGA4Q9Y5G9 962 aa12.81□□□□□ -0.36
RPS3A-211ENST00000512797 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
RPS3A-211ENST00000512797 KRTAP3-3Q9BYR6 98 aa12.79□□□□□ -0.36
RPS3A-211ENST00000512797 KRTAP3-2Q9BYR7 98 aa12.79□□□□□ -0.36
RPS3A-211ENST00000512797 NUDT7P0C024 238 aa12.78□□□□□ -0.36
RPS3A-211ENST00000512797 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
RPS3A-211ENST00000512797 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
RPS3A-211ENST00000512797 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
RPS3A-211ENST00000512797 PDE4AP27815 886 aa12.74□□□□□ -0.37
RPS3A-211ENST00000512797 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
RPS3A-211ENST00000512797 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
RPS3A-211ENST00000512797 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
RPS3A-211ENST00000512797 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
RPS3A-211ENST00000512797 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
RPS3A-211ENST00000512797 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
RPS3A-211ENST00000512797 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
RPS3A-211ENST00000512797 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
RPS3A-211ENST00000512797 SPRYD3Q8NCJ5 442 aa12.65□□□□□ -0.38
RPS3A-211ENST00000512797 TBC1D12O60347 775 aa12.64□□□□□ -0.39
RPS3A-211ENST00000512797 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
RPS3A-211ENST00000512797 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPS3A-211ENST00000512797 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
RPS3A-211ENST00000512797 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
RPS3A-211ENST00000512797 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
RPS3A-211ENST00000512797 MFSD10Q14728 455 aa12.61□□□□□ -0.39
RPS3A-211ENST00000512797 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
RPS3A-211ENST00000512797 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
RPS3A-211ENST00000512797 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
RPS3A-211ENST00000512797 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
RPS3A-211ENST00000512797 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
RPS3A-211ENST00000512797 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
RPS3A-211ENST00000512797 PSDA5PKW4 1024 aaPredicted RBP12.51□□□□□ -0.41
RPS3A-211ENST00000512797 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
RPS3A-211ENST00000512797 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.41
RPS3A-211ENST00000512797 EVI5O60447 810 aa12.49□□□□□ -0.41
RPS3A-211ENST00000512797 PBX2P40425 430 aa12.49□□□□□ -0.41
RPS3A-211ENST00000512797 ANO8Q9HCE9 1232 aaPredicted RBP12.49□□□□□ -0.41
RPS3A-211ENST00000512797 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
RPS3A-211ENST00000512797 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
RPS3A-211ENST00000512797 PSEN2P49810 448 aa12.45□□□□□ -0.42
RPS3A-211ENST00000512797 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
RPS3A-211ENST00000512797 ZNF454Q8N9F8 522 aa12.44□□□□□ -0.42
RPS3A-211ENST00000512797 FOSBP53539 338 aa12.42□□□□□ -0.42
RPS3A-211ENST00000512797 DMRTA1Q5VZB9 504 aa12.42□□□□□ -0.42
RPS3A-211ENST00000512797 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
RPS3A-211ENST00000512797 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
RPS3A-211ENST00000512797 DPYSL4O14531 572 aa12.37□□□□□ -0.43
RPS3A-211ENST00000512797 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
RPS3A-211ENST00000512797 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
RPS3A-211ENST00000512797 ADGRD1Q6QNK2 874 aa12.35□□□□□ -0.43
RPS3A-211ENST00000512797 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
RPS3A-211ENST00000512797 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
RPS3A-211ENST00000512797 PTGER2P43116 358 aa12.34□□□□□ -0.43
RPS3A-211ENST00000512797 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
RPS3A-211ENST00000512797 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
RPS3A-211ENST00000512797 PCDHGA10Q9Y5H3 936 aa12.33□□□□□ -0.44
RPS3A-211ENST00000512797 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
RPS3A-211ENST00000512797 TK2O00142 265 aa12.31□□□□□ -0.44
RPS3A-211ENST00000512797 E2F4Q16254 413 aa12.31□□□□□ -0.44
RPS3A-211ENST00000512797 HRO43593 1189 aa12.29□□□□□ -0.44
RPS3A-211ENST00000512797 PTPREP23469 700 aa12.28□□□□□ -0.44
RPS3A-211ENST00000512797 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
RPS3A-211ENST00000512797 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.45
RPS3A-211ENST00000512797 PHF14O94880 888 aa12.26□□□□□ -0.45
RPS3A-211ENST00000512797 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
RPS3A-211ENST00000512797 DDX12PQ92771 950 aa12.24□□□□□ -0.45
RPS3A-211ENST00000512797 PDIA6Q15084 440 aa12.22□□□□□ -0.45
RPS3A-211ENST00000512797 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
RPS3A-211ENST00000512797 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
RPS3A-211ENST00000512797 EPAS1Q99814 870 aa12.21□□□□□ -0.45
RPS3A-211ENST00000512797 SLC4A5Q9BY07 1137 aa12.21□□□□□ -0.45
RPS3A-211ENST00000512797 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms