RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 CUX2O14529 1486 aa16.13■□□□□ 0.17
SNF8-211ENST00000512243 CUX1P39880 1505 aa16.13■□□□□ 0.17
SNF8-211ENST00000512243 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
SNF8-211ENST00000512243 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SNF8-211ENST00000512243 OCEL1Q9H607 264 aa16.11■□□□□ 0.17
SNF8-211ENST00000512243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.1■□□□□ 0.17
SNF8-211ENST00000512243 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
SNF8-211ENST00000512243 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
SNF8-211ENST00000512243 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
SNF8-211ENST00000512243 TOP2BQ02880 1626 aa16.08■□□□□ 0.17
SNF8-211ENST00000512243 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
SNF8-211ENST00000512243 SCUBE2Q9NQ36 999 aa16.07■□□□□ 0.16
SNF8-211ENST00000512243 RGL2O15211 777 aa16.06■□□□□ 0.16
SNF8-211ENST00000512243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNF8-211ENST00000512243 PDCD7Q8N8D1 485 aaKnown RBP16.05■□□□□ 0.16
SNF8-211ENST00000512243 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
SNF8-211ENST00000512243 POLA1P09884 1462 aaPredicted RBP16.03■□□□□ 0.16
SNF8-211ENST00000512243 EFCAB3Q8N7B9 438 aa16.02■□□□□ 0.16
SNF8-211ENST00000512243 IFT140Q96RY7 1462 aa15.98■□□□□ 0.15
SNF8-211ENST00000512243 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
SNF8-211ENST00000512243 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
SNF8-211ENST00000512243 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
SNF8-211ENST00000512243 TAOK2Q9UL54 1235 aa15.95■□□□□ 0.14
SNF8-211ENST00000512243 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
SNF8-211ENST00000512243 SOGA1O94964 1423 aa15.94■□□□□ 0.14
SNF8-211ENST00000512243 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
SNF8-211ENST00000512243 STK24Q9Y6E0 443 aa15.93■□□□□ 0.14
SNF8-211ENST00000512243 STK25O00506 426 aa15.92■□□□□ 0.14
SNF8-211ENST00000512243 ILDR1Q86SU0 546 aaPredicted RBP15.92■□□□□ 0.14
SNF8-211ENST00000512243 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
SNF8-211ENST00000512243 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
SNF8-211ENST00000512243 SLAIN1Q8ND83 568 aa15.87■□□□□ 0.13
SNF8-211ENST00000512243 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
SNF8-211ENST00000512243 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
SNF8-211ENST00000512243 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
SNF8-211ENST00000512243 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
SNF8-211ENST00000512243 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
SNF8-211ENST00000512243 SOX12O15370 315 aa15.83■□□□□ 0.12
SNF8-211ENST00000512243 C3orf67Q6ZVT6 689 aa15.82■□□□□ 0.12
SNF8-211ENST00000512243 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.82■□□□□ 0.12
SNF8-211ENST00000512243 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
SNF8-211ENST00000512243 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.123e-6■■■□□ 17.8
SNF8-211ENST00000512243 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
SNF8-211ENST00000512243 MS4A4AQ96JQ5 239 aa15.78■□□□□ 0.12
SNF8-211ENST00000512243 BOLA1Q9Y3E2 137 aa15.78■□□□□ 0.12
SNF8-211ENST00000512243 G3V3G9 751 aa15.77■□□□□ 0.12
SNF8-211ENST00000512243 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
SNF8-211ENST00000512243 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
SNF8-211ENST00000512243 FAM163AQ96GL9 167 aaPredicted RBP15.73■□□□□ 0.11
SNF8-211ENST00000512243 MFRPQ9BY79 579 aa15.73■□□□□ 0.11
SNF8-211ENST00000512243 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
SNF8-211ENST00000512243 NLRP6P59044 892 aa15.72■□□□□ 0.11
SNF8-211ENST00000512243 FBXO22Q8NEZ5 403 aa15.71■□□□□ 0.11
SNF8-211ENST00000512243 SNAPC4Q5SXM2 1469 aa15.7■□□□□ 0.1
SNF8-211ENST00000512243 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
SNF8-211ENST00000512243 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
SNF8-211ENST00000512243 CUL7Q14999 1698 aa15.68■□□□□ 0.1
SNF8-211ENST00000512243 ADAMTS12P58397 1594 aa15.68■□□□□ 0.1
SNF8-211ENST00000512243 MICALL2Q8IY33 904 aa15.67■□□□□ 0.1
SNF8-211ENST00000512243 HS6ST3Q8IZP7 471 aa15.67■□□□□ 0.1
SNF8-211ENST00000512243 EEA1Q15075 1411 aa15.67■□□□□ 0.1
SNF8-211ENST00000512243 CHD1O14646 1710 aa15.66■□□□□ 0.1
SNF8-211ENST00000512243 LCE2DQ5TA82 110 aaPredicted RBP15.66■□□□□ 0.1
SNF8-211ENST00000512243 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
SNF8-211ENST00000512243 TMEM121BQ9BXQ6 578 aaPredicted RBP15.65■□□□□ 0.1
SNF8-211ENST00000512243 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
SNF8-211ENST00000512243 IGF1RP08069 1367 aa15.61■□□□□ 0.09
SNF8-211ENST00000512243 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
SNF8-211ENST00000512243 POTEMA6NI47 508 aa15.58■□□□□ 0.08
SNF8-211ENST00000512243 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
SNF8-211ENST00000512243 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
SNF8-211ENST00000512243 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
SNF8-211ENST00000512243 ST18O60284 1047 aa15.54■□□□□ 0.08
SNF8-211ENST00000512243 TMEM92Q6UXU6 159 aa15.54■□□□□ 0.08
SNF8-211ENST00000512243 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
SNF8-211ENST00000512243 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
SNF8-211ENST00000512243 SNPHO15079 494 aa15.53■□□□□ 0.08
SNF8-211ENST00000512243 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.07
SNF8-211ENST00000512243 KIF21BO75037 1637 aa15.51■□□□□ 0.07
SNF8-211ENST00000512243 PPP1R37O75864 691 aa15.51■□□□□ 0.07
SNF8-211ENST00000512243 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
SNF8-211ENST00000512243 NKX1-1Q15270 411 aaPredicted RBP15.5■□□□□ 0.07
SNF8-211ENST00000512243 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
SNF8-211ENST00000512243 CEP170Q5SW79 1584 aa15.48■□□□□ 0.07
SNF8-211ENST00000512243 CTTNBP2Q8WZ74 1663 aa15.47■□□□□ 0.07
SNF8-211ENST00000512243 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
SNF8-211ENST00000512243 NUP160Q12769 1436 aa15.45■□□□□ 0.06
SNF8-211ENST00000512243 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
SNF8-211ENST00000512243 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
SNF8-211ENST00000512243 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
SNF8-211ENST00000512243 HOXB3P14651 431 aaPredicted RBP15.41■□□□□ 0.06
SNF8-211ENST00000512243 MARVELD3Q96A59 401 aa15.39■□□□□ 0.05
SNF8-211ENST00000512243 IQGAP2Q13576 1575 aa15.38■□□□□ 0.05
SNF8-211ENST00000512243 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
SNF8-211ENST00000512243 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
SNF8-211ENST00000512243 C2orf72A6NCS6 295 aa15.34■□□□□ 0.05
SNF8-211ENST00000512243 DOK7Q18PE1 504 aa15.33■□□□□ 0.04
SNF8-211ENST00000512243 ZNF710Q8N1W2 664 aa15.33■□□□□ 0.04
SNF8-211ENST00000512243 KIF3CO14782 793 aa15.3■□□□□ 0.04
SNF8-211ENST00000512243 RYDENQ9NUL5 291 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms