RNA–Protein interactions for RNA: ENST00000511996.5

AFF1-209, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-209ENST00000511996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.66■■□□□ 1.38
AFF1-209ENST00000511996 DMRT2Q9Y5R5 561 aa23.66■■□□□ 1.38
AFF1-209ENST00000511996 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
AFF1-209ENST00000511996 SPATA31D1Q6ZQQ2 1576 aa23.64■■□□□ 1.37
AFF1-209ENST00000511996 STRCQ7RTU9 1775 aa23.63■■□□□ 1.37
AFF1-209ENST00000511996 SETD1BQ9UPS6 1966 aaKnown RBP23.6■■□□□ 1.37
AFF1-209ENST00000511996 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
AFF1-209ENST00000511996 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
AFF1-209ENST00000511996 ATP10AO60312 1499 aa23.56■■□□□ 1.36
AFF1-209ENST00000511996 CEBPAP49715 358 aaPredicted RBP23.55■■□□□ 1.36
AFF1-209ENST00000511996 SCAPERQ9BY12 1400 aa23.55■■□□□ 1.36
AFF1-209ENST00000511996 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
AFF1-209ENST00000511996 UHRF1BP1Q6BDS2 1440 aa23.53■■□□□ 1.36
AFF1-209ENST00000511996 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
AFF1-209ENST00000511996 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
AFF1-209ENST00000511996 PLCH2O75038 1416 aa23.48■■□□□ 1.35
AFF1-209ENST00000511996 PTPRTO14522 1441 aa23.45■■□□□ 1.34
AFF1-209ENST00000511996 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
AFF1-209ENST00000511996 EFCAB2Q5VUJ9 269 aa23.43■■□□□ 1.34
AFF1-209ENST00000511996 CDK13Q14004 1512 aaKnown RBP23.43■■□□□ 1.34
AFF1-209ENST00000511996 C3P01024 1663 aa23.42■■□□□ 1.34
AFF1-209ENST00000511996 IQSEC2Q5JU85 1478 aa23.39■■□□□ 1.34
AFF1-209ENST00000511996 ZNF518AQ6AHZ1 1483 aa23.38■■□□□ 1.33
AFF1-209ENST00000511996 LTBP4Q8N2S1 1624 aa23.38■■□□□ 1.33
AFF1-209ENST00000511996 ESF1Q9H501 851 aaKnown RBP23.38■■□□□ 1.33
AFF1-209ENST00000511996 KDM5CP41229 1560 aa23.34■■□□□ 1.33
AFF1-209ENST00000511996 DIP2CQ9Y2E4 1556 aa23.33■■□□□ 1.33
AFF1-209ENST00000511996 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.33
AFF1-209ENST00000511996 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
AFF1-209ENST00000511996 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
AFF1-209ENST00000511996 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
AFF1-209ENST00000511996 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
AFF1-209ENST00000511996 KIF14Q15058 1648 aa23.3■■□□□ 1.32
AFF1-209ENST00000511996 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
AFF1-209ENST00000511996 EEA1Q15075 1411 aa23.28■■□□□ 1.32
AFF1-209ENST00000511996 ABCA6Q8N139 1617 aa23.28■■□□□ 1.32
AFF1-209ENST00000511996 NCOA1Q15788 1441 aa23.27■■□□□ 1.32
AFF1-209ENST00000511996 AGLP35573 1532 aa23.24■■□□□ 1.31
AFF1-209ENST00000511996 CAMSAP1Q5T5Y3 1602 aa23.24■■□□□ 1.31
AFF1-209ENST00000511996 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
AFF1-209ENST00000511996 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
AFF1-209ENST00000511996 MLH3Q9UHC1 1453 aa23.23■■□□□ 1.31
AFF1-209ENST00000511996 CDC42BPBQ9Y5S2 1711 aa23.22■■□□□ 1.31
AFF1-209ENST00000511996 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
AFF1-209ENST00000511996 CLIP1P30622 1438 aa23.21■■□□□ 1.31
AFF1-209ENST00000511996 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
AFF1-209ENST00000511996 MROH2AA6NES4 1674 aa23.19■■□□□ 1.3
AFF1-209ENST00000511996 TROQ12816 1431 aaPredicted RBP23.18■■□□□ 1.3
AFF1-209ENST00000511996 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
AFF1-209ENST00000511996 ZNF335Q9H4Z2 1342 aaPredicted RBP23.15■■□□□ 1.3
AFF1-209ENST00000511996 KIDINS220Q9ULH0 1771 aa23.15■■□□□ 1.3
AFF1-209ENST00000511996 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
AFF1-209ENST00000511996 PREX2Q70Z35 1606 aa23.14■■□□□ 1.29
AFF1-209ENST00000511996 NPATQ14207 1427 aa23.14■■□□□ 1.29
AFF1-209ENST00000511996 LRRIQ1Q96JM4 1722 aa23.13■■□□□ 1.29
AFF1-209ENST00000511996 ABCC1P33527 1531 aa23.13■■□□□ 1.29
AFF1-209ENST00000511996 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
AFF1-209ENST00000511996 PKD2Q13563 968 aa23.08■■□□□ 1.29
AFF1-209ENST00000511996 ZMYM3Q14202 1370 aa23.08■■□□□ 1.29
AFF1-209ENST00000511996 CLTCQ00610 1675 aaKnown RBP23.08■■□□□ 1.29
AFF1-209ENST00000511996 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.28
AFF1-209ENST00000511996 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
AFF1-209ENST00000511996 SCAF1Q9H7N4 1312 aaKnown RBP23.06■■□□□ 1.28
AFF1-209ENST00000511996 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
AFF1-209ENST00000511996 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
AFF1-209ENST00000511996 CDC42BPAQ5VT25 1732 aa23.05■■□□□ 1.28
AFF1-209ENST00000511996 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
AFF1-209ENST00000511996 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
AFF1-209ENST00000511996 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
AFF1-209ENST00000511996 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
AFF1-209ENST00000511996 TCOF1Q13428 1488 aaKnown RBP22.99■■□□□ 1.27
AFF1-209ENST00000511996 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
AFF1-209ENST00000511996 HSPA1LP34931 641 aa22.99■■□□□ 1.27
AFF1-209ENST00000511996 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
AFF1-209ENST00000511996 TOM1O60784 492 aa22.97■■□□□ 1.27
AFF1-209ENST00000511996 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
AFF1-209ENST00000511996 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
AFF1-209ENST00000511996 SPAG9O60271 1321 aaKnown RBP22.95■■□□□ 1.26
AFF1-209ENST00000511996 POLR1AO95602 1720 aaPredicted RBP22.95■■□□□ 1.26
AFF1-209ENST00000511996 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
AFF1-209ENST00000511996 PTPRKQ15262 1439 aa22.93■■□□□ 1.26
AFF1-209ENST00000511996 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
AFF1-209ENST00000511996 GGT6Q6P531 493 aa22.92■■□□□ 1.26
AFF1-209ENST00000511996 CPS1P31327 1500 aa22.91■■□□□ 1.26
AFF1-209ENST00000511996 ATP7AQ04656 1500 aa22.91■■□□□ 1.26
AFF1-209ENST00000511996 A2MP01023 1474 aa22.89■■□□□ 1.25
AFF1-209ENST00000511996 DNMT1P26358 1616 aaKnown RBP22.89■■□□□ 1.25
AFF1-209ENST00000511996 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
AFF1-209ENST00000511996 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■■■■□ 20.4
AFF1-209ENST00000511996 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
AFF1-209ENST00000511996 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
AFF1-209ENST00000511996 INO80Q9ULG1 1556 aaPredicted RBP22.85■■□□□ 1.25
AFF1-209ENST00000511996 SHANK2Q9UPX8 1470 aa22.84■■□□□ 1.25
AFF1-209ENST00000511996 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.25
AFF1-209ENST00000511996 PLEKHH2Q8IVE3 1493 aa22.81■■□□□ 1.24
AFF1-209ENST00000511996 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
AFF1-209ENST00000511996 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
AFF1-209ENST00000511996 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
AFF1-209ENST00000511996 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
AFF1-209ENST00000511996 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms