RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
SUB1-209ENST00000511615 CYB5RLQ6IPT4 315 aa13.65□□□□□ -0.22
SUB1-209ENST00000511615 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
SUB1-209ENST00000511615 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
SUB1-209ENST00000511615 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
SUB1-209ENST00000511615 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
SUB1-209ENST00000511615 NEUROD1Q13562 356 aa13.63□□□□□ -0.23
SUB1-209ENST00000511615 GPATCH8Q9UKJ3 1502 aaKnown RBP13.63□□□□□ -0.23
SUB1-209ENST00000511615 MIER1Q8N108 512 aa13.63□□□□□ -0.23
SUB1-209ENST00000511615 ZCCHC11Q5TAX3 1644 aaKnown RBP13.62□□□□□ -0.23
SUB1-209ENST00000511615 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
SUB1-209ENST00000511615 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
SUB1-209ENST00000511615 WDR7Q9Y4E6 1490 aa13.59□□□□□ -0.23
SUB1-209ENST00000511615 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
SUB1-209ENST00000511615 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
SUB1-209ENST00000511615 KIF14Q15058 1648 aa13.58□□□□□ -0.24
SUB1-209ENST00000511615 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
SUB1-209ENST00000511615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.242e-8■■■■□ 20.6
SUB1-209ENST00000511615 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
SUB1-209ENST00000511615 PLCH2O75038 1416 aa13.55□□□□□ -0.24
SUB1-209ENST00000511615 RSPH4AQ5TD94 716 aa13.54□□□□□ -0.24
SUB1-209ENST00000511615 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
SUB1-209ENST00000511615 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
SUB1-209ENST00000511615 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.24
SUB1-209ENST00000511615 EFCAB2Q5VUJ9 269 aa13.51□□□□□ -0.25
SUB1-209ENST00000511615 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
SUB1-209ENST00000511615 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
SUB1-209ENST00000511615 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
SUB1-209ENST00000511615 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
SUB1-209ENST00000511615 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
SUB1-209ENST00000511615 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
SUB1-209ENST00000511615 ABCA9Q8IUA7 1624 aa13.49□□□□□ -0.25
SUB1-209ENST00000511615 ABCC5O15440 1437 aa13.49□□□□□ -0.25
SUB1-209ENST00000511615 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
SUB1-209ENST00000511615 CDC42BPAQ5VT25 1732 aa13.48□□□□□ -0.25
SUB1-209ENST00000511615 NAIPQ13075 1403 aa13.48□□□□□ -0.25
SUB1-209ENST00000511615 AKNAQ7Z591 1439 aa13.48□□□□□ -0.25
SUB1-209ENST00000511615 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
SUB1-209ENST00000511615 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
SUB1-209ENST00000511615 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
SUB1-209ENST00000511615 ROCK1Q13464 1354 aa13.47□□□□□ -0.25
SUB1-209ENST00000511615 CAMSAP2Q08AD1 1489 aa13.46□□□□□ -0.25
SUB1-209ENST00000511615 PLEKHH2Q8IVE3 1493 aa13.46□□□□□ -0.25
SUB1-209ENST00000511615 PREX2Q70Z35 1606 aa13.46□□□□□ -0.25
SUB1-209ENST00000511615 TONSLQ96HA7 1378 aa13.46□□□□□ -0.25
SUB1-209ENST00000511615 DAPK1P53355 1430 aa13.45□□□□□ -0.26
SUB1-209ENST00000511615 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
SUB1-209ENST00000511615 CDC42BPBQ9Y5S2 1711 aa13.45□□□□□ -0.26
SUB1-209ENST00000511615 GLI2P10070 1586 aa13.45□□□□□ -0.26
SUB1-209ENST00000511615 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
SUB1-209ENST00000511615 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.261e-10■■■■■ 32.4
SUB1-209ENST00000511615 ARHGAP5Q13017 1502 aa13.42□□□□□ -0.26
SUB1-209ENST00000511615 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
SUB1-209ENST00000511615 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
SUB1-209ENST00000511615 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
SUB1-209ENST00000511615 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
SUB1-209ENST00000511615 NCOA1Q15788 1441 aa13.41□□□□□ -0.26
SUB1-209ENST00000511615 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
SUB1-209ENST00000511615 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
SUB1-209ENST00000511615 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
SUB1-209ENST00000511615 FANCAO15360 1455 aa13.4□□□□□ -0.26
SUB1-209ENST00000511615 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
SUB1-209ENST00000511615 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
SUB1-209ENST00000511615 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
SUB1-209ENST00000511615 RRP7BPQ9NSQ0 103 aa13.39□□□□□ -0.27
SUB1-209ENST00000511615 GCC2Q8IWJ2 1684 aa13.38□□□□□ -0.27
SUB1-209ENST00000511615 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
SUB1-209ENST00000511615 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
SUB1-209ENST00000511615 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
SUB1-209ENST00000511615 NEO1Q92859 1461 aa13.37□□□□□ -0.27
SUB1-209ENST00000511615 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
SUB1-209ENST00000511615 ABCC1P33527 1531 aa13.36□□□□□ -0.27
SUB1-209ENST00000511615 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
SUB1-209ENST00000511615 C9orf84Q5VXU9 1444 aa13.35□□□□□ -0.27
SUB1-209ENST00000511615 DIP2BQ9P265 1576 aa13.35□□□□□ -0.27
SUB1-209ENST00000511615 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
SUB1-209ENST00000511615 SCAPERQ9BY12 1400 aa13.34□□□□□ -0.27
SUB1-209ENST00000511615 TRAPPC8Q9Y2L5 1435 aa13.34□□□□□ -0.27
SUB1-209ENST00000511615 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
SUB1-209ENST00000511615 MAST1Q9Y2H9 1570 aa13.33□□□□□ -0.27
SUB1-209ENST00000511615 SYCP2Q9BX26 1530 aa13.33□□□□□ -0.28
SUB1-209ENST00000511615 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
SUB1-209ENST00000511615 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
SUB1-209ENST00000511615 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
SUB1-209ENST00000511615 SPAG9O60271 1321 aaKnown RBP13.3□□□□□ -0.28
SUB1-209ENST00000511615 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
SUB1-209ENST00000511615 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
SUB1-209ENST00000511615 ANP32CO43423 234 aa13.29□□□□□ -0.28
SUB1-209ENST00000511615 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
SUB1-209ENST00000511615 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
SUB1-209ENST00000511615 ZNF518AQ6AHZ1 1483 aa13.28□□□□□ -0.28
SUB1-209ENST00000511615 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
SUB1-209ENST00000511615 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
SUB1-209ENST00000511615 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.28
SUB1-209ENST00000511615 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
SUB1-209ENST00000511615 DENND4BO75064 1496 aaPredicted RBP13.26□□□□□ -0.29
SUB1-209ENST00000511615 PLXNC1O60486 1568 aa13.25□□□□□ -0.29
SUB1-209ENST00000511615 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
SUB1-209ENST00000511615 KDM5CP41229 1560 aa13.24□□□□□ -0.29
SUB1-209ENST00000511615 KDM6BO15054 1643 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms